DY259870

Overview
NameDY259870
Unique NameDY259870
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length962
Libraries
Library NameType
Fruit-TFcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY259870 vs. ExPASy Swiss-Prot
Match: 1433B_SHEEP (14-3-3 protein beta/alpha (Fragments) OS=Ovis aries GN=YWHAB PE=1 SV=2)

HSP 1 Score: 187.578 bits (475), Expect = 9.315e-47
Identity = 116/227 (51.10%), Postives = 137/227 (60.35%), Query Frame = 2
Query:   74 REENVYMAKLAEQAERYEEMVEFMEKVAKTVDVEELTVEERNLLSVAYKNVIGARRASWRIISSIEQKEESRGNEDHVSVIKEYRSKIENELSKICDGILSLLESHLIPSASSAESKVFYLKMKGDYHRYLAEFKTGAERKEAAESTLLAYKSAQDIALAELAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKHAFDEAISELDTLGEESYKDSTLIMQLLQDNL 754
            + E V  AKLAEQAERY++M   M+ V  T    EL+ EERNLLSVAYKNV+GARR+SWR+ISSIEQK E   NE    + KEY                                     KMKGDY RYL+E  +G  ++    ++  AY+ A +I+  E+ PTHPIRLGLALNFSVFYYEILNSP            EAI+ELDTL EESYKDSTLIMQLL+DNL
Sbjct:    5 KSELVQKAKLAEQAERYDDMAAAMKAV--TEQGHELSNEERNLLSVAYKNVVGARRSSWRVISSIEQKTER--NEKKQQMGKEY-------------------------------------KMKGDYFRYLSEVASGDNKQTTVSNSQQAYQEAFEISKKEMQPTHPIRLGLALNFSVFYYEILNSP------------EAIAELDTLNEESYKDSTLIMQLLRDNL 178          
BLAST of DY259870 vs. ExPASy Swiss-Prot
Match: 1433G_SHEEP (14-3-3 protein gamma (Fragments) OS=Ovis aries GN=YWHAG PE=1 SV=1)

HSP 1 Score: 157.918 bits (398), Expect = 7.904e-38
Identity = 96/194 (49.48%), Postives = 112/194 (57.73%), Query Frame = 2
Query:  173 EELTVEERNLLSVAYKNVIGARRASWRIISSIEQKEESRGNEDHVSVIKEYRSKIENELSKICDGILSLLESHLIPSASSAESKVFYLKMKGDYHRYLAEFKTGAERKEAAESTLLAYKSAQDIALAELAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKHAFDEAISELDTLGEESYKDSTLIMQLLQDNL 754
            E L+ EERNLLSVAYKNV+GARR+SWR+ISS                       IE + S                         FYLKMKGDY+RYLAE  TG +R    ES+  AY  A +I+   + PTHPIRLGLALN+SVFYYEI             AFD+AI+ELDTL E+SYKDSTLIMQLL+DNL
Sbjct:   12 EPLSNEERNLLSVAYKNVVGARRSSWRVISS-----------------------IEQKTS-------------------------FYLKMKGDYYRYLAEVATGEKRATVVESSEKAYSEAHEISKEHMQPTHPIRLGLALNYSVFYYEIT------------AFDDAIAELDTLNEDSYKDSTLIMQLLRDNL 145          
BLAST of DY259870 vs. ExPASy Swiss-Prot
Match: 1433X_MAIZE (14-3-3-like protein (Fragment) OS=Zea mays PE=3 SV=1)

HSP 1 Score: 85.1149 bits (209), Expect = 9.491e-18
Identity = 42/45 (93.33%), Postives = 43/45 (95.56%), Query Frame = 2
Query:  620 ILNSPDRACNLAKHAFDEAISELDTLGEESYKDSTLIMQLLQDNL 754
            ILNSPDRACNLAK AFDEAISELD+LGEESYKDSTLIMQLL DNL
Sbjct:    1 ILNSPDRACNLAKQAFDEAISELDSLGEESYKDSTLIMQLLXDNL 45          

