DY259864

Overview
NameDY259864
Unique NameDY259864
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length941
Libraries
Library NameType
Fruit-TFcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY259864 vs. ExPASy Swiss-Prot
Match: CATV_GVXN (Viral cathepsin OS=Xestia c-nigrum granulosis virus GN=VCATH PE=3 SV=1)

HSP 1 Score: 131.339 bits (329), Expect = 7.649e-30
Identity = 79/197 (40.10%), Postives = 102/197 (51.78%), Query Frame = 2
Query:  104 ELFQRWKDKHGKAYKHTEEAERRFRNFKNNLEYVVEKKNNPGGHVVGLNKFADMSNEEFREIYLKKIQKPIGKAIGNAKSNLHKTV------QSCEAPSSLDWRKRGIVTPVKDQGSCGSCWSFSTTGAIEGINALVTGDLISLSEQELVDCDTTSCGCDGGYMDYAFEWVINHGGIHPESDYPYPGVDGTC-NTPR 673
            ELF  +  K+ K YK  +E E RF  FK NL  +  +       +  +N  AD+S+ E     L+K+       +   K N   T        S + P S DWR R  VT VK Q  CGSCW+FS    IE +  +     + LSEQ+LVDCD  + GC+GG M +AFE +I  GGI  E+ YPY GVDG C NT R
Sbjct:   41 ELFNEFVVKYNKVYKDDQEKEARFEIFKQNLADINARNALEDSAMFEINSRADISSNEL----LQKLTGLKLSLMRGEKKNSFCTPTVISGDSSGKVPDSFDWRDRNSVTSVKMQKECGSCWAFSAVANIESLYHIKHNVSLDLSEQQLVDCDKVNNGCNGGLMSWAFEGIIRAGGISYEAPYPYTGVDGVCKNTTR 233          
BLAST of DY259864 vs. ExPASy Swiss-Prot
Match: CATV_NPVMC (Viral cathepsin OS=Mamestra configurata nucleopolyhedrovirus GN=VCATH PE=3 SV=1)

HSP 1 Score: 130.954 bits (328), Expect = 9.990e-30
Identity = 74/225 (32.89%), Postives = 117/225 (52.00%), Query Frame = 2
Query:    5 ILFLILASATSLPSEHSIIGHDFNEFVSEERVFEL-FQRWKDKHGKAYKHTEEAERRFRNFKNNLEYVVEKKNNPGGHVVGLNKFADMSNEEFREIYLKKIQKPIGKAIGNAKSNLHKTVQ-----SCEAPSSLDWRKRGIVTPVKDQGSCGSCWSFSTTGAIEGINALVTGDLISLSEQELVDCDTTSCGCDGGYMDYAFEWVINHGGIHPESDYPYPGVDGTC 661
            IL L+L  +  L S   ++       +       L F+++  ++ K Y   +E + R+  F++N+E +  K +     V  +N+FADM+  E        + +  G A G+  +N  +T+        + P++ DWR    VT VKDQG CG+CW+F+  GA+E   A+    LI L+EQ+LVDCD    GCDGG +  A+E +++ GG+  E DYPY  V   C
Sbjct:    4 ILILLLLVSAVLTSHDQVVAVTIKPNLYNINSAPLYFEKFISQYNKQYSSEDEKKYRYNIFRHNIESINAKNSRNDSAVYKINRFADMTKNEV-------VNRHTGLASGDIGANFCETIVVDGPGQRQRPANFDWRNYNKVTSVKDQGMCGACWAFAGLGALESQYAIKYDRLIDLAEQQLVDCDFVDMGCDGGLIHTAYEQIMHIGGVEQEYDYPYKAVRLPC 221          
BLAST of DY259864 vs. ExPASy Swiss-Prot
Match: CATV_NPVBM (Viral cathepsin OS=Bombyx mori nuclear polyhedrosis virus GN=VCATH PE=1 SV=1)

