DY259874

Overview
NameDY259874
Unique NameDY259874
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length901
Libraries
Library NameType
Fruit-TFcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig15114 contig Ccv1_Contig15114:71..970. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of DY259874 vs. ExPASy Swiss-Prot
Match: THI4_SULIY (Putative thiazole biosynthetic enzyme OS=Sulfolobus islandicus (strain Y.G.57.14 / Yellowstone #1) GN=YG5714_1786 PE=3 SV=1)

HSP 1 Score: 80.4925 bits (197), Expect = 1.460e-14
Identity = 52/180 (28.89%), Postives = 87/180 (48.33%), Query Frame = 2
Query:  212 KFDPIKESIVSREMTRRYMTDMITYADTDXXXXGAGSAGLSCAYELSKNPNIQIAIIEQSVSPGGGAWLGGQLFSAMVVRKPAHIFLDELGIDYDEQDNYVVIKHAALFTSTIMSKLLARPNVKLFNAVAAEDLIVKGG--RVGGVVTNWALVSMNHDTQSLLDPNVMEAKVVVSSCGHE 745
            K   + E  +SR + +  M D   + ++D    GAG +GLS AY L+K   ++  + E+ +S GGG   G  LF  +++ KPA   L E+ +   E +  V +  +A F + + +  +     K+ + V  +D+I +    RV GV   W    M       +DP  + AK VV + GH+
Sbjct:    4 KIKQVDEVKISRYIIKETMEDWYQFVESDVVIVGAGPSGLSAAYYLAK-AGLKTLVFERRLSFGGGIGGGAMLFHKLIIEKPADEILREVNVRLKEVEEGVYVVDSAEFMAKLATAAI-DAGAKIIHGVTVDDVIFRENPLRVAGVAVEWTATQM---ASLHVDPIFISAKAVVDATGHD 178          
BLAST of DY259874 vs. ExPASy Swiss-Prot
Match: THI4_SULIN (Putative thiazole biosynthetic enzyme OS=Sulfolobus islandicus (strain Y.N.15.51 / Yellowstone #2) GN=YN1551_1140 PE=3 SV=1)

HSP 1 Score: 80.4925 bits (197), Expect = 1.460e-14
Identity = 52/180 (28.89%), Postives = 87/180 (48.33%), Query Frame = 2
Query:  212 KFDPIKESIVSREMTRRYMTDMITYADTDXXXXGAGSAGLSCAYELSKNPNIQIAIIEQSVSPGGGAWLGGQLFSAMVVRKPAHIFLDELGIDYDEQDNYVVIKHAALFTSTIMSKLLARPNVKLFNAVAAEDLIVKGG--RVGGVVTNWALVSMNHDTQSLLDPNVMEAKVVVSSCGHE 745
            K   + E  +SR + +  M D   + ++D    GAG +GLS AY L+K   ++  + E+ +S GGG   G  LF  +++ KPA   L E+ +   E +  V +  +A F + + +  +     K+ + V  +D+I +    RV GV   W    M       +DP  + AK VV + GH+
Sbjct:    4 KIKQVDEVKISRYIIKETMEDWYQFVESDVVIVGAGPSGLSAAYYLAK-AGLKTLVFERRLSFGGGIGGGAMLFHKLIIEKPADEILREVNVRLKEVEEGVYVVDSAEFMAKLATAAI-DAGAKIIHGVTVDDVIFRENPLRVAGVAVEWTATQM---ASLHVDPIFISAKAVVDATGHD 178          
BLAST of DY259874 vs. ExPASy Swiss-Prot
Match: THI4_SULIL (Putative thiazole biosynthetic enzyme OS=Sulfolobus islandicus (strain L.S.2.15 / Lassen #1) GN=LS215_1798 PE=3 SV=1)

