DY259864

Overview
NameDY259864
Unique NameDY259864
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length941
Libraries
Library NameType
Fruit-TFcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY259864 vs. ExPASy Swiss-Prot
Match: CATF_HUMAN (Cathepsin F OS=Homo sapiens GN=CTSF PE=1 SV=1)

HSP 1 Score: 134.42 bits (337), Expect = 9.036e-31
Identity = 80/198 (40.40%), Postives = 108/198 (54.55%), Query Frame = 2
Query:   95 RVFELFQRWKDKHGKAYKHTEEAERRFRNFKNNLEYVVE-KKNNPGGHVVGLNKFADMSNEEFREIYLKKIQKPIGKAIGNAKSNLHKTVQSCEAPSSLDWRKRGIVTPVKDQGSCGSCWSFSTTGAIEGINALVTGDLISLSEQELVDCDTTSCGCDGGYMDYAFEWVINHGGIHPESDYPYPGVDGTCNTPRRKPK 685
            ++  +F+ +   + + Y+  EEA  R   F NN+    + +  + G    G+ KF+D++ EEFR IYL  + +   K  GN K    K+V    AP   DWR +G VT VKDQG CGSCW+FS TG +EG   L  G L+SLSEQEL+DCD     C GG    A+  + N GG+  E DY Y G   +CN    K K
Sbjct:  182 KMASIFKNFVITYNRTYESKEEARWRLSVFVNNMVRAQKIQALDRGTAQYGVTKFSDLTEEEFRTIYLNTLLR---KEPGN-KMKQAKSVGDL-APPEWDWRSKGAVTKVKDQGMCGSCWAFSVTGNVEGQWFLNQGTLLSLSEQELLDCDKMDKACMGGLPSNAYSAIKNLGGLETEDDYSYQGHMQSCNFSAEKAK 374          
BLAST of DY259864 vs. ExPASy Swiss-Prot
Match: CATV_NPVOP (Viral cathepsin OS=Orgyia pseudotsugata multicapsid polyhedrosis virus GN=VCATH PE=3 SV=1)

HSP 1 Score: 134.035 bits (336), Expect = 1.180e-30
Identity = 71/188 (37.77%), Postives = 101/188 (53.72%), Query Frame = 2
Query:  110 FQRWKDKHGKAYKHTEEAERRFRNFKNNLEYVVEKKNNPGGHVVGLNKFADMSNEEFREIYLKKIQKPIGKAIGNAKSNLHKTV----QSCEAPSSLDWRKRGIVTPVKDQGSCGSCWSFSTTGAIEGINALVTGDLISLSEQELVDCDTTSCGCDGGYMDYAFEWVINHGGIHPESDYPYPGVDGTC 661
            F+ +  K  K Y    E   RF+ F++NLE ++ K  N       +NKF+D+S EE        I K  G ++ +   N  + V         P   DWR+   VT VK+QG CG+CW+F+T G++E   A+    LI+LSEQ+ +DCD  + GCDGG +  AFE  +  GG+  ESDYPY   +G C
Sbjct:   28 FEDFLHKFNKNYSSESEKLHRFKIFQHNLEEIINKNQNDSTAQYEINKFSDLSKEE-------AISKYTGLSLPHQTQNFCEVVILDRPPDRGPLEFDWRQFNKVTSVKNQGVCGACWAFATLGSLESQFAIKYNRLINLSEQQFIDCDRVNAGCDGGLLHTAFESAMEMGGVQMESDYPYETANGQC 208          
BLAST of DY259864 vs. ExPASy Swiss-Prot
Match: CATV_NPVLD (Viral cathepsin OS=Lymantria dispar multicapsid nuclear polyhedrosis virus GN=VCATH PE=3 SV=1)