HSP 1 Score: 130.568 bits (327), Expect = 1.305e-29
Identity = 69/194 (35.57%), Postives = 103/194 (53.09%), Query Frame = 2
Query:  110 FQRWKDKHGKAYKHTEEAERRFRNFKNNLEYVVEKKNNPGGHVVGLNKFADMSNEEFREIYLKKIQKPIGKAIGNAKSNLHKTVQSCEAPSS----LDWRKRGIVTPVKDQGSCGSCWSFSTTGAIEGINALVTGDLISLSEQELVDCDTTSCGCDGGYMDYAFEWVINHGGIHPESDYPYPGVDGTCNTPRRK 679
            F+ +  +  K Y    E  RRF+ F++NL  ++ K  N       +NKF+D+S +E        I K  G ++     N  K +   + P       DWR+   VT VK+QG CG+CW+F+T G++E   A+   +LI+LSEQ+++DCD    GC+GG +  AFE +I  GG+  ESDYPY   +  C     K
Sbjct:   28 FEEFVHRFNKNYSSEVEKLRRFKIFQHNLNEIINKNQNDSAKYE-INKFSDLSKDE-------TIAKYTGLSLPTQTQNFCKVILLDQPPGKGPLEFDWRRLNKVTSVKNQGMCGACWAFATLGSLESQFAIKHNELINLSEQQMIDCDFVDAGCNGGLLHTAFEAIIKMGGVQLESDYPYEADNNNCRMNSNK 213          
BLAST of DY259864 vs. ExPASy Swiss-Prot
Match: ACP1_ENTHI (Cysteine proteinase ACP1 OS=Entamoeba histolytica GN=ACP1 PE=1 SV=2)

HSP 1 Score: 130.568 bits (327), Expect = 1.305e-29
Identity = 72/184 (39.13%), Postives = 102/184 (55.43%), Query Frame = 2
Query:  110 FQRWKDKHGKAYKHTEEAERRFRNFKNNLEYVVEKKNNPGGHVVGLNKFADMSNEEFREIYLKKIQKPIGKAIGNAKSNLHKTVQSCEAPSSLDWRKRGIVTPVKDQGSCGSCWSFSTTGAIEGINALVTGDLISLSEQELVDCDTTSCGCDGGYMDYAFEWVINHGGIHPESDYPYPGVDGTC 661
            F++W   H K + +  E   RF  F +N ++V    N        LN FADM++EEF + +L    +     +    SN+   V++  AP S+DWR   I+ P KDQG CGSCW+F TT  +EG      G L S SEQ+LVDCD +  GC+GG+   + +++  + G+  ESDYPY  V GTC
Sbjct:   18 FKQWAATHNKVFANRAEYLYRFAVFLDNKKFVEANANTE------LNVFADMTHEEFIQTHLGMTYE-----VPETTSNVKAAVKA--APESVDWRS--IMNPAKDQGQCGSCWTFCTTAVLEGRVNKDLGKLYSFSEQQLVDCDASDNGCEGGHPSNSLKFIQENNGLGLESDYPYKAVAGTC 186          
BLAST of DY259864 vs. ExPASy Swiss-Prot
Match: CATK_MACMU (Cathepsin K OS=Macaca mulatta GN=CTSK PE=1 SV=1)

HSP 1 Score: 130.183 bits (326), Expect = 1.704e-29
Identity = 75/199 (37.69%), Postives = 110/199 (55.28%), Query Frame = 2
Query:   89 EERVFELFQRWKDKHGKAYKHTEEAERRFRNFKNNLEYV----VEKKNNPGGHVVGLNKFADMSNEEFREIYLKKIQKPIGKAIGNAKSNLHKTVQSCE----APSSLDWRKRGIVTPVKDQGSCGSCWSFSTTGAIEGINALVTGDLISLSEQELVDCDTTSCGCDGGYMDYAFEWVINHGGIHPESDYPYPGVDGTC 661
            EE +   ++ WK  H K Y    +   R   ++ NL+Y+    +E       + + +N   DM+NEE        +QK  G  +  + S  + T+   +    AP S+D+RK+G VTPVK+QG CGSCW+FS+ GA+EG     TG L++LS Q LVDC + + GC GGYM  AF++V  + GI  E  YPY G + +C
Sbjct:   19 EEILDTHWELWKKTHRKQYNSKVDEISRRLIWEKNLKYISIHNLEASLGVHTYELAMNHLGDMTNEEV-------VQKMTGLKVPASHSRSNDTLYIPDWEGRAPDSVDYRKKGYVTPVKNQGQCGSCWAFSSVGALEGQLKKKTGKLLNLSPQNLVDCVSENDGCGGGYMTNAFQYVQKNRGIDSEDAYPYVGQEESC 210          
BLAST of DY259864 vs. ExPASy Swiss-Prot
Match: CATK_MACFA (Cathepsin K OS=Macaca fascicularis GN=CTSK PE=2 SV=1)

