DY259871

Overview
NameDY259871
Unique NameDY259871
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length1150
Libraries
Library NameType
Fruit-TFcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY259871 vs. ExPASy Swiss-Prot
Match: DNAJ_LACSS (Chaperone protein dnaJ OS=Lactobacillus sakei subsp. sakei (strain 23K) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 6.203e-11
Identity = 35/77 (45.45%), Postives = 48/77 (62.34%), Query Frame = 3
Query:  150 RELYALLHLSPEASDEEIRKAYRQWAQVYHPDKYQAPHMKEIATENFQRICEAYEILSDENKRLIYDIYGMEGLTSG 380
            R+ Y +L +  +ASD+EI+KAYR+ ++ YHPD  +AP     A   F+ + EAYE LSD  KR  YD YG  G+  G
Sbjct:    5 RDYYDVLGVGRDASDDEIKKAYRKLSKKYHPDINKAPD----AEAKFKEVTEAYEALSDPQKRAAYDQYGHAGMNGG 77          
BLAST of DY259871 vs. ExPASy Swiss-Prot
Match: DNAJ_LACSK (Chaperone protein dnaJ OS=Lactobacillus sakei GN=dnaJ PE=2 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 6.203e-11
Identity = 35/77 (45.45%), Postives = 48/77 (62.34%), Query Frame = 3
Query:  150 RELYALLHLSPEASDEEIRKAYRQWAQVYHPDKYQAPHMKEIATENFQRICEAYEILSDENKRLIYDIYGMEGLTSG 380
            R+ Y +L +  +ASD+EI+KAYR+ ++ YHPD  +AP     A   F+ + EAYE LSD  KR  YD YG  G+  G
Sbjct:    5 RDYYDVLGVGRDASDDEIKKAYRKLSKKYHPDINKAPD----AEAKFKEVTEAYEALSDPQKRAAYDQYGHAGMNGG 77          
BLAST of DY259871 vs. ExPASy Swiss-Prot
Match: DNAJ_HELHP (Chaperone protein dnaJ OS=Helicobacter hepaticus GN=dnaJ PE=3 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 6.203e-11
Identity = 36/73 (49.32%), Postives = 50/73 (68.49%), Query Frame = 3
Query:  153 ELYALLHLSPEASDEEIRKAYRQWAQVYHPDKYQAPHMKEIATENFQRICEAYEILSDENKRLIYDIYGMEGL 371
            + Y +L ++  +  E I+KAYR+ A  YHPD+   P  K+ A E F+R+ EAYE+LSD++KR IYD YG EGL
Sbjct:    5 DYYEILEITRTSDKETIKKAYRKMALKYHPDRN--PDDKD-AEEQFKRVNEAYEVLSDDSKRQIYDKYGKEGL 74          
BLAST of DY259871 vs. ExPASy Swiss-Prot
Match: DNAJ_BACCN (Chaperone protein dnaJ OS=Bacillus cereus subsp. cytotoxis (strain NVH 391-98) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 6.203e-11
Identity = 36/77 (46.75%), Postives = 50/77 (64.94%), Query Frame = 3
Query:  150 RELYALLHLSPEASDEEIRKAYRQWAQVYHPDKYQAPHMKEIATENFQRICEAYEILSDENKRLIYDIYGMEGLTSG 380
            R+ Y +L +S  AS +EI+KAYR+ A+ YHPD  +    +E A E F+ + EAYE+LSDE KR  YD +G  G + G
Sbjct:    4 RDYYEVLGVSKSASKDEIKKAYRRLAKKYHPDVSK----EENAVEKFKEVQEAYEVLSDEQKRAQYDQFGHAGSSQG 76          
BLAST of DY259871 vs. ExPASy Swiss-Prot
Match: JEM1_YEAST (DnaJ-like chaperone JEM1 OS=Saccharomyces cerevisiae GN=JEM1 PE=1 SV=3)

HSP 1 Score: 68.5514 bits (166), Expect = 8.101e-11
Identity = 37/91 (40.66%), Postives = 52/91 (57.14%), Query Frame = 3
Query:  144 PNRELYALLHLSPEASDEEIRKAYRQWAQVYHPDKYQAPH--MKEIATENFQRICEAYEILSDENKRLIYDIYGMEGLTSGLELGPKLNKV 410