HSP 1 Score: 134.035 bits (336), Expect = 1.180e-30
Identity = 82/239 (34.31%), Postives = 123/239 (51.46%), Query Frame = 2
Query:    5 ILFLILASATSLPSEHSIIGHDFNEFVSEERVFELFQRWKDKHGKAYKHTEEAERRFRNFKNNLEYVVEKKNNPGGHVVG---LNKFADMSNEEFREIYLKKIQKPIGKAIGNAKSNLHKTVQSCEAPSS----LDWRKRGIVTPVKDQGSCGSCWSFSTTGAIEGINALVTGDLISLSEQELVDCDTTSCGCDGGYMDYAFEWVINHGGIHPESDYPYPGVDGTCNTPRRKPKFVSLM 700
            I+ L L SA S   E    G  +N     +R  + F+ + + + K Y    E  +R+  FK+NL  +  K  N          +NKF+D+S  E        I K  G +I    SN  KT+   + P       DWR++  VT +K+QG+CG+CW+F+T  ++E   A+    LI LSEQ+L+DCD+   GC+GG +  AFE ++  GG+  E DYP+ G +  C   R +P  VSL+
Sbjct:   29 IVTLALCSAASAADE----GAAYNL----QRAPDYFESFVENYNKNYTSDWEKNKRYSIFKDNLHEINAKNGNATDGPTATYKINKFSDLSKSEL-------IAKFTGLSIPERVSNFCKTIILNQPPDKGPLHFDWREQNKVTSIKNQGACGACWAFATLASVESQFAMRHNRLIDLSEQQLIDCDSVDMGCNGGLLHTAFEEIMRMGGVQTELDYPFVGRNRRCGLDRHRPYVVSLV 252          
BLAST of DY259864 vs. ExPASy Swiss-Prot
Match: CATL2_BOVIN (Cathepsin L2 OS=Bos taurus GN=CTSL2 PE=2 SV=1)

HSP 1 Score: 134.035 bits (336), Expect = 1.180e-30
Identity = 81/195 (41.54%), Postives = 106/195 (54.36%), Query Frame = 2
Query:  110 FQRWKDKHGKAYKHTEEAERRFRNFKN-------NLEYVVEKKNNPGGHVVGLNKFADMSNEEFREIYLKKIQKPIGKAIGNAKSNLHKTVQSCEAPSSLDWRKRGIVTPVKDQGSCGSCWSFSTTGAIEGINALVTGDLISLSEQELVDCDTT--SCGCDGGYMDYAFEWVINHGGIHPESDYPYPGVD-GTCN 664
            + +WK  H + Y   EE  RR    KN       N EY   K     G  + +N F DM+NEEFR++ +   Q    K     K  L       + P S+DW K+G VTPVK+QG CGSCW+FS TGA+EG     TG L+SLSEQ LVDC     + GC+GG MD AF+++ ++G +  E  YPY   D  +CN
Sbjct:   29 WHQWKATHRRLYGMNEEEWRRAVWEKNKKIIDLHNQEYSEGKH----GFRMAMNAFGDMTNEEFRQV-MNGFQNQKHK-----KGKLFHEPLLVDVPKSVDWTKKGYVTPVKNQGQCGSCWAFSATGALEGQMFRKTGKLVSLSEQNLVDCSRAQGNQGCNGGLMDNAFQYIKDNGCLDSEESYPYLATDTNSCN 213          
BLAST of DY259864 vs. ExPASy Swiss-Prot
Match: CATH_BOVIN (Cathepsin H OS=Bos taurus GN=CTSH PE=2 SV=1)

HSP 1 Score: 134.035 bits (336), Expect = 1.180e-30
Identity = 82/189 (43.39%), Postives = 108/189 (57.14%), Query Frame = 2
Query:  110 FQRWKDKHGKAYKHTEEAERRFRNFKNNLEYVVEKKNNPGGHV--VGLNKFADMSNEEFREIYLKKIQKPIGKAIGNAKSNLHKTVQSCEAPSSLDWRKRG-IVTPVKDQGSCGSCWSFSTTGAIEGINALVTGDLISLSEQELVDC--DTTSCGCDGGYMDYAFEWVINHGGIHPESDYPYPGVDGTC 661
            FQ W  +H K Y  +EE   R + F +NL  +    +N   H   +GLN+F+DMS +E +  YL    +         KSN  +       P S+DWRK+G  VTPVK+QGSCGSCW+FSTTGA+E   A+ TG L  L+EQ+LVDC  +  + GC GG    AFE++  + GI  E  YPY G DG C
Sbjct:   35 FQSWMVQHQKKYS-SEEYYHRLQAFASNLREI--NAHNARNHTFKMGLNQFSDMSFDELKRKYLWSEPQNCSAT----KSNYLRGTGPY--PPSMDWRKKGNFVTPVKNQGSCGSCWTFSTTGALESAVAIATGKLPFLAEQQLVDCAQNFNNHGCQGGLPSQAFEYIRYNKGIMGEDTYPYRGQDGDC 214          
BLAST of DY259864 vs. ExPASy Swiss-Prot
Match: CATV_NPVCD (Viral cathepsin OS=Choristoneura fumiferana defective polyhedrosis virus GN=Vcath PE=3 SV=1)

