DY259877

Overview
NameDY259877
Unique NameDY259877
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length981
Libraries
Library NameType
Fruit-TFcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY259877 vs. ExPASy Swiss-Prot
Match: ARAF_HUMAN (A-Raf proto-oncogene serine/threonine-protein kinase OS=Homo sapiens GN=ARAF PE=1 SV=2)

HSP 1 Score: 68.9366 bits (167), Expect = 1.765e-15
Identity = 37/117 (31.62%), Postives = 65/117 (55.56%), Query Frame = 2
Query:  389 WEIDASLLKFEHKIVSGSYCDLYKGAFFSQDVAIKVLTNEHLNENIRREFAQEVHIMRKVRHMNVVQFIGACTRPPRLFIVTEFMSGGSIYDYLHKQKCRLNLPLPTQVANDVSKGM 739
            WE+  S ++   +I +GS+  +++G +   DVA+KVL          + F  E+ ++RK RH+N++ F+G  TR P   I+T++  G S+Y +LH    R ++     VA   ++GM
Sbjct:  303 WEVPPSEVQLLKRIGTGSFGTVFRGRWHG-DVAVKVLKVSQPTAEQAQAFKNEMQVLRKTRHVNILLFMGFMTR-PGFAIITQWCEGSSLYHHLHVADTRFDMVQLIDVARQTAQGM 417          

HSP 2 Score: 35.039 bits (79), Expect = 1.765e-15
Identity = 14/25 (56.00%), Postives = 19/25 (76.00%), Query Frame = 1
Query:  730 QGNDYLHKNNKIHRDLEAANLLMNE 804
            QG DYLH  N IHRDL++ N+ ++E
Sbjct:  415 QGMDYLHAKNIIHRDLKSNNIFLHE 439          
BLAST of DY259877 vs. ExPASy Swiss-Prot
Match: BRAF1_COTJA (B-Raf proto-oncogene serine/threonine-protein kinase OS=Coturnix coturnix japonica GN=BRAF PE=2 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 2.278e-15
Identity = 40/119 (33.61%), Postives = 66/119 (55.46%), Query Frame = 2
Query:  383 DVWEIDASLLKFEHKIVSGSYCDLYKGAFFSQDVAIKVLTNEHLNENIRREFAQEVHIMRKVRHMNVVQFIGACTRPPRLFIVTEFMSGGSIYDYLHKQKCRLNLPLPTQVANDVSKGM 739
            D WEI    +    +I SGS+  +YKG +   DVA+K+L          + F  EV ++RK RH+N++ F+G  T+ P+L IVT++  G S+Y +LH  + +  +     +A   ++GM
Sbjct:  488 DDWEIPDGQITVGQRIGSGSFGTVYKGKWHG-DVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYSTK-PQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGM 604          

HSP 2 Score: 33.4982 bits (75), Expect = 2.278e-15
Identity = 13/26 (50.00%), Postives = 20/26 (76.92%), Query Frame = 1
Query:  730 QGNDYLHKNNKIHRDLEAANLLMNEN 807
            QG DYLH  + IHRDL++ N+ ++E+
Sbjct:  602 QGMDYLHAKSIIHRDLKSNNIFLHED 627          
BLAST of DY259877 vs. ExPASy Swiss-Prot
Match: BRAF1_MOUSE (B-Raf proto-oncogene serine/threonine-protein kinase OS=Mus musculus GN=Braf PE=1 SV=2)

HSP 1 Score: 70.0922 bits (170), Expect = 2.278e-15
Identity = 40/119 (33.61%), Postives = 66/119 (55.46%), Query Frame = 2
Query:  383 DVWEIDASLLKFEHKIVSGSYCDLYKGAFFSQDVAIKVLTNEHLNENIRREFAQEVHIMRKVRHMNVVQFIGACTRPPRLFIVTEFMSGGSIYDYLHKQKCRLNLPLPTQVANDVSKGM 739
            D WEI    +    +I SGS+  +YKG +   DVA+K+L          + F  EV ++RK RH+N++ F+G  T+ P+L IVT++  G S+Y +LH  + +  +     +A   ++GM
Sbjct:  485 DDWEIPDGQITVGQRIGSGSFGTVYKGKWHG-DVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYSTK-PQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGM 601          

HSP 2 Score: 33.4982 bits (75), Expect = 2.278e-15
Identity = 13/26 (50.00%), Postives = 20/26 (76.92%), Query Frame = 1
Query:  730 QGNDYLHKNNKIHRDLEAANLLMNEN 807
            QG DYLH  + IHRDL++ N+ ++E+
Sbjct:  599 QGMDYLHAKSIIHRDLKSNNIFLHED 624          
BLAST of DY259877 vs. ExPASy Swiss-Prot
Match: BRAF1_CHICK (B-Raf proto-oncogene serine/threonine-protein kinase OS=Gallus gallus GN=BRAF PE=1 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 2.278e-15
Identity = 40/119 (33.61%), Postives = 66/119 (55.46%), Query Frame = 2
Query:  383 DVWEIDASLLKFEHKIVSGSYCDLYKGAFFSQDVAIKVLTNEHLNENIRREFAQEVHIMRKVRHMNVVQFIGACTRPPRLFIVTEFMSGGSIYDYLHKQKCRLNLPLPTQVANDVSKGM 739
            D WEI    +    +I SGS+  +YKG +   DVA+K+L          + F  EV ++RK RH+N++ F+G  T+ P+L IVT++  G S+Y +LH  + +  +     +A   ++GM
Sbjct:  488 DDWEIPDGQITVGQRIGSGSFGTVYKGKWHG-DVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYSTK-PQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGM 604          

