DY259871

Overview
NameDY259871
Unique NameDY259871
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length1150
Libraries
Library NameType
Fruit-TFcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig1337 contig Ccv1_Contig1337:1..1150. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
[Close]
BLAST of DY259871 vs. ExPASy Swiss-Prot
Match: DNAJ_STAAW (Chaperone protein dnaJ OS=Staphylococcus aureus (strain MW2) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 2.784e-11
Identity = 35/73 (47.95%), Postives = 51/73 (69.86%), Query Frame = 3 
Query:  150 RELYALLHLSPEASDEEIRKAYRQWAQVYHPDKYQAPHMKEIATENFQRICEAYEILSDENKRLIYDIYGMEG 368
            R+ Y +L +S +AS +EI+KAYR+ ++ YHPD     + +E A E F+ I EAYE+LSD+NKR  YD +G +G
Sbjct:    4 RDYYEVLGISKDASKDEIKKAYRKLSKKYHPDI----NKEEGADEKFKEISEAYEVLSDDNKRASYDQFGHDG 72
[Close]
BLAST of DY259871 vs. ExPASy Swiss-Prot
Match: DNAJ_STAAT (Chaperone protein dnaJ OS=Staphylococcus aureus (strain USA300 / TCH1516) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 2.784e-11
Identity = 35/73 (47.95%), Postives = 51/73 (69.86%), Query Frame = 3 
Query:  150 RELYALLHLSPEASDEEIRKAYRQWAQVYHPDKYQAPHMKEIATENFQRICEAYEILSDENKRLIYDIYGMEG 368
            R+ Y +L +S +AS +EI+KAYR+ ++ YHPD     + +E A E F+ I EAYE+LSD+NKR  YD +G +G
Sbjct:    4 RDYYEVLGISKDASKDEIKKAYRKLSKKYHPDI----NKEEGADEKFKEISEAYEVLSDDNKRASYDQFGHDG 72
[Close]
BLAST of DY259871 vs. ExPASy Swiss-Prot
Match: DNAJ_STAAS (Chaperone protein dnaJ OS=Staphylococcus aureus (strain MSSA476) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 2.784e-11
Identity = 35/73 (47.95%), Postives = 51/73 (69.86%), Query Frame = 3 
Query:  150 RELYALLHLSPEASDEEIRKAYRQWAQVYHPDKYQAPHMKEIATENFQRICEAYEILSDENKRLIYDIYGMEG 368
            R+ Y +L +S +AS +EI+KAYR+ ++ YHPD     + +E A E F+ I EAYE+LSD+NKR  YD +G +G
Sbjct:    4 RDYYEVLGISKDASKDEIKKAYRKLSKKYHPDI----NKEEGADEKFKEISEAYEVLSDDNKRASYDQFGHDG 72
[Close]
BLAST of DY259871 vs. ExPASy Swiss-Prot
Match: DNAJ_STAAR (Chaperone protein dnaJ OS=Staphylococcus aureus (strain MRSA252) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 2.784e-11
Identity = 35/73 (47.95%), Postives = 51/73 (69.86%), Query Frame = 3 
Query:  150 RELYALLHLSPEASDEEIRKAYRQWAQVYHPDKYQAPHMKEIATENFQRICEAYEILSDENKRLIYDIYGMEG 368
            R+ Y +L +S +AS +EI+KAYR+ ++ YHPD     + +E A E F+ I EAYE+LSD+NKR  YD +G +G
Sbjct:    4 RDYYEVLGISKDASKDEIKKAYRKLSKKYHPDI----NKEEGADEKFKEISEAYEVLSDDNKRASYDQFGHDG 72
[Close]
BLAST of DY259871 vs. ExPASy Swiss-Prot
Match: DNAJ_STAAN (Chaperone protein dnaJ OS=Staphylococcus aureus (strain N315) GN=dnaJ PE=1 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 2.784e-11
Identity = 35/73 (47.95%), Postives = 51/73 (69.86%), Query Frame = 3 