HSP 1 Score: 80.4925 bits (197), Expect = 1.460e-14
Identity = 52/180 (28.89%), Postives = 87/180 (48.33%), Query Frame = 2
Query:  212 KFDPIKESIVSREMTRRYMTDMITYADTDXXXXGAGSAGLSCAYELSKNPNIQIAIIEQSVSPGGGAWLGGQLFSAMVVRKPAHIFLDELGIDYDEQDNYVVIKHAALFTSTIMSKLLARPNVKLFNAVAAEDLIVKGG--RVGGVVTNWALVSMNHDTQSLLDPNVMEAKVVVSSCGHE 745
            K   + E  +SR + +  M D   + ++D    GAG +GLS AY L+K   ++  + E+ +S GGG   G  LF  +++ KPA   L E+ +   E +  V +  +A F + + +  +     K+ + V  +D+I +    RV GV   W    M       +DP  + AK VV + GH+
Sbjct:    4 KIKQVDEVKISRYIIKETMEDWYQFVESDVVIVGAGPSGLSAAYYLAK-AGLKTLVFERRLSFGGGIGGGAMLFHKLIIEKPADEILREVNVRLKEVEEGVYVVDSAEFMAKLATAAI-DAGAKIIHGVTVDDVIFRENPLRVAGVAVEWTATQM---ASLHVDPIFISAKAVVDATGHD 178          
BLAST of DY259874 vs. ExPASy Swiss-Prot
Match: THI4_SULIK (Putative thiazole biosynthetic enzyme OS=Sulfolobus islandicus (strain M.16.4 / Kamchatka #3) GN=M164_1717 PE=3 SV=1)

HSP 1 Score: 80.4925 bits (197), Expect = 1.460e-14
Identity = 52/180 (28.89%), Postives = 87/180 (48.33%), Query Frame = 2
Query:  212 KFDPIKESIVSREMTRRYMTDMITYADTDXXXXGAGSAGLSCAYELSKNPNIQIAIIEQSVSPGGGAWLGGQLFSAMVVRKPAHIFLDELGIDYDEQDNYVVIKHAALFTSTIMSKLLARPNVKLFNAVAAEDLIVKGG--RVGGVVTNWALVSMNHDTQSLLDPNVMEAKVVVSSCGHE 745
            K   + E  +SR + +  M D   + ++D    GAG +GLS AY L+K   ++  + E+ +S GGG   G  LF  +++ KPA   L E+ +   E +  V +  +A F + + +  +     K+ + V  +D+I +    RV GV   W    M       +DP  + AK VV + GH+
Sbjct:    4 KIKQVDEVKISRYIIKETMEDWYQFVESDVVIVGAGPSGLSAAYYLAK-AGLKTLVFERRLSFGGGIGGGAMLFHKLIIEKPADEILREVNVRLKEVEEGVYVVDSAEFMAKLATAAI-DAGAKIIHGVTVDDVIFRENPLRVAGVAVEWTATQM---ASLHVDPIFISAKAVVDATGHD 178          
BLAST of DY259874 vs. ExPASy Swiss-Prot
Match: THI4_SULIA (Putative thiazole biosynthetic enzyme OS=Sulfolobus islandicus (strain M.16.27) GN=M1627_1786 PE=3 SV=1)

HSP 1 Score: 80.4925 bits (197), Expect = 1.460e-14
Identity = 52/180 (28.89%), Postives = 87/180 (48.33%), Query Frame = 2
Query:  212 KFDPIKESIVSREMTRRYMTDMITYADTDXXXXGAGSAGLSCAYELSKNPNIQIAIIEQSVSPGGGAWLGGQLFSAMVVRKPAHIFLDELGIDYDEQDNYVVIKHAALFTSTIMSKLLARPNVKLFNAVAAEDLIVKGG--RVGGVVTNWALVSMNHDTQSLLDPNVMEAKVVVSSCGHE 745
            K   + E  +SR + +  M D   + ++D    GAG +GLS AY L+K   ++  + E+ +S GGG   G  LF  +++ KPA   L E+ +   E +  V +  +A F + + +  +     K+ + V  +D+I +    RV GV   W    M       +DP  + AK VV + GH+
Sbjct:    4 KIKQVDEVKISRYIIKETMEDWYQFVESDVVIVGAGPSGLSAAYYLAK-AGLKTLVFERRLSFGGGIGGGAMLFHKLIIEKPADEILREVNVRLKEVEEGVYVVDSAEFMAKLATAAI-DAGAKIIHGVTVDDVIFRENPLRVAGVAVEWTATQM---ASLHVDPIFISAKAVVDATGHD 178          
BLAST of DY259874 vs. ExPASy Swiss-Prot
Match: THI4_METVS (Putative thiazole biosynthetic enzyme OS=Methanococcus vannielii (strain SB / ATCC 35089 / DSM 1224) GN=Mevan_0663 PE=3 SV=1)