            P ++ Y +L +SP AS +EIRKAY    + YHPDK +A H   +E   E   +I EAYE LSD++KR  YD+       +    GP+ N +
Sbjct:  535 PKKDYYKILGVSPSASSKEIRKAYLNLTKKYHPDKIKANHNDKQESIHETMSQINEAYETLSDDDKRKEYDLSRSNPRRNTFPQGPRQNNM 625          
BLAST of DY259871 vs. ExPASy Swiss-Prot
Match: DNAJ_NITOC (Chaperone protein dnaJ OS=Nitrosococcus oceani (strain ATCC 19707 / NCIMB 11848) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 8.101e-11
Identity = 36/82 (43.90%), Postives = 50/82 (60.98%), Query Frame = 3
Query:  150 RELYALLHLSPEASDEEIRKAYRQWAQVYHPDKYQAPHMKEIATENFQRICEAYEILSDENKRLIYDIYGMEGLTSGLELGP 395
            R+ Y  L ++  ASD EI+KAYR+ A  YHPD+       + A E+F+ I EAY++LSD  KR  YD +G  G+ +G   GP
Sbjct:    4 RDYYEALGVARNASDAEIKKAYRRLAMRYHPDRNPDD---KAAEEHFKEIQEAYDVLSDARKRTAYDQFGHAGVGAGASAGP 82          
BLAST of DY259871 vs. ExPASy Swiss-Prot
Match: DNAJ_BURM1 (Chaperone protein dnaJ OS=Burkholderia multivorans (strain ATCC 17616 / 249) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 8.101e-11
Identity = 36/74 (48.65%), Postives = 50/74 (67.57%), Query Frame = 3
Query:  150 RELYALLHLSPEASDEEIRKAYRQWAQVYHPDKYQAPHMKEIATENFQRICEAYEILSDENKRLIYDIYGMEGL 371
            R+ Y +L ++  ASD+EI+KAYR+ A  YHPD+   P  K+ A E+F+ + EAYE+LSD  KR  YD YG  G+
Sbjct:    4 RDYYEVLGVAKNASDDEIKKAYRKLAMKYHPDR--NPDNKD-AEEHFKEVKEAYEMLSDSQKRAAYDQYGHAGV 74          
BLAST of DY259871 vs. ExPASy Swiss-Prot
Match: DNAJ_BORPE (Chaperone protein dnaJ OS=Bordetella pertussis GN=dnaJ PE=3 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 8.101e-11
Identity = 36/74 (48.65%), Postives = 48/74 (64.86%), Query Frame = 3
Query:  150 RELYALLHLSPEASDEEIRKAYRQWAQVYHPDKYQAPHMKEIATENFQRICEAYEILSDENKRLIYDIYGMEGL 371
            R+ Y +L ++  ASDE+++KAYR+ A  YHPD+   P  KE A E F+   EAYE+L DE KR  YD YG  G+
Sbjct:    4 RDYYEVLGVAKNASDEDLKKAYRKLAMKYHPDR--NPDSKE-AEEKFKEAKEAYEVLGDEQKRAAYDRYGHAGV 74          
BLAST of DY259871 vs. ExPASy Swiss-Prot
Match: DNAJ_BORPA (Chaperone protein dnaJ OS=Bordetella parapertussis GN=dnaJ PE=3 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 8.101e-11
Identity = 36/74 (48.65%), Postives = 48/74 (64.86%), Query Frame = 3
Query:  150 RELYALLHLSPEASDEEIRKAYRQWAQVYHPDKYQAPHMKEIATENFQRICEAYEILSDENKRLIYDIYGMEGL 371
            R+ Y +L ++  ASDE+++KAYR+ A  YHPD+   P  KE A E F+   EAYE+L DE KR  YD YG  G+
Sbjct:    4 RDYYEVLGVAKNASDEDLKKAYRKLAMKYHPDR--NPDSKE-AEEKFKEAKEAYEVLGDEQKRAAYDRYGHAGV 74          
BLAST of DY259871 vs. ExPASy Swiss-Prot
Match: DNAJ_BORBR (Chaperone protein dnaJ OS=Bordetella bronchiseptica GN=dnaJ PE=3 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 8.101e-11
Identity = 36/74 (48.65%), Postives = 48/74 (64.86%), Query Frame = 3
