DY259877

Overview
NameDY259877
Unique NameDY259877
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length981
Libraries
Library NameType
Fruit-TFcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY259877 vs. ExPASy Swiss-Prot
Match: DRKD_DICDI (Probable serine/threonine-protein kinase drkD OS=Dictyostelium discoideum GN=drkD PE=2 SV=1)

HSP 1 Score: 83.9593 bits (206), Expect = 1.461e-18
Identity = 50/169 (29.59%), Postives = 94/169 (55.62%), Query Frame = 2
Query:  248 QETEQLRNVLAKEIPKVENHHHVVYPVGEQEQSGINHVNIPAEGIDV-----WEIDASLLKFEHKIVSGSYCDLYKGAFFSQDVAIKVLTNEHLNENIRREFAQEVHIMRKVRHMNVVQFIGACTRPPRLFIVTEFMSGGSIYDYLHKQKCRLNLPLPTQVANDVSKGM 739
            Q+ +Q +   + + P V N+++      +  Q  +    IPA+ I+V     WE+  S +    +I  G Y  +++G++   +VA+K+L N+++N  +  +  +EV ++ K+RH N+V F+GACT P    IVTE++S GS+ + L  +   ++  L  Q+  D ++GM
Sbjct:  794 QQQQQQQQNGSPQQPHVNNNNNNNIQQNKDHQFPVP--TIPAKIIEVEKPFEWEVPLSEIAIGARIGRGGYGQVFRGSWRGTEVAVKMLFNDNVNLKLISDLRKEVDLLCKLRHPNIVLFMGACTEPSSPCIVTEYLSRGSLANILLDESIEMDWGLRLQLGFDCARGM 960          

HSP 2 Score: 30.4166 bits (67), Expect = 1.461e-18
Identity = 14/30 (46.67%), Postives = 20/30 (66.67%), Query Frame = 1
Query:  724 CFQGNDYLHKNNKI--HRDLEAANLLMNEN 807
            C +G  YLH  N I  HRDL+  NLL++++
Sbjct:  956 CARGMTYLHSRNPIIIHRDLKTDNLLVDDS 985          
BLAST of DY259877 vs. ExPASy Swiss-Prot
Match: HT1_ARATH (Serine/threonine-protein kinase HT1 OS=Arabidopsis thaliana GN=HT1 PE=1 SV=1)

HSP 1 Score: 78.9518 bits (193), Expect = 5.564e-18
Identity = 41/122 (33.61%), Postives = 73/122 (59.84%), Query Frame = 2
Query:  389 WEIDASLLKFEHKIVSGSYCDLYKGAFFSQDVAIKVLT----NEHLNENIRREFAQEVHIMRKVRHMNVVQFIGACTRPPRLFIVTEFMSGGSIYDYLHKQK-CRLNLPLPTQVANDVSKGM 739
            W  D S L   +K  SG++  +Y+G +  + VA+K++      E     + ++F  EV ++ ++ H N+VQFI AC +PP   I+TE+MS G++  YL+K++   L++    ++A D+S+GM
Sbjct:   79 WTADLSQLFIGNKFASGAHSRIYRGIYKQRAVAVKMVRIPTHKEETRAKLEQQFKSEVALLSRLFHPNIVQFIAACKKPPVYCIITEYMSQGNLRMYLNKKEPYSLSIETVLRLALDISRGM 200          

HSP 2 Score: 33.4982 bits (75), Expect = 5.564e-18
Identity = 13/25 (52.00%), Postives = 19/25 (76.00%), Query Frame = 1
Query:  730 QGNDYLHKNNKIHRDLEAANLLMNE 804
            +G +YLH    IHRDL++ NLL+N+
Sbjct:  198 RGMEYLHSQGVIHRDLKSNNLLLND 222          
BLAST of DY259877 vs. ExPASy Swiss-Prot
Match: SHKC_DICDI (Dual specificity protein kinase shkC OS=Dictyostelium discoideum GN=shkC PE=3 SV=1)

