DY259864

Overview
NameDY259864
Unique NameDY259864
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length941
Libraries
Library NameType
Fruit-TFcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY259864 vs. ExPASy Swiss-Prot
Match: MDO1_PSEMR (Macrodontain-1 OS=Pseudananas macrodontes PE=1 SV=1)

HSP 1 Score: 103.605 bits (257), Expect = 1.708e-21
Identity = 43/96 (44.79%), Postives = 65/96 (67.71%), Query Frame = 2
Query:  377 PSSLDWRKRGIVTPVKDQGSCGSCWSFSTTGAIEGINALVTGDLISLSEQELVDCDTTSCGCDGGYMDYAFEWVINHGGIHPESDYPYPGVDGTCN 664
            P S+DWR  G V  VK+QG CG CW+F+    +EGI  +  G+L+ LSEQE++DC   S GC GG+++ A++++I++ G+  + +YPY    GTCN
Sbjct:    3 PQSIDWRDYGAVNEVKNQGPCGGCWAFAAIATVEGIYKIRKGNLVYLSEQEVLDC-AVSYGCKGGWVNRAYDFIISNNGVTTDENYPYRAYQGTCN 97          
BLAST of DY259864 vs. ExPASy Swiss-Prot
Match: CPP1_ENTHI (Cysteine proteinase 1 OS=Entamoeba histolytica GN=CPP1 PE=1 SV=1)

HSP 1 Score: 102.064 bits (253), Expect = 4.970e-21
Identity = 64/191 (33.51%), Postives = 97/191 (50.79%), Query Frame = 2
Query:  110 FQRWKDKHGKAYKHTEEAERRFRNFKNNLEYVVEKKNNPGGHVVGLNKFADMSNEEFREIYLKKIQKPIGKAIGNAKSNLHKTVQSCEAPSSLDWRKRGIVTPVKDQGSCGSCWSFSTTGAIEGINALVTG---DLISLSEQELVDC--DTTSCGCDGGYMDYAFEWVINHGGIHPESDYPYPGVDGTCNT 667
            F  W   + K +   E   RR   F  N   V E        +     FA M+NEE+  + LK       K  G  K  +     + +AP ++DWRK+G VTP++DQG+CGSC++F +  A+EG   +  G   + + LSE+ +V C  +  + GC+GG     + +++ + GI  ESDYPY G D TC +
Sbjct:   16 FNTWVANNNKHFTAVESLRRR-AIFNMNARIVAENNRKETFKLSVDGPFAAMTNEEYNSL-LKL------KRSGEEKGEVRYL--NIQAPKAVDWRKKGKVTPIRDQGNCGSCYTFGSIAALEGRLLIEKGGDSETLDLSEEHMVQCTREDGNNGCNGGLGSNVYNYIMEN-GIAKESDYPYTGSDSTCRS 195          
BLAST of DY259864 vs. ExPASy Swiss-Prot
Match: CATL3_PARTE (Putative cathepsin L 3 OS=Paramecium tetraurelia GN=GSPATT00022199001 PE=2 SV=2)

HSP 1 Score: 100.523 bits (249), Expect = 1.446e-20
Identity = 64/197 (32.49%), Postives = 102/197 (51.78%), Query Frame = 2
Query:  110 FQRWKDKHGKAYKHTEEAERRFRNFKNNLEYVVEKKNNPGG--HVVGLNKFADMSNEEFREIYLKKIQKPIGKAIGNAKSNLHKTVQSCEAPSSLDWRKRGIVTPVKDQGSCGSCWSFSTTGAIEGINALVTGDLISLSEQELVDCDTTSCGCDGGYMDYAFEWVINHGGIHPESDYPYPGVDGTCNTPRRKPKFVS 694
            F+RW  K+ K Y  +E+  R      N+ + ++E+ N      + +G N+F  +S+EEF ++YL+K    +     N        VQ  E   ++DWR     T VK+QG C S W+FS + ++E   A+     I+ S Q++VDCD  + GC GGY  YA E+V+   G+   ++YPY   + TC   R    F++
Sbjct:   29 FERWALKNNKFYTESEKLYRM--EIYNSNKRMIEEHNQREDVTYQMGENQFMTLSHEEFVDLYLQKSDSSV-----NIMGASLPEVQ-LEGLGAVDWRN---YTTVKEQGQCASGWAFSVSNSLEAWYAIRGFQKINASTQQIVDCDYNNTGCSGGYNAYAMEYVL-RVGLVSSTNYPYVAKNQTCKQSRNGTYFIN 213          
BLAST of DY259864 vs. ExPASy Swiss-Prot
Match: CATW_FELCA (Cathepsin W OS=Felis catus GN=CTSW PE=2 SV=2)

