DY259871

Overview
NameDY259871
Unique NameDY259871
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length1150
Libraries
Library NameType
Fruit-TFcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY259871 vs. ExPASy Swiss-Prot
Match: DNAJ_STAA8 (Chaperone protein dnaJ OS=Staphylococcus aureus (strain NCTC 8325) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 2.784e-11
Identity = 35/73 (47.95%), Postives = 51/73 (69.86%), Query Frame = 3
Query:  150 RELYALLHLSPEASDEEIRKAYRQWAQVYHPDKYQAPHMKEIATENFQRICEAYEILSDENKRLIYDIYGMEG 368
            R+ Y +L +S +AS +EI+KAYR+ ++ YHPD     + +E A E F+ I EAYE+LSD+NKR  YD +G +G
Sbjct:    4 RDYYEVLGISKDASKDEIKKAYRKLSKKYHPDI----NKEEGADEKFKEISEAYEVLSDDNKRASYDQFGHDG 72          
BLAST of DY259871 vs. ExPASy Swiss-Prot
Match: DNAJ_STAA3 (Chaperone protein dnaJ OS=Staphylococcus aureus (strain USA300) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 2.784e-11
Identity = 35/73 (47.95%), Postives = 51/73 (69.86%), Query Frame = 3
Query:  150 RELYALLHLSPEASDEEIRKAYRQWAQVYHPDKYQAPHMKEIATENFQRICEAYEILSDENKRLIYDIYGMEG 368
            R+ Y +L +S +AS +EI+KAYR+ ++ YHPD     + +E A E F+ I EAYE+LSD+NKR  YD +G +G
Sbjct:    4 RDYYEVLGISKDASKDEIKKAYRKLSKKYHPDI----NKEEGADEKFKEISEAYEVLSDDNKRASYDQFGHDG 72          
BLAST of DY259871 vs. ExPASy Swiss-Prot
Match: DNAJ_STAA2 (Chaperone protein dnaJ OS=Staphylococcus aureus (strain JH1) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 2.784e-11
Identity = 35/73 (47.95%), Postives = 51/73 (69.86%), Query Frame = 3
Query:  150 RELYALLHLSPEASDEEIRKAYRQWAQVYHPDKYQAPHMKEIATENFQRICEAYEILSDENKRLIYDIYGMEG 368
            R+ Y +L +S +AS +EI+KAYR+ ++ YHPD     + +E A E F+ I EAYE+LSD+NKR  YD +G +G
Sbjct:    4 RDYYEVLGISKDASKDEIKKAYRKLSKKYHPDI----NKEEGADEKFKEISEAYEVLSDDNKRASYDQFGHDG 72          
BLAST of DY259871 vs. ExPASy Swiss-Prot
Match: DNAJ_STAA1 (Chaperone protein dnaJ OS=Staphylococcus aureus (strain Mu3 / ATCC 700698) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 2.784e-11
Identity = 35/73 (47.95%), Postives = 51/73 (69.86%), Query Frame = 3
Query:  150 RELYALLHLSPEASDEEIRKAYRQWAQVYHPDKYQAPHMKEIATENFQRICEAYEILSDENKRLIYDIYGMEG 368
            R+ Y +L +S +AS +EI+KAYR+ ++ YHPD     + +E A E F+ I EAYE+LSD+NKR  YD +G +G
Sbjct:    4 RDYYEVLGISKDASKDEIKKAYRKLSKKYHPDI----NKEEGADEKFKEISEAYEVLSDDNKRASYDQFGHDG 72          
BLAST of DY259871 vs. ExPASy Swiss-Prot
Match: DNAJ_RALEH (Chaperone protein dnaJ OS=Ralstonia eutropha (strain ATCC 17699 / H16 / DSM 428 / Stanier 337) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 2.784e-11
Identity = 35/81 (43.21%), Postives = 49/81 (60.49%), Query Frame = 3
Query:  150 RELYALLHLSPEASDEEIRKAYRQWAQVYHPDKYQAPHMKEIATENFQRICEAYEILSDENKRLIYDIYGMEGLTSGLELG 392