HSP 1 Score: 81.2629 bits (199), Expect = 1.216e-17
Identity = 44/116 (37.93%), Postives = 67/116 (57.76%), Query Frame = 2
Query:  392 EIDASLLKFEHKIVSGSYCDLYKGAFFSQDVAIKVLTNEHLNENIRREFAQEVHIMRKVRHMNVVQFIGACTRPPRLFIVTEFMSGGSIYDYLHKQKCRLNLPLPTQVANDVSKGM 739
            EI    + FE  I +GS+  +YKG    + VA+K+L  ++ +      F +EVH+M K+ H N+  F+GACT P R  IVTE +  G++   LH QK +L L L  ++A D + G+
Sbjct:   18 EIRPEEINFEELIGTGSFGKVYKGRCRQKAVAVKLLHKQNFDAATLSAFRKEVHLMSKIYHPNICLFMGACTIPGRCVIVTELVPKGNLETLLHDQKIQLPLYLRMRMARDAALGI 133          

HSP 2 Score: 30.0314 bits (66), Expect = 1.216e-17
Identity = 12/27 (44.44%), Postives = 23/27 (85.19%), Query Frame = 1
Query:  733 GNDYLHKNNKI--HRDLEAANLLMNEN 807
            G ++LH++N +  HRD++++NLL++EN
Sbjct:  132 GINWLHESNPVFVHRDIKSSNLLVDEN 158          
BLAST of DY259877 vs. ExPASy Swiss-Prot
Match: SHKB_DICDI (Dual specificity protein kinase shkB OS=Dictyostelium discoideum GN=shkB PE=3 SV=1)

HSP 1 Score: 78.5666 bits (192), Expect = 4.489e-17
Identity = 44/109 (40.37%), Postives = 65/109 (59.63%), Query Frame = 2
Query:  362 NIPAEGIDVWEIDASLLKF--EHKIVSGSYCDLYKGAFFSQDVAIKVLTNEHLNENIRREFAQEVHIMRKVRHMNVVQFIGACTRPPRLFIVTEFMSGGSIYDYLHKQK 682
            N   E I  WEID + + +  E K+ SG++  +YKG    ++VAIK LT     EN   EF +EV +M K+R+ +++ F+GACT P  L IVTE M  GS++  L  ++
Sbjct:  156 NRDEEEIIRWEIDRNEISYNREAKLGSGAFGSVYKGIVRGKEVAIKKLTQTVFEENTMNEFKKEVSLMAKLRNPHLLLFMGACTAPEDLSIVTELMPKGSVHSLLRAKE 264          

HSP 2 Score: 30.8018 bits (68), Expect = 4.489e-17
Identity = 16/41 (39.02%), Postives = 24/41 (58.54%), Query Frame = 1
Query:  733 GNDYLHKNNKIHRDLEAANLLMNEN--------GLRKFQIP 831
            G  +LH +N +H DL+ ANLL+++N        GL K+  P
Sbjct:  285 GMTWLHASNILHLDLKPANLLVDQNWVVKVADFGLSKYMKP 325          
BLAST of DY259877 vs. ExPASy Swiss-Prot
Match: RAF1_RAT (RAF proto-oncogene serine/threonine-protein kinase OS=Rattus norvegicus GN=Raf1 PE=1 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 1.282e-16
Identity = 41/117 (35.04%), Postives = 67/117 (57.26%), Query Frame = 2
Query:  389 WEIDASLLKFEHKIVSGSYCDLYKGAFFSQDVAIKVLTNEHLNENIRREFAQEVHIMRKVRHMNVVQFIGACTRPPRLFIVTEFMSGGSIYDYLHKQKCRLNLPLPTQVANDVSKGM 739
            WEI+AS +    +I SGS+  +YKG +   DVA+K+L          + F  EV ++RK RH+N++ F+G  T+   L IVT++  G S+Y +LH Q+ +  +     +A   ++GM
Sbjct:  342 WEIEASEVMLSTRIGSGSFGTVYKGKWHG-DVAVKILKVVDPTPEQLQAFRNEVAVLRKTRHVNILLFMGYMTK-DNLAIVTQWCEGSSLYKHLHVQETKFQMFQLIDIARQTAQGM 456          

