DY259864

Overview
NameDY259864
Unique NameDY259864
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length941
Libraries
Library NameType
Fruit-TFcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY259864 vs. ExPASy Swiss-Prot
Match: CATL2_HUMAN (Cathepsin L2 OS=Homo sapiens GN=CTSL2 PE=1 SV=2)

HSP 1 Score: 135.961 bits (341), Expect = 3.106e-31
Identity = 78/190 (41.05%), Postives = 102/190 (53.68%), Query Frame = 2
Query:  116 RWKDKHGKAYKHTEEAERRF---RNFKNNLEYVVEKKNNPGGHVVGLNKFADMSNEEFREIYLKKIQKPIGKAIGNAKSNLHKTVQS---CEAPSSLDWRKRGIVTPVKDQGSCGSCWSFSTTGAIEGINALVTGDLISLSEQELVDCDTT--SCGCDGGYMDYAFEWVINHGGIHPESDYPYPGVDGTC 661
            +WK  H + Y   EE  RR    +N K    +  E      G  + +N F DM+NEEFR++              N K    K  +     + P S+DWRK+G VTPVK+Q  CGSCW+FS TGA+EG     TG L+SLSEQ LVDC     + GC+GG+M  AF++V  +GG+  E  YPY  VD  C
Sbjct:   31 QWKATHRRLYGANEEGWRRAVWEKNMKMIELHNGEYSQGKHGFTMAMNAFGDMTNEEFRQMM---------GCFRNQKFRKGKVFREPLFLDLPKSVDWRKKGYVTPVKNQKQCGSCWAFSATGALEGQMFRKTGKLVSLSEQNLVDCSRPQGNQGCNGGFMARAFQYVKENGGLDSEESYPYVAVDEIC 211          
BLAST of DY259864 vs. ExPASy Swiss-Prot
Match: CRUST_PANBO (Crustapain OS=Pandalus borealis GN=Cys PE=1 SV=1)

HSP 1 Score: 135.576 bits (340), Expect = 4.056e-31
Identity = 73/192 (38.02%), Postives = 113/192 (58.85%), Query Frame = 2
Query:  110 FQRWKDKHGKAYKHTEEAERRFRNFKNNLEYVVEKKNN-PGGHV---VGLNKFADMSNEEF--REIYLKKIQKPIGKAIGNAKSNLHKTVQSCEAPSSLDWRKRGIVTPVKDQGSCGSCWSFSTTGAIEGINALVTGDLISLSEQELVDCDTT--SCGCDGGYMDYAFEWVINHGGIHPESDYPYPGVDGTC 661
            ++ +K K GK Y ++EE   R   F + L+++ E       G V   + +N F+D+++EE    +  + + + P+        S L K+  +    + +DWR +G VTPVKDQG CGSCW+FS   A+EG + L TGDL+SLSEQ LVDC ++  + GC+GG+   A++++I + GI  ES YPY  +D  C
Sbjct:   20 WENFKTKFGKKYANSEEESHRMSVFMDKLKFIQEHNERYDKGEVTYWLKINNFSDLTHEEVLATKTGMTRRRHPL--------SVLPKSAPTTPMAADVDWRNKGAVTPVKDQGQCGSCWAFSAVAALEGAHFLKTGDLVSLSEQNLVDCSSSYGNQGCNGGWPYQAYQYIIANRGIDTESSYPYKAIDDNC 203          
BLAST of DY259864 vs. ExPASy Swiss-Prot
Match: CYSP3_HOMAM (Digestive cysteine proteinase 3 OS=Homarus americanus GN=LCP3 PE=2 SV=1)

