DY259871

Overview
NameDY259871
Unique NameDY259871
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length1150
Libraries
Library NameType
Fruit-TFcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY259871 vs. ExPASy Swiss-Prot
Match: DNJ6B_XENLA (DnaJ homolog subfamily B member 6-B OS=Xenopus laevis GN=dnajb6-B PE=2 SV=1)

HSP 1 Score: 71.2478 bits (173), Expect = 1.250e-11
Identity = 37/76 (48.68%), Postives = 48/76 (63.16%), Query Frame = 3
Query:  153 ELYALLHLSPEASDEEIRKAYRQWAQVYHPDKYQAPHMKEIATENFQRICEAYEILSDENKRLIYDIYGMEGLTSG 380
            E Y +L +   +S ++I+KAYR+ A  +HPDK   P  KE A   F+ + EAYE+LSD  KR IYD YG EGL  G
Sbjct:    3 EYYDVLGVQRNSSPDDIKKAYRRLALKWHPDKN--PDNKEEAERRFKEVAEAYEVLSDSKKRDIYDKYGKEGLAGG 76          
BLAST of DY259871 vs. ExPASy Swiss-Prot
Match: DNJ6A_XENLA (DnaJ homolog subfamily B member 6-A OS=Xenopus laevis GN=dnajb6-A PE=2 SV=1)

HSP 1 Score: 71.2478 bits (173), Expect = 1.250e-11
Identity = 37/75 (49.33%), Postives = 49/75 (65.33%), Query Frame = 3
Query:  153 ELYALLHLSPEASDEEIRKAYRQWAQVYHPDKYQAPHMKEIATENFQRICEAYEILSDENKRLIYDIYGMEGLTS 377
            E Y +L +   AS ++I+KAYR+ A  +HPDK   P  K+ A   F+ + EAYE+LSD  KR IYD YG EGLT+
Sbjct:    3 EYYEVLGVQRNASADDIKKAYRRLALKWHPDKN--PDNKDEAERRFKEVAEAYEVLSDSKKRDIYDKYGKEGLTN 75          
BLAST of DY259871 vs. ExPASy Swiss-Prot
Match: DNAJ_MYCGA (Chaperone protein dnaJ OS=Mycoplasma gallisepticum GN=dnaJ PE=3 SV=2)

HSP 1 Score: 71.2478 bits (173), Expect = 1.250e-11
Identity = 37/82 (45.12%), Postives = 52/82 (63.41%), Query Frame = 3
Query:  150 RELYALLHLSPEASDEEIRKAYRQWAQVYHPDKYQAPHMKEIATENFQRICEAYEILSDENKRLIYDIYGMEGL-TSGLELG 392
            R+ Y +L +S  A+ ++I+KA+R+ A  YHPD+    +    A E F+ + EAYE+LSDE KR +YD YG EGL  SG   G
Sbjct:    5 RDYYEILEVSRSATQQDIKKAFRKLAMKYHPDR----NKDSDAEEKFKEVNEAYEVLSDEEKRKLYDTYGHEGLNASGFHQG 82          
BLAST of DY259871 vs. ExPASy Swiss-Prot
Match: SIS1_YEAST (Protein SIS1 OS=Saccharomyces cerevisiae GN=SIS1 PE=1 SV=1)