HSP 1 Score: 99.3673 bits (246), Expect = 3.221e-20
Identity = 60/191 (31.41%), Postives = 99/191 (51.83%), Query Frame = 2
Query:   92 ERVFELFQRWKDKHGKAYKHTEEAERRFRNFKNNLEYVVE-KKNNPGGHVVGLNKFADMSNEEFREIY----LKKIQKPIGKAIGNAKSNLHKTVQSCEAPSSLDWRKR-GIVTPVKDQGSCGSCWSFSTTGAIEGINALVTGDLISLSEQELVDCDTTSCGCDGGYMDYAFEWVINHGGIHPESDYPYPG 646
            ++ F LFQ    ++ ++Y + EE  RR   F +NL    + ++ + G    G+  F+D++ EEF  +Y    +      +G+ +G+ +            P + DWRK  G+++ VK Q SC  CW+ +  G IE + A+     + LS QEL+DC     GC GG++  AF  V+N+ G+  E DYP+ G
Sbjct:   39 KQAFTLFQI---QYNRSYSNPEEYARRLDIFAHNLAQAQQLEEEDLGTAEFGVTPFSDLTEEEFGRLYGHRRMDGEAPKVGREVGSEEWGE-------SVPPTCDWRKLDGVISSVKKQESCSCCWAMAAAGNIEALWAIKYRQSVELSVQELLDCGRCGDGCRGGFVWDAFITVLNNSGLASEKDYPFQG 219          
BLAST of DY259864 vs. ExPASy Swiss-Prot
Match: CATW_HUMAN (Cathepsin W OS=Homo sapiens GN=CTSW PE=1 SV=2)

HSP 1 Score: 97.8265 bits (242), Expect = 9.372e-20
Identity = 59/187 (31.55%), Postives = 98/187 (52.41%), Query Frame = 2
Query:  104 ELFQRWKDKHGKAYKHTEEAERRFRNFKNNLEYVVE-KKNNPGGHVVGLNKFADMSNEEFREIYLKKIQKPIGKAIGNAKSNLHKTVQSCE----APSSLDWRK-RGIVTPVKDQGSCGSCWSFSTTGAIEGINALVTGDLISLSEQELVDCDTTSCGCDGGYMDYAFEWVINHGGIHPESDYPYPG 646
            E F+ ++ +  ++Y   EE   R   F +NL      ++ + G    G+  F+D++ EEF ++Y  +      +A G   S + + ++S E     P S DWRK    ++P+KDQ +C  CW+ +  G IE +  +   D + +S QEL+DC     GC GG++  AF  V+N+ G+  E DYP+ G
Sbjct:   40 EAFKLFQIQFNRSYLSPEEHAHRLDIFAHNLAQAQRLQEEDLGTAEFGVTPFSDLTEEEFGQLYGYR------RAAGGVPS-MGREIRSEEPEESVPFSCDWRKVASAISPIKDQKNCNCCWAMAAAGNIETLWRISFWDFVDVSVQELLDCGRCGDGCHGGFVWDAFITVLNNSGLASEKDYPFQG 219          
BLAST of DY259864 vs. ExPASy Swiss-Prot
Match: PEPT1_DERFA (Peptidase 1 OS=Dermatophagoides farinae GN=DERF1 PE=1 SV=2)