HSP 2 Score: 34.2686 bits (77), Expect = 1.282e-16
Identity = 13/25 (52.00%), Postives = 19/25 (76.00%), Query Frame = 1
Query:  730 QGNDYLHKNNKIHRDLEAANLLMNE 804
            QG DYLH  N IHRD+++ N+ ++E
Sbjct:  454 QGMDYLHAKNIIHRDMKSNNIFLHE 478          
BLAST of DY259877 vs. ExPASy Swiss-Prot
Match: RAF1_MOUSE (RAF proto-oncogene serine/threonine-protein kinase OS=Mus musculus GN=Raf1 PE=1 SV=2)

HSP 1 Score: 73.559 bits (179), Expect = 1.282e-16
Identity = 41/117 (35.04%), Postives = 67/117 (57.26%), Query Frame = 2
Query:  389 WEIDASLLKFEHKIVSGSYCDLYKGAFFSQDVAIKVLTNEHLNENIRREFAQEVHIMRKVRHMNVVQFIGACTRPPRLFIVTEFMSGGSIYDYLHKQKCRLNLPLPTQVANDVSKGM 739
            WEI+AS +    +I SGS+  +YKG +   DVA+K+L          + F  EV ++RK RH+N++ F+G  T+   L IVT++  G S+Y +LH Q+ +  +     +A   ++GM
Sbjct:  342 WEIEASEVMLSTRIGSGSFGTVYKGKWHG-DVAVKILKVVDPTPEQLQAFRNEVAVLRKTRHVNILLFMGYMTK-DNLAIVTQWCEGSSLYKHLHVQETKFQMFQLIDIARQTAQGM 456          

HSP 2 Score: 34.2686 bits (77), Expect = 1.282e-16
Identity = 13/25 (52.00%), Postives = 19/25 (76.00%), Query Frame = 1
Query:  730 QGNDYLHKNNKIHRDLEAANLLMNE 804
            QG DYLH  N IHRD+++ N+ ++E
Sbjct:  454 QGMDYLHAKNIIHRDMKSNNIFLHE 478          
BLAST of DY259877 vs. ExPASy Swiss-Prot
Match: RAF1_PONAB (RAF proto-oncogene serine/threonine-protein kinase OS=Pongo abelii GN=RAF1 PE=2 SV=1)

HSP 1 Score: 73.1738 bits (178), Expect = 1.666e-16
Identity = 41/117 (35.04%), Postives = 67/117 (57.26%), Query Frame = 2
Query:  389 WEIDASLLKFEHKIVSGSYCDLYKGAFFSQDVAIKVLTNEHLNENIRREFAQEVHIMRKVRHMNVVQFIGACTRPPRLFIVTEFMSGGSIYDYLHKQKCRLNLPLPTQVANDVSKGM 739
            WEI+AS +    +I SGS+  +YKG +   DVA+K+L          + F  EV ++RK RH+N++ F+G  T+   L IVT++  G S+Y +LH Q+ +  +     +A   ++GM
Sbjct:  342 WEIEASEVMLSTRIGSGSFGTVYKGKWHG-DVAVKILKVVDPTPEQFQAFRNEVAVLRKTRHVNILLFMGYMTK-DNLAIVTQWCEGSSLYKHLHVQETKFQMFQLIDIARQTAQGM 456          

HSP 2 Score: 34.2686 bits (77), Expect = 1.666e-16
Identity = 13/25 (52.00%), Postives = 19/25 (76.00%), Query Frame = 1
Query:  730 QGNDYLHKNNKIHRDLEAANLLMNE 804
            QG DYLH  N IHRD+++ N+ ++E
Sbjct:  454 QGMDYLHAKNIIHRDMKSNNIFLHE 478          
BLAST of DY259877 vs. ExPASy Swiss-Prot
Match: RAF1_HUMAN (RAF proto-oncogene serine/threonine-protein kinase OS=Homo sapiens GN=RAF1 PE=1 SV=1)