HSP 1 Score: 64.3142 bits (155), Expect = 1.930e-13
Identity = 52/185 (28.11%), Postives = 85/185 (45.95%), Query Frame = 2
Query:  230 ESIVSREMTRRYMTDMITYADTDXXXXGAGSAGLSCAYELSKNPNIQIAIIEQSVSPGGGAWLGGQLFSAMVVRKPAHIFLDELGIDYDEQDNYVVIKHAALFTS---TIMSKL---LARPNVKLFNAVAAEDLIVKGGRVGGVVTNWALVSMNHDTQSL-LDPNVMEAKVVVSSCGHEGPFGAT 763
            E  V++ + +      +   + D    G G +GL+ A  L++   ++  ++E+ +S GGG W GG  F  +VV KPA   L   GI     D         LFT+    + +KL         K+   +  EDLI+K  ++ GVV    + S + +   L +DP  + AK V+ S GH+    +T
Sbjct:    9 EVAVTKSIIKSSFEMWMDLIEVDVVIVGGGPSGLTAAKYLAEK-GVKTLVLERHLSFGGGTWGGGMGFPNIVVEKPADEILRSAGIKLKSVDG-----EPELFTADSVEVPAKLGVAAIDAGAKILTGIVVEDLILKEDKISGVV----IQSYSIEKAGLHVDPITISAKYVIDSTGHDASVVST 183          

HSP 2 Score: 32.7278 bits (73), Expect = 1.930e-13
Identity = 15/34 (44.12%), Postives = 23/34 (67.65%), Query Frame = 1
Query:  778 KNIEMIEEVPGMKALEMNFGKNAIVRPTREVGPG 879
            KN ++  EVPG K++    G+N++ R TRE+ PG
Sbjct:  187 KNKDLGIEVPGEKSMWAEKGENSLTRNTREIFPG 220          
BLAST of DY259874 vs. ExPASy Swiss-Prot
Match: THI4_META3 (Putative thiazole biosynthetic enzyme OS=Methanococcus aeolicus (strain Nankai-3 / ATCC BAA-1280) GN=Maeo_0798 PE=3 SV=1)

HSP 1 Score: 67.0106 bits (162), Expect = 1.203e-12
Identity = 42/158 (26.58%), Postives = 78/158 (49.37%), Query Frame = 2
Query:  290 DTDXXXXGAGSAGLSCAYELSKNPNIQIAIIEQSVSPGGGAWLGGQLFSAMVVRKPAHIFLDELGIDYDEQDNYVVIKHAALFTSTIMSKLLARPNVKLFNAVAAEDLIVKGGRVGGVVTNWALVSMNHDTQSLLDPNVMEAKVVVSSCGHEGPFGAT 763
            + D    G G +GL+    L+ +  +++ I+E+ +S GGG W GG     + V+ PA   L E+GI  +E ++ + +  +    + + +  +     K+   +  ED+I+K G+V GVV N   +   +     +DP  + AK V+ + GH+     T
Sbjct:   32 EVDVVIVGGGPSGLTAGRYLA-DAGVKVLILERHLSFGGGTWGGGMGCPYITVQSPADEILSEVGIKLEEGEDGLFVADSVEVPAKLGTGAI-DAGAKVLTGIVVEDVILKEGKVSGVVINSYAI---NKAGLHIDPLTINAKYVIDATGHDASVACT 184          