HSP 1 Score: 95.9005 bits (237), Expect = 3.561e-19
Identity = 63/190 (33.16%), Postives = 91/190 (47.89%), Query Frame = 2
Query:  110 FQRWKDKHGKAYKHTEEAERRFRNFKNNLEYVVEKKNNPGGHVVGLNKFADMSNEEFREIYL---KKIQKPIGKAIGNAKSNLHKTVQSCEAPSSLDWRKRGIVTPVKDQGSCGSCWSFSTTGAIEGINALVTGDLISLSEQELVDCDTTSCGCDGGYMDYAFEWVINHGGIHPESDYPYPGVDGTCNTP 670
            F+ +K    K Y   EE E   +NF  +L+YV   K         +N  +D+S +EF+  YL   +  ++   +   NA+++  + + S   PS LD R    VTP++ QG CGSCW+FS   A E          + LSEQELVDC  +  GC G  +    E+ I   G+  E  YPY   +  C  P
Sbjct:   26 FEEFKKAFNKNYATVEEEEVARKNFLESLKYVEANKG-------AINHLSDLSLDEFKNRYLMSAEAFEQLKTQFDLNAETSACR-INSVNVPSELDLRSLRTVTPIRMQGGCGSCWAFSGVAATESAYLAYRNTSLDLSEQELVDC-ASQHGCHGDTIPRGIEY-IQQNGVVEERSYPYVAREQRCRRP 205          
BLAST of DY259864 vs. ExPASy Swiss-Prot
Match: PEPT1_PSOOV (Peptidase 1 OS=Psoroptes ovis PE=1 SV=1)

HSP 1 Score: 95.1301 bits (235), Expect = 6.075e-19
Identity = 72/206 (34.95%), Postives = 104/206 (50.49%), Query Frame = 2
Query:   80 FVSEERVFELFQRWKDKHGKAYKHTEEAERRFR-NFKNNLEYVVEKKNNPGGHVVGLNKFADMSNEEFREIYLKKIQKPIGKAIGNAKSNLHKTVQSCEA-----PSSLDWRKRGIVTPVKDQGSCGSCWSFSTTGAIEGINALVTGDLISLSEQELVDCDTTSCGCDGGYMDYAFEWVINHGGIHPESDYPYPGVDGTCNTPRRK 679
            + SE R FE F++  +KH      T EAE+  R NF  +LE++  +K   G     +N+F+DMS EEF+  YL   Q    +A+   + +L    Q+C+      P+ +D R  G VT +K+Q +CGSCW+FS    +E          + LSEQELVDC  +  GC G  +     + I   G+  E  YPY   +G C  P  K
Sbjct:   19 YPSEIRTFEEFKKAFNKHYV----TPEAEQEARQNFLASLEHI--EKAGKGR----INQFSDMSLEEFKNQYLMSDQAY--EAL-KKEFDLDAGAQACQIGAVNIPNEIDLRALGYVTKIKNQVACGSCWAFSGVATVESNYLSYDNVSLDLSEQELVDC-ASQHGCGGDTVLNGLRY-IQKNGVVEEQSYPYKAREGRCQRPNAK 209          
BLAST of DY259864 vs. ExPASy Swiss-Prot
Match: CATW_MOUSE (Cathepsin W OS=Mus musculus GN=Ctsw PE=2 SV=1)

