DY259866
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DY259866 vs. ExPASy Swiss-Prot
Match: ARFU_ARATH (Putative auxin response factor 21 OS=Arabidopsis thaliana GN=ARF21 PE=2 SV=2) HSP 1 Score: 97.0561 bits (240), Expect = 1.540e-19 Identity = 50/110 (45.45%), Postives = 69/110 (62.73%), Query Frame = 1 Query: 7 LRSPQESQSRQI---RSCTKVHMQGIAVGRAVDLTRFDCYEDLLKKLEEMFDIEGDLCGSTKKWQVVYTXXXXXXXXXXXXPWHEFCSMVRKIFIYTAEEVKKLSPKVKL 327 LRSP E QS+Q R+CTKV MQG+ +GRAVDL+ + Y+ L+ +LE++FDI+G L + +W++ +T PW EFC MV+KI IY+ EEVK L L Sbjct: 496 LRSPIEIQSKQFSSSRTCTKVQMQGVTIGRAVDLSVLNGYDQLILELEKLFDIKGQL-QTRNQWKIAFTDSDGYEMLVGDDPWPEFCKMVKKILIYSKEEVKNLKSSKSL 604
BLAST of DY259866 vs. ExPASy Swiss-Prot
Match: ARFK_ARATH (Auxin response factor 11 OS=Arabidopsis thaliana GN=ARF11 PE=2 SV=3) HSP 1 Score: 97.0561 bits (240), Expect = 1.540e-19 Identity = 50/103 (48.54%), Postives = 66/103 (64.08%), Query Frame = 1 Query: 13 SPQES-QSRQIRSCTKVHMQGIAVGRAVDLTRFDCYEDLLKKLEEMFDIEGDLCGSTKKWQVVYTXXXXXXXXXXXXPWHEFCSMVRKIFIYTAEEVKKLSPK 318 SP+E Q RS KV MQG AVGRAVDLT Y++L+K+LE+MF+IEG+L KW +V+T PW+EFC M +K+FIY ++EVKK+ K Sbjct: 500 SPKEQKQQTSTRSRIKVQMQGTAVGRAVDLTLLRSYDELIKELEKMFEIEGEL-SPKDKWAIVFTDDEGDRMLVGDDPWNEFCKMAKKLFIYPSDEVKKMRSK 601
BLAST of DY259866 vs. ExPASy Swiss-Prot
Match: ARFI_ARATH (Auxin response factor 9 OS=Arabidopsis thaliana GN=ARF9 PE=2 SV=1) HSP 1 Score: 97.0561 bits (240), Expect = 1.540e-19 Identity = 49/104 (47.12%), Postives = 70/104 (67.31%), Query Frame = 1 Query: 13 SPQESQSRQ---IRSCTKVHMQGIAVGRAVDLTRFDCYEDLLKKLEEMFDIEGDLCGSTKKWQVVYTXXXXXXXXXXXXPWHEFCSMVRKIFIYTAEEVKKLSP 315 SP+E QS+Q RS TKV MQG+ VGRAVDL Y +L+ +E++FDI+G+L S +W++V+T PW EFC+MV++IFI++ EEVKK++P Sbjct: 510 SPKEVQSKQSSSTRSRTKVQMQGVPVGRAVDLNALKGYNELIDDIEKLFDIKGEL-RSRNQWEIVFTDDEGDMMLVGDDPWPEFCNMVKRIFIWSKEEVKKMTP 612
BLAST of DY259866 vs. ExPASy Swiss-Prot
Match: ARFT_ARATH (Auxin response factor 20 OS=Arabidopsis thaliana GN=ARF20 PE=2 SV=3) HSP 1 Score: 96.2857 bits (238), Expect = 2.627e-19 Identity = 49/110 (44.55%), Postives = 69/110 (62.73%), Query Frame = 1 Query: 7 LRSPQESQSRQI---RSCTKVHMQGIAVGRAVDLTRFDCYEDLLKKLEEMFDIEGDLCGSTKKWQVVYTXXXXXXXXXXXXPWHEFCSMVRKIFIYTAEEVKKLSPKVKL 327 LRSP E QS+Q R+CTKV MQG+ +GRAVDL+ + Y+ L+ +LE++FD++G L + +W++ +T PW EFC MV+KI IY+ EEVK L L Sbjct: 480 LRSPIEIQSKQFGSTRTCTKVQMQGVTIGRAVDLSVLNGYDQLILELEKLFDLKGQL-QTRNQWKIAFTDSDGYEMLVGDDPWPEFCKMVKKILIYSKEEVKNLKSSKSL 588
BLAST of DY259866 vs. ExPASy Swiss-Prot
Match: ARFM_ARATH (Auxin response factor 13 OS=Arabidopsis thaliana GN=ARF13 PE=2 SV=3) HSP 1 Score: 95.5153 bits (236), Expect = 4.480e-19 Identity = 49/109 (44.95%), Postives = 70/109 (64.22%), Query Frame = 1 Query: 7 LRSPQESQSRQI---RSCTKVHMQGIAVGRAVDLTRFDCYEDLLKKLEEMFDIEGDLCGSTKKWQVVYTXXXXXXXXXXXXPWHEFCSMVRKIFIYTAEEVKKLSPKVK 324 LRSP+E QS + RS KVHMQG+A+ RAVDLT Y L++KLEE+FD++ +L + +W++V+T PW EFC+M ++IFI + EE+KK+ K K Sbjct: 493 LRSPKEVQSTEFNFTRSRIKVHMQGVAISRAVDLTAMHGYNQLIQKLEELFDLKDEL-RTRNQWEIVFTNNEGAEMLVGDDPWPEFCNMAKRIFICSKEEIKKMKLKNK 600
BLAST of DY259866 vs. ExPASy Swiss-Prot