HSP 2 Score: 27.335 bits (59), Expect = 1.203e-12
Identity = 12/34 (35.29%), Postives = 23/34 (67.65%), Query Frame = 1
Query:  778 KNIEMIEEVPGMKALEMNFGKNAIVRPTREVGPG 879
            KN ++   +PG K+L  + G+N +++ T+E+ PG
Sbjct:  188 KNEDLGLVIPGEKSLWADEGENGLLKYTKELFPG 221          
BLAST of DY259874 vs. ExPASy Swiss-Prot
Match: THI4_SULTO (Putative thiazole biosynthetic enzyme OS=Sulfolobus tokodaii GN=ST0361 PE=3 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 3.975e-12
Identity = 50/185 (27.03%), Postives = 88/185 (47.57%), Query Frame = 2
Query:  197 DLNTFKFDPIKESIVSREMTRRYMTDMITYADTDXXXXGAGSAGLSCAYELSKNPNIQIAIIEQSVSPGGGAWLGGQLFSAMVVRKPAHIFLDELGIDYDEQDNYVVIKHAALFTSTIMSKLLARPNVKLFNAVAAEDLIVKGG--RVGGVVTNWALVSMNHDTQSLLDPNVMEAKVVVSSCGHE 745
            D N+ K   + E  +S+ + +    D     ++D    GAG +G++ AY L+K   ++  + E+ +S GGG   G  LF  +V+  PA   L E+ I  ++ +  V I  +A F + + +  +     K+ + V  +D+I +    +V GV   W    M       +DP  + AK VV + GH+
Sbjct:    2 DSNSIKVKQVDEVKISKYILKYTFQDWEDIVESDVVIVGAGPSGMTAAYYLAK-AGLKTVVFERRLSFGGGIGGGAMLFHKIVIESPADEILKEMKIKLNKVEEGVYIVDSAEFMAKLAASAIDA-GAKIIHGVTVDDVIFRENPLKVVGVAVEWTATQM---AGLHVDPLFISAKAVVDATGHD 181          
BLAST of DY259874 vs. ExPASy Swiss-Prot
Match: THI4_METS5 (Putative thiazole biosynthetic enzyme OS=Metallosphaera sedula (strain ATCC 51363 / DSM 5348) GN=Msed_2221 PE=3 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 1.511e-11
Identity = 53/187 (28.34%), Postives = 89/187 (47.59%), Query Frame = 2
Query:  200 LNTFKFDPIKESIVSREMTRRYMTDMITYADTDXXXXGAGSAGLSCAYELSKNPNIQIAIIEQSVSPGGGAWLGGQLFSAMVVRKPAHIFLDELGIDYDEQDNYVVIKHAALFTSTIMSKLLAR---PNVKLFNAVAAEDLIVKGG--RVGGVVTNWALVSMNHDTQSLLDPNVMEAKVVVSSCGHE 745
            +N  + D IK   ++R + +    D + ++  D    GAG +GL+ AY  +K   ++  + E+ +S GGG   G  LF  +V+  PA   L E+G+   + +  V +    + +S  M+KL A       K+ + V  +D+I +    RV GV   W    M       +DP  + AK VV + GH+
Sbjct:    1 MNIKQVDEIK---ITRYILKATFEDWMDFSVNDVVIVGAGPSGLAAAYYSAK-AGLKTTVFERRLSFGGGIGGGAMLFHKIVIESPADEILREIGVKLQKFEEGVYV----VDSSEFMAKLAAATIDAGAKIIHGVTVDDVIFRENPLRVTGVAVEWTATQM---ASLHVDPLFISAKAVVDATGHD 176          
BLAST of DY259874 vs. ExPASy Swiss-Prot
Match: THI4_DESMR (Putative thiazole biosynthetic enzyme OS=Desulfovibrio magneticus (strain ATCC 700980 / DSM 13731 / RS-1) GN=DMR_31420 PE=3 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 2.577e-11
Identity = 49/178 (27.53%), Postives = 90/178 (50.56%), Query Frame = 2
Query:  224 IKESIVSREMTRRYMTDMITYADTDXXXXGAGSAGLSCAYELSKNPNIQIAIIEQSVSPGGGAWLGGQLFSAMVVRKPAHIFLDELGIDYDE-QDNYVVIKHAALFTSTIMSKLLARPNVKLFNAVAAEDLIVKG----GRVGGVVTNWALVSMNHDTQSLLDPNVMEAKVVVSSCGH 742