HSP 1 Score: 95.1301 bits (235), Expect = 6.075e-19
Identity = 53/183 (28.96%), Postives = 95/183 (51.91%), Query Frame = 2
Query:  104 ELFQRWKDKHGKAYKHTEEAERRFRNFKNNLEYVVE-KKNNPGGHVVGLNKFADMSNEEFREIYLKKIQKPIGKAIGNAKSNLHKTVQSCEAPSSLDWRK-RGIVTPVKDQGSCGSCWSFSTTGAIEGINALVTGDLISLSEQELVDCDTTSCGCDGGYMDYAFEWVINHGGIHPESDYPYPG 646
            E+F+ ++ +  ++Y +  E  RR   F +NL      ++ + G    G   F+D++ EEF ++Y    Q+   +   N    +         P + DWRK + I++ VK+QGSC  CW+ +    I+ +  +     + +S QEL+DC+    GC+GG++  A+  V+N+ G+  E DYP+ G
Sbjct:   38 EVFKLFQIRFNRSYWNPAEYTRRLSIFAHNLAQAQRLQQEDLGTAEFGETPFSDLTEEEFGQLYG---QERSPERTPNMTKKVESNTWGESVPRTCDWRKAKNIISSVKNQGSCKCCWAMAAADNIQALWRIKHQQFVDVSVQELLDCERCGNGCNGGFVWDAYLTVLNNSGLASEKDYPFQG 217          
BLAST of DY259864 vs. ExPASy Swiss-Prot
Match: PEPT1_DERPT (Peptidase 1 OS=Dermatophagoides pteronyssinus GN=DERP1 PE=1 SV=2)

HSP 1 Score: 93.9745 bits (232), Expect = 1.353e-18
Identity = 61/193 (31.61%), Postives = 97/193 (50.26%), Query Frame = 2
Query:  110 FQRWKDKHGKAYKHTEEAERRFRNFKNNLEYVVEKKNNPGGHVVGLNKFADMSNEEFREIYLKKIQKPIGKAIGNAKS--NLHKTVQSCE----APSSLDWRKRGIVTPVKDQGSCGSCWSFSTTGAIEGINALVTGDLISLSEQELVDCDTTSCGCDGGYMDYAFEWVINHGGIHPESDYPYPGVDGTCNTP 670
            F+ +K    K+Y   E+ E   +NF  +++YV   ++N G     +N  +D+S +EF+  +L   +     A  + K+  +L+    +C     AP+ +D R+   VTP++ QG CGSCW+FS   A E          + L+EQELVDC  +  GC G  +    E+ I H G+  ES Y Y   + +C  P
Sbjct:   26 FEEYKKAFNKSYATFEDEEAARKNFLESVKYV---QSNGGA----INHLSDLSLDEFKNRFLMSAE-----AFEHLKTQFDLNAETNACSINGNAPAEIDLRQMRTVTPIRMQGGCGSCWAFSGVAATESAYLAYRNQSLDLAEQELVDC-ASQHGCHGDTIPRGIEY-IQHNGVVQESYYRYVAREQSCRRP 204          
BLAST of DY259864 vs. ExPASy Swiss-Prot
Match: CATO_HUMAN (Cathepsin O OS=Homo sapiens GN=CTSO PE=1 SV=1)