HSP 1 Score: 70.8626 bits (172), Expect = 1.632e-11
Identity = 37/76 (48.68%), Postives = 49/76 (64.47%), Query Frame = 3
Query:  153 ELYALLHLSPEASDEEIRKAYRQWAQVYHPDKYQAPHMKEIATENFQRICEAYEILSDENKRLIYDIYGMEGLTSG 380
            +LY LL +SP A+++E++K YR+ A  YHPDK          TE F+ I EA+EIL+D  KR IYD YG+E   SG
Sbjct:    6 KLYDLLGVSPSANEQELKKGYRKAALKYHPDKPTGD------TEKFKEISEAFEILNDPQKREIYDQYGLEAARSG 75          
BLAST of DY259871 vs. ExPASy Swiss-Prot
Match: DNAJ_POLSJ (Chaperone protein dnaJ OS=Polaromonas sp. (strain JS666 / ATCC BAA-500) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 70.8626 bits (172), Expect = 1.632e-11
Identity = 35/81 (43.21%), Postives = 51/81 (62.96%), Query Frame = 3
Query:  150 RELYALLHLSPEASDEEIRKAYRQWAQVYHPDKYQAPHMKEIATENFQRICEAYEILSDENKRLIYDIYGMEGLTSGLELG 392
            ++ Y  L +   ASD++I+KAYR+ A  +HPD+ Q    K ++ E F+   EAYE+LSDENKR+ YD YG  G+   +  G
Sbjct:    4 KDYYDTLGVPKNASDDDIKKAYRKLAMKHHPDRNQGDKSK-VSEEKFKEAKEAYEVLSDENKRMAYDQYGHAGVDPNMRGG 83          
BLAST of DY259871 vs. ExPASy Swiss-Prot
Match: DNAJ_STAS1 (Chaperone protein dnaJ OS=Staphylococcus saprophyticus subsp. saprophyticus (strain ATCC 15305 / DSM 20229) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 2.132e-11
Identity = 37/77 (48.05%), Postives = 51/77 (66.23%), Query Frame = 3
Query:  150 RELYALLHLSPEASDEEIRKAYRQWAQVYHPDKYQAPHMKEIATENFQRICEAYEILSDENKRLIYDIYGMEGLTSG 380
            R+ Y +L +S  AS +EI+KAYR+ ++ YHPD     + +E A E F+ I EAYE+LSDENKR  YD +G +G   G
Sbjct:    4 RDYYEVLGVSKSASKDEIKKAYRKLSKQYHPDI----NKEEGADEKFKEISEAYEVLSDENKRANYDQFGHDGPQGG 76          
BLAST of DY259871 vs. ExPASy Swiss-Prot
Match: DNAJ_COLMA (Chaperone protein dnaJ OS=Colwellia maris GN=dnaJ PE=3 SV=2)

HSP 1 Score: 70.4774 bits (171), Expect = 2.132e-11
Identity = 35/77 (45.45%), Postives = 48/77 (62.34%), Query Frame = 3
Query:  150 RELYALLHLSPEASDEEIRKAYRQWAQVYHPDKYQAPHMKEIATENFQRICEAYEILSDENKRLIYDIYGMEGLTSG 380
            R+ Y  L +S +AS++EI+KAY++ A  YHPD+ Q    KE   E F+ + EAYEIL+D+ KR  YD YG      G
Sbjct:    4 RDYYETLEVSQDASEKEIKKAYKKLAMKYHPDRTQGDKSKE---ETFKEVKEAYEILNDDQKRAAYDQYGHAAFEQG 77          
BLAST of DY259871 vs. ExPASy Swiss-Prot
Match: DNAJ_ACISJ (Chaperone protein dnaJ OS=Acidovorax sp. (strain JS42) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 2.132e-11
Identity = 38/81 (46.91%), Postives = 48/81 (59.26%), Query Frame = 3
Query:  150 RELYALLHLSPEASDEEIRKAYRQWAQVYHPDKYQAPHMKEIATENFQRICEAYEILSDENKRLIYDIYGMEGLTSGLELG 392
            R+ Y +L +   ASD+EI+KAYR+ A  YHPD+ Q    K  A E F+   EAYEILSD  KR  YD YG  G+   +  G
Sbjct:    4 RDFYEVLGVPKNASDDEIKKAYRKLAMKYHPDRNQGDAAKP-AEEKFKEAKEAYEILSDAQKRAAYDQYGHAGVDPNMRGG 83          
BLAST of DY259871 vs. ExPASy Swiss-Prot
Match: DNJB7_HUMAN (DnaJ homolog subfamily B member 7 OS=Homo sapiens GN=DNAJB7 PE=2 SV=2)