            + E I+++ +   Y     +  D D    G G +G++ A  L+ +    +A+ E+ +S GGG W GG  F+ +VV++ +   L ++G+     +DNY      A  T+   +  LA    K+FN ++ ED++++      RV G+V N + V +       +DP V+ +K +V + GH
Sbjct:    3 LDERIITQAILETYFEKFKSSLDLDVAIVGGGPSGMTAARLLAAD-GFNVALFERKLSLGGGMWGGGMTFNMIVVQEESVHLLTDVGVPVKRYKDNYFTADAVAATTTLASAACLA--GAKIFNCMSVEDVMLREENGVKRVTGIVINSSPVEI---AGLHVDPVVLGSKYLVEATGH 174          
The following BLAST results are available for this feature:
BLAST of DY259874 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 50
Match NameE-valueIdentityDescription
THI4_SULIY1.460e-1428.89Putative thiazole biosynthetic enzyme OS=Sulfolobu... [more]
THI4_SULIN1.460e-1428.89Putative thiazole biosynthetic enzyme OS=Sulfolobu... [more]
THI4_SULIL1.460e-1428.89Putative thiazole biosynthetic enzyme OS=Sulfolobu... [more]
THI4_SULIK1.460e-1428.89Putative thiazole biosynthetic enzyme OS=Sulfolobu... [more]
THI4_SULIA1.460e-1428.89Putative thiazole biosynthetic enzyme OS=Sulfolobu... [more]
THI4_METVS1.930e-1328.11Putative thiazole biosynthetic enzyme OS=Methanoco... [more]
THI4_META31.203e-1226.58Putative thiazole biosynthetic enzyme OS=Methanoco... [more]
THI4_SULTO3.975e-1227.03Putative thiazole biosynthetic enzyme OS=Sulfolobu... [more]
THI4_METS51.511e-1128.34Putative thiazole biosynthetic enzyme OS=Metallosp... [more]
THI4_DESMR2.577e-1127.53Putative thiazole biosynthetic enzyme OS=Desulfovi... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAP10YH15FM1 Fruit-TF Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY259874 ID=DY259874; Name=DY259874; organism=Citrus clementina; type=EST; length=901bp
GGAGGGGTTAAAAAAAAAAAACATGGCAGCCATGACTTCTACAGCTTTCG
CTCCTTCAGTTTCGTCCACCACCAATAAGCTCTTTGACTCATCCTTTCAT
GGGGCTCCCATGTCACCTTCTCTTCTACGTCTTCAACCCATCAAATCTTC
TCGTCCCAACAACTTGTCCATTTCTGCTTCTGCTTCTCCTCCTTATGACT
TGAACACTTTCAAGTTTGACCCCATCAAAGAATCCATTGTTTCTCGTGAA
ATGACACGCAGGTACATGACGGACATGATCACTTATGCTGACACTGATGT
GGTAGTGGTTGGTGCTGGCTCTGCTGGCCTCTCTTGTGCTTATGAGCTCA
GCAAAAACCCCAACATTCAGATTGCTATTATCGAACAGTCTGTTAGCCCC
GGCGGTGGCGCGTGGCTCGGTGGACAGCTCTTCTCTGCCATGGTTGTGCG
CAAACCAGCCCACATCTTCCTTGACGAGCTTGGCATCGACTACGATGAGC
AAGACAACTATGTTGTGATCAAGCATGCAGCGCTGTTCACCTCCACTATA
ATGAGCAAGCTCCTGGCCCGCCCCAACGTCAAGCTCTTTAATGCAGTGGC
AGCCGAGGACTTGATAGTCAAAGGCGGCAGAGTTGGTGGTGTGGTGACCA
ACTGGGCGTTGGTGTCAATGAATCACGATACACAGTCTTTGCTGGATCCC
AATGTAATGGAAGCGAAGGTGGTTGTGAGCTCCTGTGGCCATGAGGGGCC
TTTTGGTGCCACTGAATAAAAAAGGTGAAGAATATCGAAATGATTGAGGA
AGTGCCTGGAATGAAGGCACTGGAAATGAACTTCGGCAAAAATGCTATTG
TAAGGCCAACCAGGGAGGTTGGCCCGGGAGAAAGTATACCGCATGGAATT
T
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