HSP 1 Score: 73.1738 bits (178), Expect = 1.666e-16
Identity = 41/117 (35.04%), Postives = 67/117 (57.26%), Query Frame = 2
Query:  389 WEIDASLLKFEHKIVSGSYCDLYKGAFFSQDVAIKVLTNEHLNENIRREFAQEVHIMRKVRHMNVVQFIGACTRPPRLFIVTEFMSGGSIYDYLHKQKCRLNLPLPTQVANDVSKGM 739
            WEI+AS +    +I SGS+  +YKG +   DVA+K+L          + F  EV ++RK RH+N++ F+G  T+   L IVT++  G S+Y +LH Q+ +  +     +A   ++GM
Sbjct:  342 WEIEASEVMLSTRIGSGSFGTVYKGKWHG-DVAVKILKVVDPTPEQFQAFRNEVAVLRKTRHVNILLFMGYMTK-DNLAIVTQWCEGSSLYKHLHVQETKFQMFQLIDIARQTAQGM 456          

HSP 2 Score: 34.2686 bits (77), Expect = 1.666e-16
Identity = 13/25 (52.00%), Postives = 19/25 (76.00%), Query Frame = 1
Query:  730 QGNDYLHKNNKIHRDLEAANLLMNE 804
            QG DYLH  N IHRD+++ N+ ++E
Sbjct:  454 QGMDYLHAKNIIHRDMKSNNIFLHE 478          
BLAST of DY259877 vs. ExPASy Swiss-Prot
Match: RAF1_BOVIN (RAF proto-oncogene serine/threonine-protein kinase OS=Bos taurus GN=RAF1 PE=2 SV=1)

HSP 1 Score: 73.1738 bits (178), Expect = 1.666e-16
Identity = 41/117 (35.04%), Postives = 67/117 (57.26%), Query Frame = 2
Query:  389 WEIDASLLKFEHKIVSGSYCDLYKGAFFSQDVAIKVLTNEHLNENIRREFAQEVHIMRKVRHMNVVQFIGACTRPPRLFIVTEFMSGGSIYDYLHKQKCRLNLPLPTQVANDVSKGM 739
            WEI+AS +    +I SGS+  +YKG +   DVA+K+L          + F  EV ++RK RH+N++ F+G  T+   L IVT++  G S+Y +LH Q+ +  +     +A   ++GM
Sbjct:  342 WEIEASEVMLSTRIGSGSFGTVYKGKWHG-DVAVKILKVVDPTPEQFQAFRNEVAVLRKTRHVNILLFMGYMTK-DNLAIVTQWCEGSSLYKHLHVQETKFQMFQLIDIARQTAQGM 456          

HSP 2 Score: 34.2686 bits (77), Expect = 1.666e-16
Identity = 13/25 (52.00%), Postives = 19/25 (76.00%), Query Frame = 1
Query:  730 QGNDYLHKNNKIHRDLEAANLLMNE 804
            QG DYLH  N IHRD+++ N+ ++E
Sbjct:  454 QGMDYLHAKNIIHRDMKSNNIFLHE 478          
BLAST of DY259877 vs. ExPASy Swiss-Prot
Match: RAF1_CHICK (RAF proto-oncogene serine/threonine-protein kinase OS=Gallus gallus GN=RAF1 PE=2 SV=1)

HSP 1 Score: 73.1738 bits (178), Expect = 1.666e-16
Identity = 41/117 (35.04%), Postives = 67/117 (57.26%), Query Frame = 2
Query:  389 WEIDASLLKFEHKIVSGSYCDLYKGAFFSQDVAIKVLTNEHLNENIRREFAQEVHIMRKVRHMNVVQFIGACTRPPRLFIVTEFMSGGSIYDYLHKQKCRLNLPLPTQVANDVSKGM 739
            WEI+AS +    +I SGS+  +YKG +   DVA+K+L          + F  EV ++RK RH+N++ F+G  T+   L IVT++  G S+Y +LH Q+ +  +     +A   ++GM
Sbjct:  342 WEIEASEVMLSTRIGSGSFGTVYKGKWHG-DVAVKILKVVDPTPEQFQAFRNEVAVLRKTRHVNILLFMGYMTK-DNLAIVTQWCEGSSLYKHLHVQETKFQMFQLIDIARQTAQGM 456          