HSP 1 Score: 135.191 bits (339), Expect = 5.297e-31
Identity = 76/192 (39.58%), Postives = 112/192 (58.33%), Query Frame = 2
Query:  110 FQRWKDKHGKAYKHTEEAERRFRNFKNNLEYVVE-KKNNPGGHV---VGLNKFADMSNEEFREIY--LKKIQKPIGKAIGNAKSNLHKTVQSCEAPSSLDWRKRGIVTPVKDQGSCGSCWSFSTTGAIEGINALVTGDLISLSEQELVDCDTT--SCGCDGGYMDYAFEWVINHGGIHPESDYPYPGVDGTC 661
            +  +K ++G+ Y   +E   R R F+ N + + +  K    G V   V +N+F DM+NEEF  +    KK  +   KA+  A++            + +DWR + +VTPVKDQ  CGSCW+FS TGA+EG + L   +L+SLSEQ+LVDC T   + GC GG+M  AF+++ ++GGI  ES YPY   D +C
Sbjct:   20 WDHFKTQYGRKYGDAKEELYRQRVFQQNEQLIEDFNKKFENGEVTFKVAMNQFGDMTNEEFNAVMKGYKKGSRGEPKAVFTAEAG--------PMAADVDWRTKALVTPVKDQEQCGSCWAFSATGALEGQHFLKNDELVSLSEQQLVDCSTDYGNDGCGGGWMTSAFDYIKDNGGIDTESSYPYEAEDRSC 203          
BLAST of DY259864 vs. ExPASy Swiss-Prot
Match: CYSP1_LEIPI (Cysteine proteinase 1 OS=Leishmania pifanoi GN=CYS1 PE=2 SV=2)

HSP 1 Score: 135.191 bits (339), Expect = 5.297e-31
Identity = 74/184 (40.22%), Postives = 104/184 (56.52%), Query Frame = 2
Query:  119 WKDKHGKAYKHTEEAERRFRNFKNNLE--YVVEKKNNPGGHVVGLNKFADMSNEEFREIYLKKIQKPIGKAIGNAKSNLHKTVQSCEAPSSLDWRKRGIVTPVKDQGSCGSCWSFSTTGAIEGINALVTGDLISLSEQELVDCDTTSCGCDGGYMDYAFEWVI--NHGGIHPESDYPYPGVDGT 658
            +K +HGKA+    E   RF  FK N++  Y +  +N P  H     KFAD++ +EF ++YL        + + + K ++H    +     S+DWR +G VTPVK+QG CGSCW+FS  G IEG  A     L+SLSEQ LV CD    GC+GG MD A  W++  ++G +  E+ YPY    GT
Sbjct:   45 FKKRHGKAFGGDAEEGHRFNAFKQNMQTAYFLNTQN-PHAHYDVSGKFADLTPQEFAKLYLNPDY--YARHLKDHKEDVHVDDSAPSGVMSVDWRDKGAVTPVKNQGLCGSCWAFSAIGNIEGQWAASGHSLVSLSEQMLVSCDNIDEGCNGGLMDQAMNWIMQSHNGSVFTEASYPYTSGGGT 225          
BLAST of DY259864 vs. ExPASy Swiss-Prot
Match: CATLL_PHACE (Cathepsin L-like proteinase OS=Phaedon cochleariae PE=2 SV=1)

HSP 1 Score: 135.191 bits (339), Expect = 5.297e-31
Identity = 73/205 (35.61%), Postives = 118/205 (57.56%), Query Frame = 2
Query:  104 ELFQRWKDKHGKAYKHTEEAERRFRNFKNNL----EYVVEKKNNPGGHVVGLNKFADMSNEEFREIYLK-KIQKPIGKAIGNAKSNLHKTVQSCEAPSSLDWRKRGIVTPVKDQGSCGSCWSFSTTGAIEGINALVTGDLISLSEQELVDCDTT--SCGCDGGYMDYAFEWVINHGGIHPESDYPYPGVDGTCNTPRRKPKFVSL 697
            EL+  +K  H + YK   E + RF  F++ L    E+ V+ +N    + + +NKF+D+++EEFR++ +K +  +P  + +  A   +        AP S+DWR +G+V PV++QG CGSCW+ ST  AIE  +A+ +G  + LS Q+LVDC T+  + GC+GG+    FE+V    G+  ++DYPY G +  C    +    V L
Sbjct:   21 ELWADFKKTHARTYKSLREEKLRFNIFQDTLRQIAEHNVKYENGESTYYLAINKFSDITDEEFRDMLMKNEASRPNLEGLEVADLTVGA------APESIDWRSKGVVLPVRNQGECGSCWALSTAAAIESQSAIKSGSKVPLSPQQLVDCSTSYGNHGCNGGFAVNGFEYV-KDNGLESDADYPYSGKEDKCKANDKSRSVVEL 218          
BLAST of DY259864 vs. ExPASy Swiss-Prot
Match: CATV_NPVHC (Viral cathepsin OS=Hyphantria cunea nuclear polyhedrosis virus GN=VCATH PE=3 SV=1)