HSP 1 Score: 130.183 bits (326), Expect = 1.704e-29
Identity = 75/199 (37.69%), Postives = 110/199 (55.28%), Query Frame = 2
Query:   89 EERVFELFQRWKDKHGKAYKHTEEAERRFRNFKNNLEYV----VEKKNNPGGHVVGLNKFADMSNEEFREIYLKKIQKPIGKAIGNAKSNLHKTVQSCE----APSSLDWRKRGIVTPVKDQGSCGSCWSFSTTGAIEGINALVTGDLISLSEQELVDCDTTSCGCDGGYMDYAFEWVINHGGIHPESDYPYPGVDGTC 661
            EE +   ++ WK  H K Y    +   R   ++ NL+Y+    +E       + + +N   DM+NEE        +QK  G  +  + S  + T+   +    AP S+D+RK+G VTPVK+QG CGSCW+FS+ GA+EG     TG L++LS Q LVDC + + GC GGYM  AF++V  + GI  E  YPY G + +C
Sbjct:   19 EEILDTHWELWKKTHRKQYNSKVDEISRRLIWEKNLKYISIHNLEASLGVHTYELAMNHLGDMTNEEV-------VQKMTGLKVPASHSRSNDTLYIPDWEGRAPDSVDYRKKGYVTPVKNQGQCGSCWAFSSVGALEGQLKKKTGKLLNLSPQNLVDCVSENDGCGGGYMTNAFQYVQKNRGIDSEDAYPYVGQEESC 210          
BLAST of DY259864 vs. ExPASy Swiss-Prot
Match: CATK_HUMAN (Cathepsin K OS=Homo sapiens GN=CTSK PE=1 SV=1)

HSP 1 Score: 129.798 bits (325), Expect = 2.226e-29
Identity = 75/199 (37.69%), Postives = 111/199 (55.78%), Query Frame = 2
Query:   89 EERVFELFQRWKDKHGKAYKHTEEAERRFRNFKNNLEYV----VEKKNNPGGHVVGLNKFADMSNEEFREIYLKKIQKPIGKAIGNAKSNLHKTVQSCE----APSSLDWRKRGIVTPVKDQGSCGSCWSFSTTGAIEGINALVTGDLISLSEQELVDCDTTSCGCDGGYMDYAFEWVINHGGIHPESDYPYPGVDGTC 661
            EE +   ++ WK  H K Y +  +   R   ++ NL+Y+    +E       + + +N   DM++EE        +QK  G  +  + S  + T+   E    AP S+D+RK+G VTPVK+QG CGSCW+FS+ GA+EG     TG L++LS Q LVDC + + GC GGYM  AF++V  + GI  E  YPY G + +C
Sbjct:   19 EEILDTHWELWKKTHRKQYNNKVDEISRRLIWEKNLKYISIHNLEASLGVHTYELAMNHLGDMTSEEV-------VQKMTGLKVPLSHSRSNDTLYIPEWEGRAPDSVDYRKKGYVTPVKNQGQCGSCWAFSSVGALEGQLKKKTGKLLNLSPQNLVDCVSENDGCGGGYMTNAFQYVQKNRGIDSEDAYPYVGQEESC 210          
BLAST of DY259864 vs. ExPASy Swiss-Prot
Match: CATV_NPVSE (Viral cathepsin OS=Spodoptera exigua nuclear polyhedrosis virus (strain US) GN=VCATH PE=3 SV=1)