Query:  150 RELYALLHLSPEASDEEIRKAYRQWAQVYHPDKYQAPHMKEIATENFQRICEAYEILSDENKRLIYDIYGMEG 368
            R+ Y +L +S +AS +EI+KAYR+ ++ YHPD     + +E A E F+ I EAYE+LSD+NKR  YD +G +G
Sbjct:    4 RDYYEVLGISKDASKDEIKKAYRKLSKKYHPDI----NKEEGADEKFKEISEAYEVLSDDNKRASYDQFGHDG 72
[Close]
BLAST of DY259871 vs. ExPASy Swiss-Prot
Match: DNAJ_STAAM (Chaperone protein dnaJ OS=Staphylococcus aureus (strain Mu50 / ATCC 700699) GN=dnaJ PE=1 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 2.784e-11
Identity = 35/73 (47.95%), Postives = 51/73 (69.86%), Query Frame = 3 
Query:  150 RELYALLHLSPEASDEEIRKAYRQWAQVYHPDKYQAPHMKEIATENFQRICEAYEILSDENKRLIYDIYGMEG 368
            R+ Y +L +S +AS +EI+KAYR+ ++ YHPD     + +E A E F+ I EAYE+LSD+NKR  YD +G +G
Sbjct:    4 RDYYEVLGISKDASKDEIKKAYRKLSKKYHPDI----NKEEGADEKFKEISEAYEVLSDDNKRASYDQFGHDG 72
[Close]
BLAST of DY259871 vs. ExPASy Swiss-Prot
Match: DNAJ_STAAE (Chaperone protein dnaJ OS=Staphylococcus aureus (strain Newman) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 2.784e-11
Identity = 35/73 (47.95%), Postives = 51/73 (69.86%), Query Frame = 3 
Query:  150 RELYALLHLSPEASDEEIRKAYRQWAQVYHPDKYQAPHMKEIATENFQRICEAYEILSDENKRLIYDIYGMEG 368
            R+ Y +L +S +AS +EI+KAYR+ ++ YHPD     + +E A E F+ I EAYE+LSD+NKR  YD +G +G
Sbjct:    4 RDYYEVLGISKDASKDEIKKAYRKLSKKYHPDI----NKEEGADEKFKEISEAYEVLSDDNKRASYDQFGHDG 72
[Close]
BLAST of DY259871 vs. ExPASy Swiss-Prot
Match: DNAJ_STAAC (Chaperone protein dnaJ OS=Staphylococcus aureus (strain COL) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 2.784e-11
Identity = 35/73 (47.95%), Postives = 51/73 (69.86%), Query Frame = 3 
Query:  150 RELYALLHLSPEASDEEIRKAYRQWAQVYHPDKYQAPHMKEIATENFQRICEAYEILSDENKRLIYDIYGMEG 368
            R+ Y +L +S +AS +EI+KAYR+ ++ YHPD     + +E A E F+ I EAYE+LSD+NKR  YD +G +G
Sbjct:    4 RDYYEVLGISKDASKDEIKKAYRKLSKKYHPDI----NKEEGADEKFKEISEAYEVLSDDNKRASYDQFGHDG 72
[Close]
BLAST of DY259871 vs. ExPASy Swiss-Prot
Match: DNAJ_STAAB (Chaperone protein dnaJ OS=Staphylococcus aureus (strain bovine RF122 / ET3-1) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 2.784e-11
Identity = 35/73 (47.95%), Postives = 51/73 (69.86%), Query Frame = 3 
Query:  150 RELYALLHLSPEASDEEIRKAYRQWAQVYHPDKYQAPHMKEIATENFQRICEAYEILSDENKRLIYDIYGMEG 368
            R+ Y +L +S +AS +EI+KAYR+ ++ YHPD     + +E A E F+ I EAYE+LSD+NKR  YD +G +G
Sbjct:    4 RDYYEVLGISKDASKDEIKKAYRKLSKKYHPDI----NKEEGADEKFKEISEAYEVLSDDNKRASYDQFGHDG 72
[Close]
BLAST of DY259871 vs. ExPASy Swiss-Prot
Match: DNAJ_STAA9 (Chaperone protein dnaJ OS=Staphylococcus aureus (strain JH9) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 2.784e-11
Identity = 35/73 (47.95%), Postives = 51/73 (69.86%), Query Frame = 3 