HSP 2 Score: 33.4982 bits (75), Expect = 2.278e-15
Identity = 13/26 (50.00%), Postives = 20/26 (76.92%), Query Frame = 1
Query:  730 QGNDYLHKNNKIHRDLEAANLLMNEN 807
            QG DYLH  + IHRDL++ N+ ++E+
Sbjct:  602 QGMDYLHAKSIIHRDLKSNNIFLHED 627          
BLAST of DY259877 vs. ExPASy Swiss-Prot
Match: BRAF1_HUMAN (B-Raf proto-oncogene serine/threonine-protein kinase OS=Homo sapiens GN=BRAF PE=1 SV=4)

HSP 1 Score: 70.0922 bits (170), Expect = 2.281e-15
Identity = 40/119 (33.61%), Postives = 66/119 (55.46%), Query Frame = 2
Query:  383 DVWEIDASLLKFEHKIVSGSYCDLYKGAFFSQDVAIKVLTNEHLNENIRREFAQEVHIMRKVRHMNVVQFIGACTRPPRLFIVTEFMSGGSIYDYLHKQKCRLNLPLPTQVANDVSKGM 739
            D WEI    +    +I SGS+  +YKG +   DVA+K+L          + F  EV ++RK RH+N++ F+G  T+ P+L IVT++  G S+Y +LH  + +  +     +A   ++GM
Sbjct:  448 DDWEIPDGQITVGQRIGSGSFGTVYKGKWHG-DVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYSTK-PQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGM 564          

HSP 2 Score: 33.4982 bits (75), Expect = 2.281e-15
Identity = 13/26 (50.00%), Postives = 20/26 (76.92%), Query Frame = 1
Query:  730 QGNDYLHKNNKIHRDLEAANLLMNEN 807
            QG DYLH  + IHRDL++ N+ ++E+
Sbjct:  562 QGMDYLHAKSIIHRDLKSNNIFLHED 587          
BLAST of DY259877 vs. ExPASy Swiss-Prot
Match: ARAF_PIG (A-Raf proto-oncogene serine/threonine-protein kinase OS=Sus scrofa GN=ARAF PE=2 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 2.293e-15
Identity = 37/117 (31.62%), Postives = 65/117 (55.56%), Query Frame = 2
Query:  389 WEIDASLLKFEHKIVSGSYCDLYKGAFFSQDVAIKVLTNEHLNENIRREFAQEVHIMRKVRHMNVVQFIGACTRPPRLFIVTEFMSGGSIYDYLHKQKCRLNLPLPTQVANDVSKGM 739
            WE+  S ++   +I +GS+  +++G +   DVA+KVL          + F  E+ ++RK RH+N++ F+G  TR P   I+T++  G S+Y +LH    R ++     VA   ++GM
Sbjct:  303 WEVPPSEVQLLKRIGTGSFGTVFRGRWHG-DVAVKVLKVAQPTAEQAQAFKNEMQVLRKTRHVNILLFMGFMTR-PGFAIITQWCEGSSLYHHLHVADTRFDMVQLIDVARQTAQGM 417          

HSP 2 Score: 35.039 bits (79), Expect = 2.293e-15
Identity = 14/25 (56.00%), Postives = 19/25 (76.00%), Query Frame = 1
Query:  730 QGNDYLHKNNKIHRDLEAANLLMNE 804
            QG DYLH  N IHRDL++ N+ ++E
Sbjct:  415 QGMDYLHAKNIIHRDLKSNNIFLHE 439          
BLAST of DY259877 vs. ExPASy Swiss-Prot
Match: ARAF_RAT (A-Raf proto-oncogene serine/threonine-protein kinase OS=Rattus norvegicus GN=Araf PE=2 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 2.293e-15
Identity = 37/117 (31.62%), Postives = 65/117 (55.56%), Query Frame = 2
Query:  389 WEIDASLLKFEHKIVSGSYCDLYKGAFFSQDVAIKVLTNEHLNENIRREFAQEVHIMRKVRHMNVVQFIGACTRPPRLFIVTEFMSGGSIYDYLHKQKCRLNLPLPTQVANDVSKGM 739
            WE+  S ++   +I +GS+  +++G +   DVA+KVL          + F  E+ ++RK RH+N++ F+G  TR P   I+T++  G S+Y +LH    R ++     VA   ++GM
Sbjct:  301 WEVPPSEVQLLKRIGTGSFGTVFRGRWHG-DVAVKVLKVAQPTAEQAQAFKNEMQVLRKTRHVNILLFMGFMTR-PGFAIITQWCEGSSLYHHLHVADTRFDMVQLIDVARQTAQGM 415          