HSP 1 Score: 129.413 bits (324), Expect = 2.907e-29
Identity = 74/226 (32.74%), Postives = 118/226 (52.21%), Query Frame = 2
Query:    2 VILFLILASATSLPSEHSIIGHDFNEF-VSEERVFELFQRWKDKHGKAYKHTEEAERRFRNFKNNLEYVVEKKNNPGGHVVGLNKFADMSNEEFREIYLKKIQKPIGKAIGNAKSNLHKTV-----QSCEAPSSLDWRKRGIVTPVKDQGSCGSCWSFSTTGAIEGINALVTGDLISLSEQELVDCDTTSCGCDGGYMDYAFEWVINHGGIHPESDYPYPGVDGTC 661
            +ILFL+L +A +    H+   +    + ++   ++  F+++  ++ K YK  +E + R+  F++N+E + +K +     V  +N+FADM   E        + +  G A G    N  +T+        + P S DWR    +T VKDQG CG+CW F++ GA+E   A+    LI LSEQ+LVDCD    GCDGG +  A+E ++  GG+  E DY Y      C
Sbjct:    5 LILFLLLNAALTRQDNHASANNKPMLYNINSAPLY--FEKFITQYNKQYKSEDEKKYRYNIFRHNIESINQKNSRNDSAVYKINRFADMPKNEI-------VIRHTGLASGELGLNFCETIVVDGPAQRQRPVSFDWRSMNKITSVKDQGMCGACWRFASLGALESQYAIKYDRLIDLSEQQLVDCDFVDMGCDGGLIHTAYEQIMKMGGVEQEFDYSYKAERQPC 221          
BLAST of DY259864 vs. ExPASy Swiss-Prot
Match: CATL6_HUMAN (Putative cathepsin L-like protein 6 OS=Homo sapiens GN=CTSLL6 PE=5 SV=3)

HSP 1 Score: 129.028 bits (323), Expect = 3.796e-29
Identity = 74/171 (43.27%), Postives = 101/171 (59.06%), Query Frame = 2
Query:  185 KNNLEYVVEKKNNPGGHVVGLNKFADMSNEEFREIYLK-KIQKPIGKAIGNAKSNLHKTVQSCEAPSSLDWRKRGIVTPVKDQGSCGSCWSFSTTGAIEGINALVTGDLISLSEQELVDCD--TTSCGCDGGYMDYAFEWVINHGGIHPESDYPYPGVDGTCNTPRRKPKF 688
            ++N EY   K +      + +N F DM+NEEFR++    + QK       + K    +     E P+S+DWR++G +TPVKDQG CGSCW+FS TGA+EG     TG LISL+EQ LVDC     + GC+GG+MD  F +V  +GG+  E+ YPY G   TC   R  PK+
Sbjct:    4 QHNQEYSQGKHS----FTMAMNAFGDMTNEEFRQVMNGFQYQK-------HRKGKQFQERLLPEIPTSVDWREKGYMTPVKDQGQCGSCWAFSATGALEGQMFWKTGKLISLNEQNLVDCSGPQGNEGCNGGFMDNPFRYVQENGGLDSEASYPYEGKVKTC---RYNPKY 160          
BLAST of DY259864 vs. ExPASy Swiss-Prot
Match: CATH_MOUSE (Cathepsin H OS=Mus musculus GN=Ctsh PE=2 SV=1)

