DY259877

Overview
NameDY259877
Unique NameDY259877
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length981
Libraries
Library NameType
Fruit-TFcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY259877 vs. ExPASy Swiss-Prot
Match: EPB1B_XENLA (Ephrin type-B receptor 1-B (Fragment) OS=Xenopus laevis GN=ephb1-B PE=2 SV=1)

HSP 1 Score: 56.9954 bits (136), Expect = 7.869e-11
Identity = 36/121 (29.75%), Postives = 60/121 (49.59%), Query Frame = 2
Query:  392 EIDASLLKFEHKIVSGSYCDLYKGAFFSQD-----VAIKVLTNEHLNENIRREFAQEVHIMRKVRHMNVVQFIGACTRPPRLFIVTEFMSGGSIYDYLHKQKCRLNLPLPTQVANDVSKGM 739
            EID S +K E  I +G + ++YKG           VAIK L   + +E  RR+F  E  IM +  H N+++  G  T+   + I+TEFM  G++  +L +   +  +     +   ++ GM
Sbjct:  531 EIDVSFVKIEEVIGAGEFGEVYKGRLKLPSKREISVAIKTLKAGY-SEKQRRDFLSEASIMGQFDHPNIIRLEGVVTKSRPVMIITEFMENGALDSFLRQNDGQFTVIQLVGMLRGIAAGM 650          

HSP 2 Score: 31.187 bits (69), Expect = 7.869e-11
Identity = 13/25 (52.00%), Postives = 17/25 (68.00%), Query Frame = 1
Query:  733 GNDYLHKNNKIHRDLEAANLLMNEN 807
            G  YL + N +HRDL A N+L+N N
Sbjct:  649 GMKYLSEMNYVHRDLAARNILVNSN 673          
BLAST of DY259877 vs. ExPASy Swiss-Prot
Match: PYK4_DICDI (Dual specificity protein kinase pyk4 OS=Dictyostelium discoideum GN=pyk4 PE=1 SV=1)

HSP 1 Score: 61.6178 bits (148), Expect = 7.947e-11
Identity = 41/128 (32.03%), Postives = 68/128 (53.12%), Query Frame = 2
Query:  389 WEIDASLLKFEHKIVSGS---YCDLYKGAFFSQDVAIKVLTNEH-LNENIRREFAQEVHIMRKVRHMNVVQFIGAC----TRPPRLFIVTEFMSGGSIYDYLHKQK--CRLNLPLPTQVANDVSKGMI 742
            WEI+ + LKF      G    +  + KG +   +VAIK++   H  N  +   F  EV I+  +RH N+VQFI AC     +     IV+E+MSGG++  ++  ++    +N  L  ++  D++KGM+
Sbjct:  289 WEIEFNELKFNKDDTVGGDGFFSVVKKGYYNETEVAIKLIKKAHGENVTVCDTFYHEVLIISNLRHPNIVQFIAACIKFDNKEVNHCIVSEWMSGGNLSQFISNERKILEINPHLRVKILLDIAKGML 416          

HSP 2 Score: 26.5646 bits (57), Expect = 7.947e-11
Identity = 11/24 (45.83%), Postives = 16/24 (66.67%), Query Frame = 1
Query:  730 QGNDYLHKNNKIHRDLEAANLLMN 801
            +G  Y H+   IHRDL + N+L+N
Sbjct:  413 KGMLYSHRQGIIHRDLTSNNVLLN 436          
BLAST of DY259877 vs. ExPASy Swiss-Prot
Match: SRC64_DROME (Tyrosine-protein kinase Src64B OS=Drosophila melanogaster GN=Src64B PE=1 SV=3)

HSP 1 Score: 55.8398 bits (133), Expect = 7.980e-11
Identity = 37/121 (30.58%), Postives = 64/121 (52.89%), Query Frame = 2
Query:  383 DVWEIDASLLKFEHKIVSGSYCDLYKGAFFSQ-DVAIKVLTNEHLNENIRREFAQEVHIMRKVRHMNVVQFIGACTRPPRLFIVTEFMSGGSIYDYLHKQKCR-LNLPLPTQVANDVSKGM 739
            D +EI  S ++   K+  G++ +++ G + +  DVA+K L    ++      F QE  IM+K RH  +V     C++   ++IV E+MS GS+ D+L +   R L+      +A  V+ GM
Sbjct:  275 DKYEIPRSEIQLLRKLGRGNFGEVFYGKWRNSIDVAVKTLREGTMST---AAFLQEAAIMKKFRHNRLVALYAVCSQEEPIYIVQEYMSKGSLLDFLREGDGRYLHFEDLIYIATQVASGM 392          