            R+ Y +L +   ASD+EI+KAYR+ A  YHPD+       +IA E F+ + EAYE+LSD  K+  YD YG  G+   +  G
Sbjct:    4 RDYYEVLGVGKNASDDEIKKAYRKLAMKYHPDRNPEGKDGKIAEEKFKEVKEAYEMLSDPEKKAAYDQYGHAGVDPNMAGG 84          
BLAST of DY259871 vs. ExPASy Swiss-Prot
Match: DNAJ_MYCGE (Chaperone protein dnaJ OS=Mycoplasma genitalium GN=dnaJ PE=3 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 2.784e-11
Identity = 33/78 (42.31%), Postives = 54/78 (69.23%), Query Frame = 3
Query:  150 RELYALLHLSPEASDEEIRKAYRQWAQVYHPDKYQAPH--MKEIATENFQRICEAYEILSDENKRLIYDIYGMEGLTS 377
            R+ Y +L +S  AS ++I++A+R+ A  YHPD+++A +   ++   E F+ + EAYE+LSDE KR +YD +G EGL +
Sbjct:    6 RDYYEVLGISKNASSQDIKRAFRKLAMQYHPDRHKAENETTQKQNEEKFKEVNEAYEVLSDEEKRKLYDQFGHEGLNA 83          
BLAST of DY259871 vs. ExPASy Swiss-Prot
Match: DNAJ_DIAST (Chaperone protein dnaJ OS=Diaphorobacter sp. (strain TPSY) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 3.636e-11
Identity = 37/81 (45.68%), Postives = 48/81 (59.26%), Query Frame = 3
Query:  150 RELYALLHLSPEASDEEIRKAYRQWAQVYHPDKYQAPHMKEIATENFQRICEAYEILSDENKRLIYDIYGMEGLTSGLELG 392
            R+ Y +L +   ASD+E++KAYR+ A  YHPD+ Q    K  A E F+   EAYEILSD  KR  YD YG  G+   +  G
Sbjct:    4 RDFYEVLGVPKNASDDELKKAYRKLAMKYHPDRNQGDAAKP-AEEKFKEAKEAYEILSDAQKRAAYDQYGHAGVDPNMRGG 83          
BLAST of DY259871 vs. ExPASy Swiss-Prot
Match: DNAJ_STAES (Chaperone protein dnaJ OS=Staphylococcus epidermidis (strain ATCC 12228) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 4.749e-11
Identity = 36/77 (46.75%), Postives = 51/77 (66.23%), Query Frame = 3
Query:  150 RELYALLHLSPEASDEEIRKAYRQWAQVYHPDKYQAPHMKEIATENFQRICEAYEILSDENKRLIYDIYGMEGLTSG 380
            R+ Y +L ++  AS +EI+KAYR+ ++ YHPD     + +E A E F+ I EAYE+LSDENKR  YD +G +G   G
Sbjct:    4 RDYYEVLGVNKSASKDEIKKAYRKLSKKYHPDI----NKEEGADEKFKEISEAYEVLSDENKRANYDQFGHDGPQGG 76          
BLAST of DY259871 vs. ExPASy Swiss-Prot
Match: DNAJ_COLP3 (Chaperone protein dnaJ OS=Colwellia psychrerythraea (strain 34H / ATCC BAA-681) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 4.749e-11
Identity = 34/77 (44.16%), Postives = 48/77 (62.34%), Query Frame = 3
Query:  150 RELYALLHLSPEASDEEIRKAYRQWAQVYHPDKYQAPHMKEIATENFQRICEAYEILSDENKRLIYDIYGMEGLTSG 380
            R+ Y  L +S +AS++E++KAY++ A  YHPD+ Q    KE   E F+ + EAYEIL+D+ KR  YD YG      G
Sbjct:    4 RDYYETLGVSQDASEKEVKKAYKKLAMKYHPDRTQGDKSKE---ETFKEVKEAYEILNDDQKRAAYDQYGHAAFEQG 77          
BLAST of DY259871 vs. ExPASy Swiss-Prot
Match: DNAJ_METSS (Chaperone protein dnaJ OS=Methylovorus sp. (strain SS1 / DSM 11726) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 6.203e-11
Identity = 36/83 (43.37%), Postives = 51/83 (61.45%), Query Frame = 3