HSP 1 Score: 129.028 bits (323), Expect = 3.796e-29
Identity = 76/202 (37.62%), Postives = 110/202 (54.46%), Query Frame = 2
Query:  110 FQRWKDKHGKAYKHTEEAERRFRNFKNNLEYVVEKKNNPGGHVVGLNKFADMSNEEFREIYLKKIQKPIGKAIGNAKSNLHKTVQSCEAPSSLDWRKRG-IVTPVKDQGSCGSCWSFSTTGAIEGINALVTGDLISLSEQELVDCDT--TSCGCDGGYMDYAFEWVINHGGIHPESDYPYPGVDGTCN-TPRRKPKFVSLMV 703
            F+ W  +H K Y   E    R + F NN   +           + LN+F+DMS  E +  +L    +         KSN  +       PSS+DWRK+G +V+PVK+QG+C SCW+FSTTGA+E   A+ +G ++SL+EQ+LVDC     + GC GG    AFE+++ + GI  E  YPY G D +C   P++   FV  +V
Sbjct:   33 FKSWMKQHQKTYSSVEY-NHRLQMFANNWRKIQAHNQRNHTFKMALNQFSDMSFAEIKHKFLWSEPQNCSAT----KSNYLRGTGPY--PSSMDWRKKGNVVSPVKNQGACASCWTFSTTGALESAVAIASGKMLSLAEQQLVDCAQAFNNHGCKGGLPSQAFEYILYNKGIMEEDSYPYIGKDSSCRFNPQKAVAFVKNVV 227          
The following BLAST results are available for this feature:
BLAST of DY259864 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 159
Match NameE-valueIdentityDescription
CATV_GVXN7.649e-3040.10Viral cathepsin OS=Xestia c-nigrum granulosis viru... [more]
CATV_NPVMC9.990e-3032.89Viral cathepsin OS=Mamestra configurata nucleopoly... [more]
CATV_NPVBM1.305e-2935.57Viral cathepsin OS=Bombyx mori nuclear polyhedrosi... [more]
ACP1_ENTHI1.305e-2939.13Cysteine proteinase ACP1 OS=Entamoeba histolytica ... [more]
CATK_MACMU1.704e-2937.69Cathepsin K OS=Macaca mulatta GN=CTSK PE=1 SV=1[more]
CATK_MACFA1.704e-2937.69Cathepsin K OS=Macaca fascicularis GN=CTSK PE=2 SV... [more]
CATK_HUMAN2.226e-2937.69Cathepsin K OS=Homo sapiens GN=CTSK PE=1 SV=1[more]
CATV_NPVSE2.907e-2932.74Viral cathepsin OS=Spodoptera exigua nuclear polyh... [more]
CATL6_HUMAN3.796e-2943.27Putative cathepsin L-like protein 6 OS=Homo sapien... [more]
CATH_MOUSE3.796e-2937.62Cathepsin H OS=Mus musculus GN=Ctsh PE=2 SV=1[more]

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Properties
Property NameValue
Genbank descriptionKN0AAP10YH03FM1 Fruit-TF Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY259864 ID=DY259864; Name=DY259864; organism=Citrus clementina; type=EST; length=941bp
GGTTATTCTTTTCTTGATTTTGGCTTCGGCTACTAGCCTCCCTAGTGAAC
ACTCCATCATTGGTCATGACTTTAATGAGTTTGTTTCAGAGGAGCGGGTA
TTCGAGTTATTTCAACGATGGAAAGATAAGCATGGCAAGGCGTACAAGCA
TACAGAAGAGGCAGAAAGGAGGTTCAGAAATTTTAAGAATAACTTGGAGT
ATGTTGTTGAAAAGAAAAATAATCCTGGTGGGCATGTTGTTGGGTTGAAC
AAGTTTGCTGACATGAGCAATGAGGAGTTTCGAGAAATTTATTTGAAAAA
GATTCAAAAGCCTATTGGCAAAGCGATTGGTAATGCAAAGAGTAACTTGC
ACAAGACGGTACAATCATGCGAAGCACCATCGAGCTTGGATTGGAGGAAA
AGGGGAATCGTTACTCCTGTTAAGGACCAAGGAAGCTGTGGAAGTTGTTG
GTCGTTCTCTACGACTGGAGCCATTGAAGGAATAAATGCCTTGGTCACTG
GAGACCTCATTAGCCTTTCGGAACAAGAACTCGTGGATTGTGATACCACA
AGCTGTGGATGTGATGGAGGCTACATGGATTATGCATTTGAATGGGTTAT
TAACCACGGTGGAATCCACCCAGAATCTGATTATCCTTACCCCGGTGTCG
ATGGTACCTGCAATACCCCAAGGAGGAAACCCAAATTTGTATCATTGATG
GTTATAAAGACGTAGAGCCCCCCATAGTGCTCTGCCATGCGCCGCCGTTC
CCTCCCGATTCGCCCTTGCTTGGTTGGCTCCGCCATCGTTTTTCCCCCTT
TATCCCATGGGACCTTCACCCGGGGCCGGTCCCCCCCCCCCCTTTACCTC
GCCCAGCCGGTTTTCTCTCTCCGCCCTGTCCTTCAAAACGGGAGCAAATC
TTTGCATCTGCACACAATCCATGGGGACACACCTCCGGGGA
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