Query:  150 RELYALLHLSPEASDEEIRKAYRQWAQVYHPDKYQAPHMKEIATENFQRICEAYEILSDENKRLIYDIYGMEGL 371
            R+ Y +L ++  ASDE+++KAYR+ A  YHPD+   P  KE A E F+   EAYE+L DE KR  YD YG  G+
Sbjct:    4 RDYYEVLGVAKNASDEDLKKAYRKLAMKYHPDR--NPDSKE-AEEKFKEAKEAYEVLGDEQKRAAYDRYGHAGV 74          
The following BLAST results are available for this feature:
BLAST of DY259871 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 70
Match NameE-valueIdentityDescription
DNAJ_LACSS6.203e-1145.45Chaperone protein dnaJ OS=Lactobacillus sakei subs... [more]
DNAJ_LACSK6.203e-1145.45Chaperone protein dnaJ OS=Lactobacillus sakei GN=d... [more]
DNAJ_HELHP6.203e-1149.32Chaperone protein dnaJ OS=Helicobacter hepaticus G... [more]
DNAJ_BACCN6.203e-1146.75Chaperone protein dnaJ OS=Bacillus cereus subsp. c... [more]
JEM1_YEAST8.101e-1140.66DnaJ-like chaperone JEM1 OS=Saccharomyces cerevisi... [more]
DNAJ_NITOC8.101e-1143.90Chaperone protein dnaJ OS=Nitrosococcus oceani (st... [more]
DNAJ_BURM18.101e-1148.65Chaperone protein dnaJ OS=Burkholderia multivorans... [more]
DNAJ_BORPE8.101e-1148.65Chaperone protein dnaJ OS=Bordetella pertussis GN=... [more]
DNAJ_BORPA8.101e-1148.65Chaperone protein dnaJ OS=Bordetella parapertussis... [more]
DNAJ_BORBR8.101e-1148.65Chaperone protein dnaJ OS=Bordetella bronchiseptic... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAP10YH12FM1 Fruit-TF Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY259871 ID=DY259871; Name=DY259871; organism=Citrus clementina; type=EST; length=1150bp
GGAGTAATGCATCTCTCTCTTCTAACATGTTGGATGTCGAAGAACGAACT
GAGTTCACTTTTTCTTTGAGATTCTGAGGACCCAAGAGAGAAAAAAAAAA
AAGAAGAAAAAAGTCAAAGATGAGGGAAGCAAAGGACGGGCCGCCAAACA
GGGAATTGTATGCACTGTTGCATCTTTCGCCGGAAGCCTCCGATGAAGAA
ATCAGAAAAGCTTATCGCCAGTGGGCCCAAGTCTATCACCCTGATAAATA
TCAAGCTCCTCATATGAAGGAAATTGCTACAGAGAACTTTCAGAGGATAT
GTGAAGCGTACGAAATATTATCAGATGAGAATAAGCGGCTGATATATGAT
ATATATGGTATGGAAGGATTGACTTCTGGGTTGGAACTTGGTCCAAAGCT
AAATAAAGTGGAAGAGTTAAAGGAAGAGCTTGAAAGGCTACGGCAGAGGA
AGGAACAAGAGAAGGCTTTAGCACATTTTCGTCCTTCTGGGACGATACTG
GCCAGCTTCTCTTTGCCACAGTTTCTAGAGGGTGATGGCATAATGAGAGG
GATGGCTATGAGTAGTGAAGTTCAGTCTCAACTATCTAAAAACAGTATTC
TTGCTTTTGGTGGAAATTTGGAAGTAAATGATGATTCTGGTGGTGGAGCT
GCTTCAGTTGTGCTTAGGCATCAGTTGTCCTCTGTCTCATCTATAGAATT
TATAGCTTCAGCTGGTTTACGGGCACTGGTTGGAATACAAACCACCCGGT
AGCTCATTTGTTTTGATGTGTCCTTTTGACTATTTGGCCTATAAACTTTG
TTCCCTTTTATTTTCTCATTTTATAGTCCCCCTACCATCACATTCCACCG
GCAAAAATGGCCGTTGGCCATGTCTTTGAAAAATGGCCCCCTTAATCCTT
TCCAAAAACCGGGACCCCGCCAGATCCCCCGAACCAACGAAAGGGGAAAA
AACCGCCCCTTGGTGGGGTAAAAAGCCTACCATTTCCGGTTGGGGGGGCA
AAAAAAAAAAAGAAAAAAAGGTCTCGCCGGGGGGGGAAGACCTTTAAAAA
TGGGGCCCAAATTTTCTTTTTGGGGGCCATCCCCCCTCCTTTTATATCCC
CCCGGGGTTTTTCCCAAAAAAACCCCCGGGGGGGCCGAAATACAGGGGGG
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