HSP 2 Score: 34.2686 bits (77), Expect = 1.666e-16
Identity = 13/25 (52.00%), Postives = 19/25 (76.00%), Query Frame = 1
Query:  730 QGNDYLHKNNKIHRDLEAANLLMNE 804
            QG DYLH  N IHRD+++ N+ ++E
Sbjct:  454 QGMDYLHAKNIIHRDMKSNNIFLHE 478          
The following BLAST results are available for this feature:
BLAST of DY259877 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 114
Match NameE-valueIdentityDescription
DRKD_DICDI1.461e-1829.59Probable serine/threonine-protein kinase drkD OS=D... [more]
HT1_ARATH5.564e-1833.61Serine/threonine-protein kinase HT1 OS=Arabidopsis... [more]
SHKC_DICDI1.216e-1737.93Dual specificity protein kinase shkC OS=Dictyostel... [more]
SHKB_DICDI4.489e-1740.37Dual specificity protein kinase shkB OS=Dictyostel... [more]
RAF1_RAT1.282e-1635.04RAF proto-oncogene serine/threonine-protein kinase... [more]
RAF1_MOUSE1.282e-1635.04RAF proto-oncogene serine/threonine-protein kinase... [more]
RAF1_PONAB1.666e-1635.04RAF proto-oncogene serine/threonine-protein kinase... [more]
RAF1_HUMAN1.666e-1635.04RAF proto-oncogene serine/threonine-protein kinase... [more]
RAF1_BOVIN1.666e-1635.04RAF proto-oncogene serine/threonine-protein kinase... [more]
RAF1_CHICK1.666e-1635.04RAF proto-oncogene serine/threonine-protein kinase... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAP10YH19FM1 Fruit-TF Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY259877 ID=DY259877; Name=DY259877; organism=Citrus clementina; type=EST; length=981bp
GAGGATGTTCTAATGTTCAAAAGGTTGCTGCACGTGGCACGTGATCCTGC
CGCTACACCAGCAATTGAAGTCCGACTTGTGCTGGCTTATGCATGAAATT
ACAATCTCAACCAATGACAAGCCAAAGCTCCTCAGTCAGTTGACTTCTTT
ACTGTCCGAGATTGGGTTAAACATTCAAGAAGCACATGCATTTTCCACTG
TAGATGGCTACTCATTGGATGTGTTTGTTGTTGATGGTTGGCCACTTCAG
GAGACTGAACAGTTAAGAAATGTGCTGGCAAAGGAAATTCCCAAGGTTGA
GAATCATCATCATGTTGTATATCCTGTTGGGGAGCAAGAACAAAGTGGAA
TCAATCATGTAAACATACCAGCTGAAGGAATAGATGTTTGGGAAATTGAT
GCTAGCTTGCTGAAATTTGAACATAAAATTGTATCTGGATCCTATTGTGA
TTTGTATAAAGGTGCTTTCTTTAGTCAAGATGTGGCTATTAAAGTTCTTA
CTAATGAACATCTAAACGAGAATATACGGAGGGAGTTTGCACAAGAAGTT
CATATTATGAGGAAAGTTCGGCACATGAATGTCGTTCAATTCATTGGTGC
ATGTACTAGACCTCCAAGGCTGTTCATTGTGACTGAATTTATGTCTGGTG
GAAGCATCTATGACTACCTGCATAAACAAAAGTGCCGTTTAAACCTTCCT
TTGCCTACTCAAGTTGCCAATGATGTTTCCAAGGGAATGATTACTTGCAC
AAAAACAATAAAATCCATAGGGACCTGGAAGCGGCCAATCTTTTGATGAA
TGAAAATGGATTAAGAAAATTCCAAATTCCCCCGTTAACCTTATAAATTT
TTGGCGAAAACCCCAGGTTACCTGGGAATTTTTTCCCGGAATTTTAGGGA
AACCTTGATTTTCCCACCACCAATTCCCAAAACTAAAAGATAATAATAAG
GATATGCTCTCCCGCCCCACGGAGAAGTAGC
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