HSP 1 Score: 70.0922 bits (170), Expect = 2.784e-11
Identity = 37/76 (48.68%), Postives = 48/76 (63.16%), Query Frame = 3
Query:  153 ELYALLHLSPEASDEEIRKAYRQWAQVYHPDKYQAPHMKEIATENFQRICEAYEILSDENKRLIYDIYGMEGLTSG 380
            + Y +L L   AS E+I+KAY + A  +HPDK   P  KE A   F+ + EAYE+LS++ KR IYD YG EGL  G
Sbjct:    3 DYYEVLGLQRYASPEDIKKAYHKVALKWHPDKN--PENKEEAERKFKEVAEAYEVLSNDEKRDIYDKYGTEGLNGG 76          
BLAST of DY259871 vs. ExPASy Swiss-Prot
Match: DNAJ_STAEQ (Chaperone protein dnaJ OS=Staphylococcus epidermidis (strain ATCC 35984 / RP62A) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 2.784e-11
Identity = 36/77 (46.75%), Postives = 52/77 (67.53%), Query Frame = 3
Query:  150 RELYALLHLSPEASDEEIRKAYRQWAQVYHPDKYQAPHMKEIATENFQRICEAYEILSDENKRLIYDIYGMEGLTSG 380
            R+ Y +L ++  AS +EI+KAYR+ ++ YHPD     + +E A E F+ I EAYE+LSDENKR+ YD +G +G   G
Sbjct:    4 RDYYEVLGVNKSASKDEIKKAYRKLSKKYHPDI----NKEEGADEKFKEISEAYEVLSDENKRVNYDQFGHDGPQGG 76          
The following BLAST results are available for this feature:
BLAST of DY259871 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 70
Match NameE-valueIdentityDescription
DNJ6B_XENLA1.250e-1148.68DnaJ homolog subfamily B member 6-B OS=Xenopus lae... [more]
DNJ6A_XENLA1.250e-1149.33DnaJ homolog subfamily B member 6-A OS=Xenopus lae... [more]
DNAJ_MYCGA1.250e-1145.12Chaperone protein dnaJ OS=Mycoplasma gallisepticum... [more]
SIS1_YEAST1.632e-1148.68Protein SIS1 OS=Saccharomyces cerevisiae GN=SIS1 P... [more]
DNAJ_POLSJ1.632e-1143.21Chaperone protein dnaJ OS=Polaromonas sp. (strain ... [more]
DNAJ_STAS12.132e-1148.05Chaperone protein dnaJ OS=Staphylococcus saprophyt... [more]
DNAJ_COLMA2.132e-1145.45Chaperone protein dnaJ OS=Colwellia maris GN=dnaJ ... [more]
DNAJ_ACISJ2.132e-1146.91Chaperone protein dnaJ OS=Acidovorax sp. (strain J... [more]
DNJB7_HUMAN2.784e-1148.68DnaJ homolog subfamily B member 7 OS=Homo sapiens ... [more]
DNAJ_STAEQ2.784e-1146.75Chaperone protein dnaJ OS=Staphylococcus epidermid... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAP10YH12FM1 Fruit-TF Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY259871 ID=DY259871; Name=DY259871; organism=Citrus clementina; type=EST; length=1150bp
GGAGTAATGCATCTCTCTCTTCTAACATGTTGGATGTCGAAGAACGAACT
GAGTTCACTTTTTCTTTGAGATTCTGAGGACCCAAGAGAGAAAAAAAAAA
AAGAAGAAAAAAGTCAAAGATGAGGGAAGCAAAGGACGGGCCGCCAAACA
GGGAATTGTATGCACTGTTGCATCTTTCGCCGGAAGCCTCCGATGAAGAA
ATCAGAAAAGCTTATCGCCAGTGGGCCCAAGTCTATCACCCTGATAAATA
TCAAGCTCCTCATATGAAGGAAATTGCTACAGAGAACTTTCAGAGGATAT
GTGAAGCGTACGAAATATTATCAGATGAGAATAAGCGGCTGATATATGAT
ATATATGGTATGGAAGGATTGACTTCTGGGTTGGAACTTGGTCCAAAGCT
AAATAAAGTGGAAGAGTTAAAGGAAGAGCTTGAAAGGCTACGGCAGAGGA
AGGAACAAGAGAAGGCTTTAGCACATTTTCGTCCTTCTGGGACGATACTG
GCCAGCTTCTCTTTGCCACAGTTTCTAGAGGGTGATGGCATAATGAGAGG
GATGGCTATGAGTAGTGAAGTTCAGTCTCAACTATCTAAAAACAGTATTC
TTGCTTTTGGTGGAAATTTGGAAGTAAATGATGATTCTGGTGGTGGAGCT
GCTTCAGTTGTGCTTAGGCATCAGTTGTCCTCTGTCTCATCTATAGAATT
TATAGCTTCAGCTGGTTTACGGGCACTGGTTGGAATACAAACCACCCGGT
AGCTCATTTGTTTTGATGTGTCCTTTTGACTATTTGGCCTATAAACTTTG
TTCCCTTTTATTTTCTCATTTTATAGTCCCCCTACCATCACATTCCACCG
GCAAAAATGGCCGTTGGCCATGTCTTTGAAAAATGGCCCCCTTAATCCTT
TCCAAAAACCGGGACCCCGCCAGATCCCCCGAACCAACGAAAGGGGAAAA
AACCGCCCCTTGGTGGGGTAAAAAGCCTACCATTTCCGGTTGGGGGGGCA
AAAAAAAAAAAGAAAAAAAGGTCTCGCCGGGGGGGGAAGACCTTTAAAAA
TGGGGCCCAAATTTTCTTTTTGGGGGCCATCCCCCCTCCTTTTATATCCC
CCCGGGGTTTTTCCCAAAAAAACCCCCGGGGGGGCCGAAATACAGGGGGG
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