HSP 1 Score: 134.806 bits (338), Expect = 6.918e-31
Identity = 72/188 (38.30%), Postives = 103/188 (54.79%), Query Frame = 2
Query:  110 FQRWKDKHGKAYKHTEEAERRFRNFKNNLEYVVEKKNNPGGHVVGLNKFADMSNEEFREIYLKKIQKPIGKAIGNAKSNLHKTV----QSCEAPSSLDWRKRGIVTPVKDQGSCGSCWSFSTTGAIEGINALVTGDLISLSEQELVDCDTTSCGCDGGYMDYAFEWVINHGGIHPESDYPYPGVDGTC 661
            F+ +  K  K Y    E  RRF+ F++NLE ++ K  N       +NKF+D+S +E        I K  G A+     N  + V       + P   DWR+   VT VK+QG CG+CW+F+T  ++E   A+    LI+LSEQ+L+DCD    GC+GG +  A+E V+  GG+  E+DYPY G DG C
Sbjct:   28 FEDFLHKFNKHYSSESEKLRRFQIFQHNLEEIIIKNQNDTTAQYEINKFSDLSKDE-------TISKYTGLALPLQTQNFCEVVVLNRPPDKGPLEFDWRRLNKVTSVKNQGICGACWAFATLASLESQFAIKHNQLINLSEQQLIDCDYVDAGCNGGLLHTAYEAVMQMGGVQAENDYPYEGSDGNC 208          
BLAST of DY259864 vs. ExPASy Swiss-Prot
Match: CATS_MOUSE (Cathepsin S OS=Mus musculus GN=Ctss PE=2 SV=1)

HSP 1 Score: 134.806 bits (338), Expect = 6.918e-31
Identity = 77/191 (40.31%), Postives = 111/191 (58.12%), Query Frame = 2
Query:  119 WKDKHGKAYKHTEEAERRFRNFKNNLEYVV--EKKNNPGGHV--VGLNKFADMSNEEFR-EIYLKKIQKPIGKAIGNAKSNLHKTVQSCEAPSSLDWRKRGIVTPVKDQGSCGSCWSFSTTGAIEGINALVTGDLISLSEQELVDCDTT----SCGCDGGYMDYAFEWVINHGGIHPESDYPYPGVDGTCN 664
            WK  H K YK   E E R   ++ NL++++    + + G H   VG+N   DM+NEE    +   +I +   K +   +S  ++T+     P ++DWR++G VT VK QGSCG+CW+FS  GA+EG   L TG LISLS Q LVDC       + GC GGYM  AF+++I++GGI  ++ YPY   D  C+
Sbjct:   39 WKKTHEKEYKDKNEEEVRRLIWEKNLKFIMIHNLEYSMGMHTYQVGMNDMGDMTNEEISCRMGALRISRQSPKTV-TFRSYSNRTL-----PDTVDWREKGCVTEVKYQGSCGACWAFSAVGALEGQLKLKTGKLISLSAQNLVDCSNEEKYGNKGCGGGYMTEAFQYIIDNGGIEADASYPYKATDEKCH 223          
BLAST of DY259864 vs. ExPASy Swiss-Prot
Match: CATF_MOUSE (Cathepsin F OS=Mus musculus GN=Ctsf PE=2 SV=1)