HSP 2 Score: 26.9498 bits (58), Expect = 9.491e-18
Identity = 10/15 (66.67%), Postives = 13/15 (86.67%), Query Frame = 3
Query:  756 TLWTSDIHEEAGNEI 800
            TLWTSD +E+ G+EI
Sbjct:   46 TLWTSDTNEDGGDEI 60          
BLAST of DY259870 vs. ExPASy Swiss-Prot
Match: 14331_PSEMZ (14-3-3-like protein 1 (Fragments) OS=Pseudotsuga menziesii PE=1 SV=1)

HSP 1 Score: 76.2554 bits (186), Expect = 3.024e-13
Identity = 63/153 (41.18%), Postives = 68/153 (44.44%), Query Frame = 2
Query:  122 YEEMVEFMEKVAKTVDVEELTVEERNLLSVAYKNVIGARRASWRIISSIEQKEESRGNEDHVSVIKEYRSKIENELSKICDGILSLLESHLIPSASSAESKVFYLKMKGDYHRYLAEFKTGAERKEAAESTLLAYKSAQDIALAELAPTHPIR 580
            YEEMVEFMEK               NLLSVAYK           IISSIEQKEESR                      IC+GIL LL+SHLIPS+++AES                                   KSAQDIA AELAPTHPIR
Sbjct:    1 YEEMVEFMEK---------------NLLSVAYK-----------IISSIEQKEESR----------------------ICEGILRLLDSHLIPSSTAAES-----------------------------------KSAQDIAAAELAPTHPIR 70          
The following BLAST results are available for this feature:
BLAST of DY259870 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 144
Match NameE-valueIdentityDescription
1433B_SHEEP9.315e-4751.1014-3-3 protein beta/alpha (Fragments) OS=Ovis arie... [more]
1433G_SHEEP7.904e-3849.4814-3-3 protein gamma (Fragments) OS=Ovis aries GN=... [more]
1433X_MAIZE9.491e-1893.3314-3-3-like protein (Fragment) OS=Zea mays PE=3 SV... [more]
14331_PSEMZ3.024e-1341.1814-3-3-like protein 1 (Fragments) OS=Pseudotsuga m... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAP10YH11FM1 Fruit-TF Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY259870 ID=DY259870; Name=DY259870; organism=Citrus clementina; type=EST; length=962bp
TCTTCTCTAAAATTTAGATCGAATCCGTATTCCCAAACCTTAAAACGCTA
AGATGTCGCCTACTGATTCTTCTCGCGAGGAAAATGTCTACATGGCCAAG
CTGGCCGAGCAGGCTGAACGTTATGAGGAAATGGTTGAGTTCATGGAAAA
AGTTGCAAAAACAGTTGATGTTGAGGAGCTAACCGTGGAGGAAAGGAACC
TTCTCTCAGTTGCTTACAAGAATGTGATTGGGGCCAGGAGGGCTTCATGG
AGGATCATCTCTTCGATTGAGCAGAAGGAGGAGAGCAGGGGAAACGAAGA
CCATGTCTCAGTAATTAAGGAGTACAGGAGCAAGATTGAGAATGAGCTCA
GCAAGATCTGTGATGGGATTCTTAGCCTCCTTGAGTCTCATCTCATTCCC
TCTGCCTCATCGGCTGAGTCTAAGGTGTTCTACCTGAAGATGAAGGGTGA
TTACCACAGGTATTTGGCTGAGTTCAAGACTGGAGCTGAGAGGAAGGAAG
CTGCGGAGAGCACTTTGTTGGCCTACAAGTCAGCTCAGGATATTGCTTTA
GCTGAATTGGCCCCTACTCACCCCATAAGGCTGGGACTTGCACTCAACTT
CTCTGTGTTCTACTATGAAATCCTTAACTCACCAGATCGTGCATGCAATC
TTGCGAAGCATGCTTTTGATGAGGCCATTTCTGAGCTTGATACCTTGGGT
GAAGAATCATACAAGGACAGTACATTGATTATGCAGCTTCTCCAAGATAA
TCTGGACACTTTGGACTTCTGATATCCACGAGGAAGCTGGAAATGAGATT
AACGGAGCACCATCAAAACGTGAATCAGGGGAAACCCACCAAGGATGAAA
AAAGAGTCAATTCAAAAGATAGTTTCCGGTATTTTATCCTGGGGCTTTTT
TTTTACATGGAGGCCAAGGGGGTTGTTCTACCAGGAATTTCCCTCTAACG
AGAACCCTTGTT
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