HSP 1 Score: 133.65 bits (335), Expect = 1.541e-30
Identity = 71/188 (37.77%), Postives = 103/188 (54.79%), Query Frame = 2
Query:  110 FQRWKDKHGKAYKHTEEAERRFRNFKNNLEYVVEKKNNPGGHVVGLNKFADMSNEEFREIYLKKIQKPIGKAIGNAKSNLHKTV----QSCEAPSSLDWRKRGIVTPVKDQGSCGSCWSFSTTGAIEGINALVTGDLISLSEQELVDCDTTSCGCDGGYMDYAFEWVINHGGIHPESDYPYPGVDGTC 661
            F+ +     K Y    E   RF+ F++NLE ++ K  N       +NKF+D+S +E        I K  G ++     N  + V       + P   DWR+   VT VK+QG+CG+CW+F+T G++E   A+    LI+LSEQ+L+DCD    GCDGG +  A+E V+N GGI  E+DYPY   +G C
Sbjct:   28 FEDFLHNFNKNYSSKSEKLHRFKIFQHNLEEIINKNLNDTSAQYEINKFSDLSKDE-------TISKYTGLSLPLQNQNFCEVVVLNRPPDKGPLEFDWRRLNKVTSVKNQGTCGACWAFATLGSLESQFAIKHDQLINLSEQQLIDCDFVDMGCDGGLLHTAYEAVMNMGGIQAENDYPYEANNGDC 208          
BLAST of DY259864 vs. ExPASy Swiss-Prot
Match: CATH_RAT (Cathepsin H OS=Rattus norvegicus GN=Ctsh PE=1 SV=1)

HSP 1 Score: 133.265 bits (334), Expect = 2.013e-30
Identity = 78/202 (38.61%), Postives = 112/202 (55.45%), Query Frame = 2
Query:  110 FQRWKDKHGKAYKHTEEAERRFRNFKNNLEYVVEKKNNPGGHVVGLNKFADMSNEEFREIYLKKIQKPIGKAIGNAKSNLHKTVQSCEAPSSLDWRKRG-IVTPVKDQGSCGSCWSFSTTGAIEGINALVTGDLISLSEQELVDC--DTTSCGCDGGYMDYAFEWVINHGGIHPESDYPYPGVDGTCN-TPRRKPKFVSLMV 703
            F  W  +H K Y  + E   R + F NN   +           +GLN+F+DMS  E +  YL    +         KSN  +       PSS+DWRK+G +V+PVK+QG+CGSCW+FSTTGA+E   A+ +G +++L+EQ+LVDC  +  + GC GG    AFE+++ + GI  E  YPY G +G C   P +   FV  +V
Sbjct:   33 FTSWMKQHQKTYS-SREYSHRLQVFANNWRKIQAHNQRNHTFKMGLNQFSDMSFAEIKHKYLWSEPQNCSAT----KSNYLRGTGPY--PSSMDWRKKGNVVSPVKNQGACGSCWTFSTTGALESAVAIASGKMMTLAEQQLVDCAQNFNNHGCQGGLPSQAFEYILYNKGIMGEDSYPYIGKNGQCKFNPEKAVAFVKNVV 227          
BLAST of DY259864 vs. ExPASy Swiss-Prot
Match: CATS_BOVIN (Cathepsin S OS=Bos taurus GN=CTSS PE=1 SV=2)