Match: ARFD_ARATH (Auxin response factor 4 OS=Arabidopsis thaliana GN=ARF4 PE=2 SV=1) HSP 1 Score: 93.2041 bits (230), Expect = 2.224e-18 Identity = 44/92 (47.83%), Postives = 60/92 (65.22%), Query Frame = 1 Query: 28 QSRQIRSCTKVHMQGIAVGRAVDLTRFDCYEDLLKKLEEMFDIEGDLCGSTKKWQVVYTXXXXXXXXXXXXPWHEFCSMVRKIFIYTAEEVK 303 QS R CTKVH QG VGRA+DL+R + Y+DLL +LE +F++EG L K W+++YT PWH+FC++V KI +YT EEV+ Sbjct: 660 QSSSKRICTKVHKQGSQVGRAIDLSRLNGYDDLLMELERLFNMEGLLRDPEKGWRILYTDSENDMMVVGDDPWHDFCNVVWKIHLYTKEEVE 751
BLAST of DY259866 vs. ExPASy Swiss-Prot
Match: ARFA_ORYSJ (Auxin response factor 1 OS=Oryza sativa subsp. japonica GN=ARF1 PE=2 SV=1) HSP 1 Score: 90.1225 bits (222), Expect = 1.882e-17 Identity = 53/108 (49.07%), Postives = 64/108 (59.26%), Query Frame = 1 Query: 13 SPQESQSRQ---IRSCTKVHMQGIAVGRAVDLTRFDCYEDLLKKLEEMFDIEGDLCGSTKKWQVVYTXXXXXXXXXXXXPWHEFCSMVRKIFIYTAEEVKKLSPKVKL 327 SPQE QS Q R+ KV M G AVGRAVDL D YE L+ +LEEMF+I+ DL +KW+V +T PW EFC MVRKI +Y E+ KK+ P KL Sbjct: 582 SPQEIQSHQNYTARTRIKVQMHGNAVGRAVDLANLDGYEQLMNELEEMFNIK-DL---KQKWKVAFTDDEGDTMEVGDDPWLEFCQMVRKIVLYPIEDEKKIEPHPKL 685
BLAST of DY259866 vs. ExPASy Swiss-Prot
Match: ARFL_ARATH (Auxin response factor 12 OS=Arabidopsis thaliana GN=ARF12 PE=2 SV=2) HSP 1 Score: 87.8113 bits (216), Expect = 9.342e-17 Identity = 43/95 (45.26%), Postives = 63/95 (66.32%), Query Frame = 1 Query: 7 LRSPQESQSRQI---RSCTKVHMQGIAVGRAVDLTRFDCYEDLLKKLEEMFDIEGDLCGSTKKWQVVYTXXXXXXXXXXXXPWHEFCSMVRKIFI 282 LRSP E Q++Q R+CTKV MQG+ +GRAVDL+ + Y+ L+ +LE++FDI+G L + +W++ +T PW EFC+MV+KIFI Sbjct: 496 LRSPTEIQNKQFSSSRTCTKVQMQGVTIGRAVDLSVLNGYDQLILELEKLFDIKGQL-QTRNQWEIAFTDSDEDKMLVGDDPWPEFCNMVKKIFI 589
BLAST of DY259866 vs. ExPASy Swiss-Prot
Match: ARFV_ARATH (Auxin response factor 22 OS=Arabidopsis thaliana GN=ARF22 PE=2 SV=2) HSP 1 Score: 85.5001 bits (210), Expect = 4.637e-16 Identity = 42/96 (43.75%), Postives = 62/96 (64.58%), Query Frame = 1 Query: 7 LRSPQESQSRQI---RSCTKVHMQGIAVGRAVDLTRFDCYEDLLKKLEEMFDIEGDLCGSTKKWQVVYTXXXXXXXXXXXXPWHEFCSMVRKIFIY 285 LRSP E QS+Q R+CTKV MQG+ + RAVDL+ + Y+ L+ +LEE+FD++G L + +W++ +T PW EFC+MV+KI I+ Sbjct: 494 LRSPTEIQSKQFSSTRTCTKVQMQGVTIERAVDLSVLNGYDQLILELEELFDLKGQL-QTRNQWEIAFTDSDDDKMLVGDDPWPEFCNMVKKILIF 588
BLAST of DY259866 vs. ExPASy Swiss-Prot
Match: ARFO_ARATH (Putative auxin response factor 15 OS=Arabidopsis thaliana GN=ARF15 PE=3 SV=2) HSP 1 Score: 85.1149 bits (209), Expect = 6.056e-16 Identity = 40/95 (42.11%), Postives = 64/95 (67.37%), Query Frame = 1 Query: 7 LRSPQESQSRQI---RSCTKVHMQGIAVGRAVDLTRFDCYEDLLKKLEEMFDIEGDLCGSTKKWQVVYTXXXXXXXXXXXXPWHEFCSMVRKIFI 282 LRSP + QS+Q R+CTKV MQG+ +GRAVDL+ + Y+ L+ +LE++FD++G L + +W++++T PW EFC+MV++I+I Sbjct: 496 LRSPTKIQSKQFSSTRTCTKVQMQGVTIGRAVDLSVLNGYDQLILELEKLFDLKGQL-QTRNQWKIIFTGSDEDEMLVGDDPWPEFCNMVKRIYI 589 The following BLAST results are available for this feature:
BLAST of DY259866 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 20
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Sequences
The
following sequences are available for this feature:
EST sequence >DY259866 ID=DY259866; Name=DY259866; organism=Citrus clementina; type=EST; length=912bpback to top |