HSP 1 Score: 134.806 bits (338), Expect = 6.918e-31
Identity = 84/220 (38.18%), Postives = 115/220 (52.27%), Query Frame = 2
Query:   11 FLILASATSLPSEHSIIGHDFNEFVSEERVFELFQRWKDKHGKAYKHTEEAERRFRNFKNNLEYVVE-KKNNPGGHVVGLNKFADMSNEEFREIYLKKI-QKPIGKAIGNAKSNLHKTVQSCEAPSSLDWRKRGIVTPVKDQGSCGSCWSFSTTGAIEGINALVTGDLISLSEQELVDCDTTSCGCDGGYMDYAFEWVINHGGIHPESDYPYPGVDGTCN 664
            FL L     LP + S+            ++  LF+ +   + + Y+  EEA+ R   F  N+    + +  + G    G+ KF+D++ EEF  IYL  + QK  G+ +  AKS       +  AP   DWRK+G VT VK+QG CGSCW+FS TG +EG   L  G L+SLSEQEL+DCD     C GG    A+  + N GG+  E DY Y G   TCN
Sbjct:  144 FLPLLDKDPLPQDFSV------------KMAPLFKDFMTTYNRTYESREEAQWRLTVFARNMIRAQKIQALDRGTAQYGITKFSDLTEEEFHTIYLNPLLQKESGRKMSPAKSI------NDLAPPEWDWRKKGAVTEVKNQGMCGSCWAFSVTGNVEGQWFLNRGTLLSLSEQELLDCDKVDKACLGGLPSNAYAAIKNLGGLETEDDYGYQGHVQTCN 345          
BLAST of DY259864 vs. ExPASy Swiss-Prot
Match: CYSP_TRYCR (Cruzipain OS=Trypanosoma cruzi PE=1 SV=1)

HSP 1 Score: 134.42 bits (337), Expect = 9.036e-31
Identity = 77/200 (38.50%), Postives = 105/200 (52.50%), Query Frame = 2
Query:   86 SEERVFELFQRWKDKHGKAYKHTEEAERRFRNFKNNLEYV-VEKKNNPGGHVVGLNKFADMSNEEFREIYLKKIQKPIGKAIGNAKSNLHKTVQSCEAPSSLDWRKRGIVTPVKDQGSCGSCWSFSTTGAIEGINALVTGDLISLSEQELVDCDTTSCGCDGGYMDYAFEWVI--NHGGIHPESDYPY---PGVDGTCNT 667
            +EE +   F  +K KHG+ Y+   E   R   F+ NL    +    NP     G+  F+D++ EEFR  Y          A    ++ +   V+   AP+++DWR RG VT VKDQG CGSCW+FS  G +E    L    L +LSEQ LV CD T  GC GG M+ AFEW++  N+G ++ E  YPY    G+   C T
Sbjct:   30 AEETLTSQFAEFKQKHGRVYESAAEEAFRLSVFRENLFLARLHAAANPHA-TFGVTPFSDLTREEFRSRYHNGAAH---FAAAQERARVPVKVEVVGAPAAVDWRARGAVTAVKDQGQCGSCWAFSAIGNVECQWFLAGHPLTNLSEQMLVSCDKTDSGCSGGLMNNAFEWIVQENNGAVYTEDSYPYASGEGISPPCTT 225          
BLAST of DY259864 vs. ExPASy Swiss-Prot
Match: CATH_PIG (Cathepsin H OS=Sus scrofa GN=CTSH PE=1 SV=1)