HSP 1 Score: 132.88 bits (333), Expect = 2.629e-30
Identity = 73/188 (38.83%), Postives = 109/188 (57.98%), Query Frame = 2
Query:  119 WKDKHGKAYKH-TEEAERRF---RNFKNNLEYVVEKKNNPGGHVVGLNKFADMSNEEFREIYLKKIQKPIGKAIGNAKSNLHKTVQSCEAPSSLDWRKRGIVTPVKDQGSCGSCWSFSTTGAIEGINALVTGDLISLSEQELVDCDTT---SCGCDGGYMDYAFEWVINHGGIHPESDYPYPGVDGTC 661
            WK  +GK YK   EE  RR    +N K    + +E       + +G+N   DM++EE   + +  ++ P        ++  +K+  + + P S+DWR++G VT VK QG+CGSCW+FS  GA+E    L TG L+SLS Q LVDC T    + GC+GG+M  AF+++I++ GI  E+ YPY  +DG C
Sbjct:   31 WKKTYGKQYKEKNEEVARRLIWEKNLKTVTLHNLEHSMGMHSYELGMNHLGDMTSEEVISL-MSSLRVPSQWP----RNVTYKSDPNQKLPDSMDWREKGCVTEVKYQGACGSCWAFSAVGALEAQVKLKTGKLVSLSAQNLVDCSTAKYGNKGCNGGFMTEAFQYIIDNNGIDSEASYPYKAMDGKC 213          
BLAST of DY259864 vs. ExPASy Swiss-Prot
Match: CATV_NPVST (Viral cathepsin OS=Spodoptera litura multicapsid nucleopolyhedrovirus GN=VCATH PE=3 SV=1)

HSP 1 Score: 132.494 bits (332), Expect = 3.434e-30
Identity = 81/225 (36.00%), Postives = 112/225 (49.78%), Query Frame = 2
Query:    2 VILFLILASATSLPSEHSIIGHDFNEFVSEERVFELFQRWKDKHGKAYKHTEEAERRFRNFKNNLEYVVEKKNNPGGHVVGLNKFADMSNEEFREIYLKKIQKPIGKAIGNAKSNL---HKTVQ--SCEAPSSLDWRKRGIVTPVKDQGSCGSCWSFSTTGAIEGINALVTGDLISLSEQELVDCDTTSCGCDGGYMDYAFEWVINHGGIHPESDYPYPGVDGTC 661
            +  + I+A AT+  +   I    F +  S    +E F +   +H K Y   ++ +  F NFK NL  +    N     V G+NKF+D+    F   +   +   I     N        + TV   S   P S DWRK   VT VK+QG CGSCW+F+  G IE   A++   LI LSEQ+L+DCD    GCDGG M  AF+ +I  GG+  E DYPY G++  C
Sbjct:    4 IYYYTIIAVATASIANEKI----FYDIDSASVYYENFIK---QHNKEYTTPDQRDAAFVNFKRNLADMNAMNNVSNQAVYGINKFSDIDKITFVNEHAGLVSNLINSTDSNFDPYRLCEYVTVAGPSARTPESFDWRKLNKVTKVKEQGVCGSCWAFAAIGNIESQYAIMHDSLIDLSEQQLLDCDRVDQGCDGGLMHLAFQEIIRIGGVEHEIDYPYQGIEYAC 221          
BLAST of DY259864 vs. ExPASy Swiss-Prot
Match: ERVC_TABDI (Ervatamin-C OS=Tabernaemontana divaricata PE=1 SV=1)