Query:  150 RELYALLHLSPEASDEEIRKAYRQWAQVYHPDKYQAPHMKEIATENFQRICEAYEILSDENKRLIYDIYGMEGLTSGLELGPK 398
            ++ Y +L ++ +ASDEEI+K+YR+ A  YHPD+       E   E+F+   EAYE+LSDE KR  YD YG  G+      GP+
Sbjct:    4 KDYYEVLGVNRDASDEEIKKSYRKLAMKYHPDRNPDNPKAE---ESFKEAKEAYEVLSDEQKRAAYDQYGHAGVDPSAGPGPR 83          
The following BLAST results are available for this feature:
BLAST of DY259871 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 70
Match NameE-valueIdentityDescription
DNAJ_STAA82.784e-1147.95Chaperone protein dnaJ OS=Staphylococcus aureus (s... [more]
DNAJ_STAA32.784e-1147.95Chaperone protein dnaJ OS=Staphylococcus aureus (s... [more]
DNAJ_STAA22.784e-1147.95Chaperone protein dnaJ OS=Staphylococcus aureus (s... [more]
DNAJ_STAA12.784e-1147.95Chaperone protein dnaJ OS=Staphylococcus aureus (s... [more]
DNAJ_RALEH2.784e-1143.21Chaperone protein dnaJ OS=Ralstonia eutropha (stra... [more]
DNAJ_MYCGE2.784e-1142.31Chaperone protein dnaJ OS=Mycoplasma genitalium GN... [more]
DNAJ_DIAST3.636e-1145.68Chaperone protein dnaJ OS=Diaphorobacter sp. (stra... [more]
DNAJ_STAES4.749e-1146.75Chaperone protein dnaJ OS=Staphylococcus epidermid... [more]
DNAJ_COLP34.749e-1144.16Chaperone protein dnaJ OS=Colwellia psychrerythrae... [more]
DNAJ_METSS6.203e-1143.37Chaperone protein dnaJ OS=Methylovorus sp. (strain... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAP10YH12FM1 Fruit-TF Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY259871 ID=DY259871; Name=DY259871; organism=Citrus clementina; type=EST; length=1150bp
GGAGTAATGCATCTCTCTCTTCTAACATGTTGGATGTCGAAGAACGAACT
GAGTTCACTTTTTCTTTGAGATTCTGAGGACCCAAGAGAGAAAAAAAAAA
AAGAAGAAAAAAGTCAAAGATGAGGGAAGCAAAGGACGGGCCGCCAAACA
GGGAATTGTATGCACTGTTGCATCTTTCGCCGGAAGCCTCCGATGAAGAA
ATCAGAAAAGCTTATCGCCAGTGGGCCCAAGTCTATCACCCTGATAAATA
TCAAGCTCCTCATATGAAGGAAATTGCTACAGAGAACTTTCAGAGGATAT
GTGAAGCGTACGAAATATTATCAGATGAGAATAAGCGGCTGATATATGAT
ATATATGGTATGGAAGGATTGACTTCTGGGTTGGAACTTGGTCCAAAGCT
AAATAAAGTGGAAGAGTTAAAGGAAGAGCTTGAAAGGCTACGGCAGAGGA
AGGAACAAGAGAAGGCTTTAGCACATTTTCGTCCTTCTGGGACGATACTG
GCCAGCTTCTCTTTGCCACAGTTTCTAGAGGGTGATGGCATAATGAGAGG
GATGGCTATGAGTAGTGAAGTTCAGTCTCAACTATCTAAAAACAGTATTC
TTGCTTTTGGTGGAAATTTGGAAGTAAATGATGATTCTGGTGGTGGAGCT
GCTTCAGTTGTGCTTAGGCATCAGTTGTCCTCTGTCTCATCTATAGAATT
TATAGCTTCAGCTGGTTTACGGGCACTGGTTGGAATACAAACCACCCGGT
AGCTCATTTGTTTTGATGTGTCCTTTTGACTATTTGGCCTATAAACTTTG
TTCCCTTTTATTTTCTCATTTTATAGTCCCCCTACCATCACATTCCACCG
GCAAAAATGGCCGTTGGCCATGTCTTTGAAAAATGGCCCCCTTAATCCTT
TCCAAAAACCGGGACCCCGCCAGATCCCCCGAACCAACGAAAGGGGAAAA
AACCGCCCCTTGGTGGGGTAAAAAGCCTACCATTTCCGGTTGGGGGGGCA
AAAAAAAAAAAGAAAAAAAGGTCTCGCCGGGGGGGGAAGACCTTTAAAAA
TGGGGCCCAAATTTTCTTTTTGGGGGCCATCCCCCCTCCTTTTATATCCC
CCCGGGGTTTTTCCCAAAAAAACCCCCGGGGGGGCCGAAATACAGGGGGG
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