HSP 1 Score: 134.42 bits (337), Expect = 9.036e-31
Identity = 79/189 (41.80%), Postives = 107/189 (56.61%), Query Frame = 2
Query:  110 FQRWKDKHGKAYKHTEEAERRFRNFKNNLEYVVEKKNNPGGHV--VGLNKFADMSNEEFREIYLKKIQKPIGKAIGNAKSNLHKTVQSCEAPSSLDWRKRG-IVTPVKDQGSCGSCWSFSTTGAIEGINALVTGDLISLSEQELVDC--DTTSCGCDGGYMDYAFEWVINHGGIHPESDYPYPGVDGTC 661
            F+ W  +H K Y   EE   R + F +N   +    +N G H   +GLN+F+DMS +E R  YL    +      GN          +   P S+DWRK+G  V+PVK+QGSCGSCW+FSTTGA+E   A+ TG ++SL+EQ+LVDC  +  + GC GG    AFE++  + GI  E  YPY G D  C
Sbjct:   35 FKSWMVQHQKKYS-LEEYHHRLQVFVSNWRKI--NAHNAGNHTFKLGLNQFSDMSFDEIRHKYLWSEPQNCSATKGNYLRG------TGPYPPSMDWRKKGNFVSPVKNQGSCGSCWTFSTTGALESAVAIATGKMLSLAEQQLVDCAQNFNNHGCQGGLPSQAFEYIRYNKGIMGEDTYPYKGQDDHC 214          
The following BLAST results are available for this feature:
BLAST of DY259864 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 159
Match NameE-valueIdentityDescription
CATL2_HUMAN3.106e-3141.05Cathepsin L2 OS=Homo sapiens GN=CTSL2 PE=1 SV=2[more]
CRUST_PANBO4.056e-3138.02Crustapain OS=Pandalus borealis GN=Cys PE=1 SV=1[more]
CYSP3_HOMAM5.297e-3139.58Digestive cysteine proteinase 3 OS=Homarus america... [more]
CYSP1_LEIPI5.297e-3140.22Cysteine proteinase 1 OS=Leishmania pifanoi GN=CYS... [more]
CATLL_PHACE5.297e-3135.61Cathepsin L-like proteinase OS=Phaedon cochleariae... [more]
CATV_NPVHC6.918e-3138.30Viral cathepsin OS=Hyphantria cunea nuclear polyhe... [more]
CATS_MOUSE6.918e-3140.31Cathepsin S OS=Mus musculus GN=Ctss PE=2 SV=1[more]
CATF_MOUSE6.918e-3138.18Cathepsin F OS=Mus musculus GN=Ctsf PE=2 SV=1[more]
CYSP_TRYCR9.036e-3138.50Cruzipain OS=Trypanosoma cruzi PE=1 SV=1[more]
CATH_PIG9.036e-3141.80Cathepsin H OS=Sus scrofa GN=CTSH PE=1 SV=1[more]

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Properties
Property NameValue
Genbank descriptionKN0AAP10YH03FM1 Fruit-TF Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY259864 ID=DY259864; Name=DY259864; organism=Citrus clementina; type=EST; length=941bp
GGTTATTCTTTTCTTGATTTTGGCTTCGGCTACTAGCCTCCCTAGTGAAC
ACTCCATCATTGGTCATGACTTTAATGAGTTTGTTTCAGAGGAGCGGGTA
TTCGAGTTATTTCAACGATGGAAAGATAAGCATGGCAAGGCGTACAAGCA
TACAGAAGAGGCAGAAAGGAGGTTCAGAAATTTTAAGAATAACTTGGAGT
ATGTTGTTGAAAAGAAAAATAATCCTGGTGGGCATGTTGTTGGGTTGAAC
AAGTTTGCTGACATGAGCAATGAGGAGTTTCGAGAAATTTATTTGAAAAA
GATTCAAAAGCCTATTGGCAAAGCGATTGGTAATGCAAAGAGTAACTTGC
ACAAGACGGTACAATCATGCGAAGCACCATCGAGCTTGGATTGGAGGAAA
AGGGGAATCGTTACTCCTGTTAAGGACCAAGGAAGCTGTGGAAGTTGTTG
GTCGTTCTCTACGACTGGAGCCATTGAAGGAATAAATGCCTTGGTCACTG
GAGACCTCATTAGCCTTTCGGAACAAGAACTCGTGGATTGTGATACCACA
AGCTGTGGATGTGATGGAGGCTACATGGATTATGCATTTGAATGGGTTAT
TAACCACGGTGGAATCCACCCAGAATCTGATTATCCTTACCCCGGTGTCG
ATGGTACCTGCAATACCCCAAGGAGGAAACCCAAATTTGTATCATTGATG
GTTATAAAGACGTAGAGCCCCCCATAGTGCTCTGCCATGCGCCGCCGTTC
CCTCCCGATTCGCCCTTGCTTGGTTGGCTCCGCCATCGTTTTTCCCCCTT
TATCCCATGGGACCTTCACCCGGGGCCGGTCCCCCCCCCCCCTTTACCTC
GCCCAGCCGGTTTTCTCTCTCCGCCCTGTCCTTCAAAACGGGAGCAAATC
TTTGCATCTGCACACAATCCATGGGGACACACCTCCGGGGA
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