HSP 2 Score: 32.3426 bits (72), Expect = 7.980e-11
Identity = 14/29 (48.28%), Postives = 18/29 (62.07%), Query Frame = 1
Query:  733 GNDYLHKNNKIHRDLEAANLLMNENGLRK 819
            G +YL     IHRDL A N+L+ EN + K
Sbjct:  391 GMEYLESKQLIHRDLAARNVLIGENNVAK 419          
BLAST of DY259877 vs. ExPASy Swiss-Prot
Match: FYN_MOUSE (Proto-oncogene tyrosine-protein kinase Fyn OS=Mus musculus GN=Fyn PE=1 SV=3)

HSP 1 Score: 58.9214 bits (141), Expect = 7.986e-11
Identity = 40/121 (33.06%), Postives = 65/121 (53.72%), Query Frame = 2
Query:  383 DVWEIDASLLKFEHKIVSGSYCDLYKGAFFSQD-VAIKVLTNEHLNENIRREFAQEVHIMRKVRHMNVVQFIGACTRPPRLFIVTEFMSGGSIYDYLHKQKCR-LNLPLPTQVANDVSKGM 739
            DVWEI    L+   ++ +G + +++ G +     VAIK L    ++      F +E  IM+K++H  +VQ     +  P ++IVTE+MS GS+ D+L   + R L LP    +A  V+ GM
Sbjct:  262 DVWEIPRESLQLIKRLGNGQFGEVWLGTWNGNTKVAIKTLKPGTMSPE---SFLEEAQIMKKLKHDKLVQLYAVVSEEP-IYIVTEYMSKGSLLDFLKDGEGRALKLPNLVDMAAQVAAGM 378          

HSP 2 Score: 29.261 bits (64), Expect = 7.986e-11
Identity = 14/27 (51.85%), Postives = 19/27 (70.37%), Query Frame = 1
Query:  733 GNDYLHKNNKIHRDLEAANLLMNENGL 813
            G  Y+ + N IHRDL +AN+L+  NGL
Sbjct:  377 GMAYIERMNYIHRDLRSANILVG-NGL 402          
The following BLAST results are available for this feature:
BLAST of DY259877 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 114
Match NameE-valueIdentityDescription
EPB1B_XENLA7.869e-1129.75Ephrin type-B receptor 1-B (Fragment) OS=Xenopus l... [more]
PYK4_DICDI7.947e-1132.03Dual specificity protein kinase pyk4 OS=Dictyostel... [more]
SRC64_DROME7.980e-1130.58Tyrosine-protein kinase Src64B OS=Drosophila melan... [more]
FYN_MOUSE7.986e-1133.06Proto-oncogene tyrosine-protein kinase Fyn OS=Mus ... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAP10YH19FM1 Fruit-TF Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY259877 ID=DY259877; Name=DY259877; organism=Citrus clementina; type=EST; length=981bp
GAGGATGTTCTAATGTTCAAAAGGTTGCTGCACGTGGCACGTGATCCTGC
CGCTACACCAGCAATTGAAGTCCGACTTGTGCTGGCTTATGCATGAAATT
ACAATCTCAACCAATGACAAGCCAAAGCTCCTCAGTCAGTTGACTTCTTT
ACTGTCCGAGATTGGGTTAAACATTCAAGAAGCACATGCATTTTCCACTG
TAGATGGCTACTCATTGGATGTGTTTGTTGTTGATGGTTGGCCACTTCAG
GAGACTGAACAGTTAAGAAATGTGCTGGCAAAGGAAATTCCCAAGGTTGA
GAATCATCATCATGTTGTATATCCTGTTGGGGAGCAAGAACAAAGTGGAA
TCAATCATGTAAACATACCAGCTGAAGGAATAGATGTTTGGGAAATTGAT
GCTAGCTTGCTGAAATTTGAACATAAAATTGTATCTGGATCCTATTGTGA
TTTGTATAAAGGTGCTTTCTTTAGTCAAGATGTGGCTATTAAAGTTCTTA
CTAATGAACATCTAAACGAGAATATACGGAGGGAGTTTGCACAAGAAGTT
CATATTATGAGGAAAGTTCGGCACATGAATGTCGTTCAATTCATTGGTGC
ATGTACTAGACCTCCAAGGCTGTTCATTGTGACTGAATTTATGTCTGGTG
GAAGCATCTATGACTACCTGCATAAACAAAAGTGCCGTTTAAACCTTCCT
TTGCCTACTCAAGTTGCCAATGATGTTTCCAAGGGAATGATTACTTGCAC
AAAAACAATAAAATCCATAGGGACCTGGAAGCGGCCAATCTTTTGATGAA
TGAAAATGGATTAAGAAAATTCCAAATTCCCCCGTTAACCTTATAAATTT
TTGGCGAAAACCCCAGGTTACCTGGGAATTTTTTCCCGGAATTTTAGGGA
AACCTTGATTTTCCCACCACCAATTCCCAAAACTAAAAGATAATAATAAG
GATATGCTCTCCCGCCCCACGGAGAAGTAGC
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