HSP 1 Score: 92.8189 bits (229), Expect = 3.015e-18
Identity = 47/142 (33.10%), Postives = 77/142 (54.23%), Query Frame = 2
Query:  242 GLNKFADMSNEEFREIYLKKIQKPIGKAIGNAKSNLHKTVQSCEAPSSLDWRKRGIVTPVKDQGSCGSCWSFSTTGAIEGINALVTGDLISLSEQELVDCDTTSCGCDGGYMDYAFEWVIN-HGGIHPESDYPYPGVDGTCN 664
            G+N+F+ +  EEF+ IYL+   KP         + +H ++ +   P   DWR + +VT V++Q  CG CW+FS  GA+E   A+    L  LS Q+++DC   + GC+GG    A  W+      +  +S+YP+   +G C+
Sbjct:   68 GINQFSYLFPEEFKAIYLRS--KP--SKFPRYSAEVHMSIPNVSLPLRFDWRDKQVVTQVRNQQMCGGCWAFSVVGAVESAYAIKGKPLEDLSVQQVIDCSYNNYGCNGGSTLNALNWLNKMQVKLVKDSEYPFKAQNGLCH 205          
The following BLAST results are available for this feature:
BLAST of DY259864 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 159
Match NameE-valueIdentityDescription
MDO1_PSEMR1.708e-2144.79Macrodontain-1 OS=Pseudananas macrodontes PE=1 SV=... [more]
CPP1_ENTHI4.970e-2133.51Cysteine proteinase 1 OS=Entamoeba histolytica GN=... [more]
CATL3_PARTE1.446e-2032.49Putative cathepsin L 3 OS=Paramecium tetraurelia G... [more]
CATW_FELCA3.221e-2031.41Cathepsin W OS=Felis catus GN=CTSW PE=2 SV=2[more]
CATW_HUMAN9.372e-2031.55Cathepsin W OS=Homo sapiens GN=CTSW PE=1 SV=2[more]
PEPT1_DERFA3.561e-1933.16Peptidase 1 OS=Dermatophagoides farinae GN=DERF1 P... [more]
PEPT1_PSOOV6.075e-1934.95Peptidase 1 OS=Psoroptes ovis PE=1 SV=1[more]
CATW_MOUSE6.075e-1928.96Cathepsin W OS=Mus musculus GN=Ctsw PE=2 SV=1[more]
PEPT1_DERPT1.353e-1831.61Peptidase 1 OS=Dermatophagoides pteronyssinus GN=D... [more]
CATO_HUMAN3.015e-1833.10Cathepsin O OS=Homo sapiens GN=CTSO PE=1 SV=1[more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionKN0AAP10YH03FM1 Fruit-TF Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY259864 ID=DY259864; Name=DY259864; organism=Citrus clementina; type=EST; length=941bp
GGTTATTCTTTTCTTGATTTTGGCTTCGGCTACTAGCCTCCCTAGTGAAC
ACTCCATCATTGGTCATGACTTTAATGAGTTTGTTTCAGAGGAGCGGGTA
TTCGAGTTATTTCAACGATGGAAAGATAAGCATGGCAAGGCGTACAAGCA
TACAGAAGAGGCAGAAAGGAGGTTCAGAAATTTTAAGAATAACTTGGAGT
ATGTTGTTGAAAAGAAAAATAATCCTGGTGGGCATGTTGTTGGGTTGAAC
AAGTTTGCTGACATGAGCAATGAGGAGTTTCGAGAAATTTATTTGAAAAA
GATTCAAAAGCCTATTGGCAAAGCGATTGGTAATGCAAAGAGTAACTTGC
ACAAGACGGTACAATCATGCGAAGCACCATCGAGCTTGGATTGGAGGAAA
AGGGGAATCGTTACTCCTGTTAAGGACCAAGGAAGCTGTGGAAGTTGTTG
GTCGTTCTCTACGACTGGAGCCATTGAAGGAATAAATGCCTTGGTCACTG
GAGACCTCATTAGCCTTTCGGAACAAGAACTCGTGGATTGTGATACCACA
AGCTGTGGATGTGATGGAGGCTACATGGATTATGCATTTGAATGGGTTAT
TAACCACGGTGGAATCCACCCAGAATCTGATTATCCTTACCCCGGTGTCG
ATGGTACCTGCAATACCCCAAGGAGGAAACCCAAATTTGTATCATTGATG
GTTATAAAGACGTAGAGCCCCCCATAGTGCTCTGCCATGCGCCGCCGTTC
CCTCCCGATTCGCCCTTGCTTGGTTGGCTCCGCCATCGTTTTTCCCCCTT
TATCCCATGGGACCTTCACCCGGGGCCGGTCCCCCCCCCCCCTTTACCTC
GCCCAGCCGGTTTTCTCTCTCCGCCCTGTCCTTCAAAACGGGAGCAAATC
TTTGCATCTGCACACAATCCATGGGGACACACCTCCGGGGA
back to top