HSP 1 Score: 131.339 bits (329), Expect = 7.649e-30
Identity = 56/95 (58.95%), Postives = 73/95 (76.84%), Query Frame = 2
Query:  377 PSSLDWRKRGIVTPVKDQGSCGSCWSFSTTGAIEGINALVTGDLISLSEQELVDCDTTSCGCDGGYMDYAFEWVINHGGIHPESDYPYPGVDGTC 661
            P  +DWRK+G VTPVK+QGSCGSCW+FST   +E IN + TG+LISLSEQELVDCD  + GC GG   +A++++IN+GGI  +++YPY  V G C
Sbjct:    2 PEQIDWRKKGAVTPVKNQGSCGSCWAFSTVSTVESINQIRTGNLISLSEQELVDCDKKNHGCLGGAFVFAYQYIINNGGIDTQANYPYKAVQGPC 96          
The following BLAST results are available for this feature:
BLAST of DY259864 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 159
Match NameE-valueIdentityDescription
CATF_HUMAN9.036e-3140.40Cathepsin F OS=Homo sapiens GN=CTSF PE=1 SV=1[more]
CATV_NPVOP1.180e-3037.77Viral cathepsin OS=Orgyia pseudotsugata multicapsi... [more]
CATV_NPVLD1.180e-3034.31Viral cathepsin OS=Lymantria dispar multicapsid nu... [more]
CATL2_BOVIN1.180e-3041.54Cathepsin L2 OS=Bos taurus GN=CTSL2 PE=2 SV=1[more]
CATH_BOVIN1.180e-3043.39Cathepsin H OS=Bos taurus GN=CTSH PE=2 SV=1[more]
CATV_NPVCD1.541e-3037.77Viral cathepsin OS=Choristoneura fumiferana defect... [more]
CATH_RAT2.013e-3038.61Cathepsin H OS=Rattus norvegicus GN=Ctsh PE=1 SV=1[more]
CATS_BOVIN2.629e-3038.83Cathepsin S OS=Bos taurus GN=CTSS PE=1 SV=2[more]
CATV_NPVST3.434e-3036.00Viral cathepsin OS=Spodoptera litura multicapsid n... [more]
ERVC_TABDI7.649e-3058.95Ervatamin-C OS=Tabernaemontana divaricata PE=1 SV=... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAP10YH03FM1 Fruit-TF Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY259864 ID=DY259864; Name=DY259864; organism=Citrus clementina; type=EST; length=941bp
GGTTATTCTTTTCTTGATTTTGGCTTCGGCTACTAGCCTCCCTAGTGAAC
ACTCCATCATTGGTCATGACTTTAATGAGTTTGTTTCAGAGGAGCGGGTA
TTCGAGTTATTTCAACGATGGAAAGATAAGCATGGCAAGGCGTACAAGCA
TACAGAAGAGGCAGAAAGGAGGTTCAGAAATTTTAAGAATAACTTGGAGT
ATGTTGTTGAAAAGAAAAATAATCCTGGTGGGCATGTTGTTGGGTTGAAC
AAGTTTGCTGACATGAGCAATGAGGAGTTTCGAGAAATTTATTTGAAAAA
GATTCAAAAGCCTATTGGCAAAGCGATTGGTAATGCAAAGAGTAACTTGC
ACAAGACGGTACAATCATGCGAAGCACCATCGAGCTTGGATTGGAGGAAA
AGGGGAATCGTTACTCCTGTTAAGGACCAAGGAAGCTGTGGAAGTTGTTG
GTCGTTCTCTACGACTGGAGCCATTGAAGGAATAAATGCCTTGGTCACTG
GAGACCTCATTAGCCTTTCGGAACAAGAACTCGTGGATTGTGATACCACA
AGCTGTGGATGTGATGGAGGCTACATGGATTATGCATTTGAATGGGTTAT
TAACCACGGTGGAATCCACCCAGAATCTGATTATCCTTACCCCGGTGTCG
ATGGTACCTGCAATACCCCAAGGAGGAAACCCAAATTTGTATCATTGATG
GTTATAAAGACGTAGAGCCCCCCATAGTGCTCTGCCATGCGCCGCCGTTC
CCTCCCGATTCGCCCTTGCTTGGTTGGCTCCGCCATCGTTTTTCCCCCTT
TATCCCATGGGACCTTCACCCGGGGCCGGTCCCCCCCCCCCCTTTACCTC
GCCCAGCCGGTTTTCTCTCTCCGCCCTGTCCTTCAAAACGGGAGCAAATC
TTTGCATCTGCACACAATCCATGGGGACACACCTCCGGGGA
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