Query:  150 RELYALLHLSPEASDEEIRKAYRQWAQVYHPDKYQAPHMKEIATENFQRICEAYEILSDENKRLIYDIYGMEG 368
            R+ Y +L +S +AS +EI+KAYR+ ++ YHPD     + +E A E F+ I EAYE+LSD+NKR  YD +G +G
Sbjct:    4 RDYYEVLGISKDASKDEIKKAYRKLSKKYHPDI----NKEEGADEKFKEISEAYEVLSDDNKRASYDQFGHDG 72
The following BLAST results are available for this feature:
BLAST of DY259871 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 70
Match NameE-valueIdentityDescription
DNAJ_STAAW2.784e-1147.95Chaperone protein dnaJ OS=Staphylococcus aureus (s... [more]
DNAJ_STAAT2.784e-1147.95Chaperone protein dnaJ OS=Staphylococcus aureus (s... [more]
DNAJ_STAAS2.784e-1147.95Chaperone protein dnaJ OS=Staphylococcus aureus (s... [more]
DNAJ_STAAR2.784e-1147.95Chaperone protein dnaJ OS=Staphylococcus aureus (s... [more]
DNAJ_STAAN2.784e-1147.95Chaperone protein dnaJ OS=Staphylococcus aureus (s... [more]
DNAJ_STAAM2.784e-1147.95Chaperone protein dnaJ OS=Staphylococcus aureus (s... [more]
DNAJ_STAAE2.784e-1147.95Chaperone protein dnaJ OS=Staphylococcus aureus (s... [more]
DNAJ_STAAC2.784e-1147.95Chaperone protein dnaJ OS=Staphylococcus aureus (s... [more]
DNAJ_STAAB2.784e-1147.95Chaperone protein dnaJ OS=Staphylococcus aureus (s... [more]
DNAJ_STAA92.784e-1147.95Chaperone protein dnaJ OS=Staphylococcus aureus (s... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAP10YH12FM1 Fruit-TF Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY259871 ID=DY259871; Name=DY259871; organism=Citrus clementina; type=EST; length=1150bp
GGAGTAATGCATCTCTCTCTTCTAACATGTTGGATGTCGAAGAACGAACT
GAGTTCACTTTTTCTTTGAGATTCTGAGGACCCAAGAGAGAAAAAAAAAA
AAGAAGAAAAAAGTCAAAGATGAGGGAAGCAAAGGACGGGCCGCCAAACA
GGGAATTGTATGCACTGTTGCATCTTTCGCCGGAAGCCTCCGATGAAGAA
ATCAGAAAAGCTTATCGCCAGTGGGCCCAAGTCTATCACCCTGATAAATA
TCAAGCTCCTCATATGAAGGAAATTGCTACAGAGAACTTTCAGAGGATAT
GTGAAGCGTACGAAATATTATCAGATGAGAATAAGCGGCTGATATATGAT
ATATATGGTATGGAAGGATTGACTTCTGGGTTGGAACTTGGTCCAAAGCT
AAATAAAGTGGAAGAGTTAAAGGAAGAGCTTGAAAGGCTACGGCAGAGGA
AGGAACAAGAGAAGGCTTTAGCACATTTTCGTCCTTCTGGGACGATACTG
GCCAGCTTCTCTTTGCCACAGTTTCTAGAGGGTGATGGCATAATGAGAGG
GATGGCTATGAGTAGTGAAGTTCAGTCTCAACTATCTAAAAACAGTATTC
TTGCTTTTGGTGGAAATTTGGAAGTAAATGATGATTCTGGTGGTGGAGCT
GCTTCAGTTGTGCTTAGGCATCAGTTGTCCTCTGTCTCATCTATAGAATT
TATAGCTTCAGCTGGTTTACGGGCACTGGTTGGAATACAAACCACCCGGT
AGCTCATTTGTTTTGATGTGTCCTTTTGACTATTTGGCCTATAAACTTTG
TTCCCTTTTATTTTCTCATTTTATAGTCCCCCTACCATCACATTCCACCG
GCAAAAATGGCCGTTGGCCATGTCTTTGAAAAATGGCCCCCTTAATCCTT
TCCAAAAACCGGGACCCCGCCAGATCCCCCGAACCAACGAAAGGGGAAAA
AACCGCCCCTTGGTGGGGTAAAAAGCCTACCATTTCCGGTTGGGGGGGCA
AAAAAAAAAAAGAAAAAAAGGTCTCGCCGGGGGGGGAAGACCTTTAAAAA
TGGGGCCCAAATTTTCTTTTTGGGGGCCATCCCCCCTCCTTTTATATCCC
CCCGGGGTTTTTCCCAAAAAAACCCCCGGGGGGGCCGAAATACAGGGGGG
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