HSP 2 Score: 35.039 bits (79), Expect = 2.293e-15
Identity = 14/25 (56.00%), Postives = 19/25 (76.00%), Query Frame = 1
Query:  730 QGNDYLHKNNKIHRDLEAANLLMNE 804
            QG DYLH  N IHRDL++ N+ ++E
Sbjct:  413 QGMDYLHAKNIIHRDLKSNNIFLHE 437          
BLAST of DY259877 vs. ExPASy Swiss-Prot
Match: ARAF_MOUSE (A-Raf proto-oncogene serine/threonine-protein kinase OS=Mus musculus GN=Araf PE=2 SV=2)

HSP 1 Score: 68.5514 bits (166), Expect = 2.293e-15
Identity = 37/117 (31.62%), Postives = 65/117 (55.56%), Query Frame = 2
Query:  389 WEIDASLLKFEHKIVSGSYCDLYKGAFFSQDVAIKVLTNEHLNENIRREFAQEVHIMRKVRHMNVVQFIGACTRPPRLFIVTEFMSGGSIYDYLHKQKCRLNLPLPTQVANDVSKGM 739
            WE+  S ++   +I +GS+  +++G +   DVA+KVL          + F  E+ ++RK RH+N++ F+G  TR P   I+T++  G S+Y +LH    R ++     VA   ++GM
Sbjct:  301 WEVPPSEVQLLKRIGTGSFGTVFRGRWHG-DVAVKVLKVAQPTAEQAQAFKNEMQVLRKTRHVNILLFMGFMTR-PGFAIITQWCEGSSLYHHLHVADTRFDMVQLIDVARQTAQGM 415          

HSP 2 Score: 35.039 bits (79), Expect = 2.293e-15
Identity = 14/25 (56.00%), Postives = 19/25 (76.00%), Query Frame = 1
Query:  730 QGNDYLHKNNKIHRDLEAANLLMNE 804
            QG DYLH  N IHRDL++ N+ ++E
Sbjct:  413 QGMDYLHAKNIIHRDLKSNNIFLHE 437          
BLAST of DY259877 vs. ExPASy Swiss-Prot
Match: RMIL_AVEVR (Serine/threonine-protein kinase-transforming protein Rmil OS=Avian rous-associated virus type 1 GN=V-RMIL PE=3 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 2.310e-15
Identity = 40/119 (33.61%), Postives = 66/119 (55.46%), Query Frame = 2
Query:  383 DVWEIDASLLKFEHKIVSGSYCDLYKGAFFSQDVAIKVLTNEHLNENIRREFAQEVHIMRKVRHMNVVQFIGACTRPPRLFIVTEFMSGGSIYDYLHKQKCRLNLPLPTQVANDVSKGM 739
            D WEI    +    +I SGS+  +YKG +   DVA+K+L          + F  EV ++RK RH+N++ F+G  T+ P+L IVT++  G S+Y +LH  + +  +     +A   ++GM
Sbjct:   74 DDWEIPDGQITVGQRIGSGSFGTVYKGKWHG-DVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYSTK-PQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGM 190          

HSP 2 Score: 33.4982 bits (75), Expect = 2.310e-15
Identity = 13/26 (50.00%), Postives = 20/26 (76.92%), Query Frame = 1
Query:  730 QGNDYLHKNNKIHRDLEAANLLMNEN 807
            QG DYLH  + IHRDL++ N+ ++E+
Sbjct:  188 QGMDYLHAKSIIHRDLKSNNIFLHED 213          
BLAST of DY259877 vs. ExPASy Swiss-Prot
Match: RMIL_AVII1 (Serine/threonine-protein kinase-transforming protein Rmil OS=Avian retrovirus IC10 GN=V-RMIL PE=3 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 2.322e-15
Identity = 40/119 (33.61%), Postives = 66/119 (55.46%), Query Frame = 2
Query:  383 DVWEIDASLLKFEHKIVSGSYCDLYKGAFFSQDVAIKVLTNEHLNENIRREFAQEVHIMRKVRHMNVVQFIGACTRPPRLFIVTEFMSGGSIYDYLHKQKCRLNLPLPTQVANDVSKGM 739
            D WEI    +    +I SGS+  +YKG +   DVA+K+L          + F  EV ++RK RH+N++ F+G  T+ P+L IVT++  G S+Y +LH  + +  +     +A   ++GM
Sbjct:   58 DDWEIPDGQITVGQRIGSGSFGTVYKGKWHG-DVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYSTK-PQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGM 174          

HSP 2 Score: 33.4982 bits (75), Expect = 2.322e-15
Identity = 13/26 (50.00%), Postives = 20/26 (76.92%), Query Frame = 1
Query:  730 QGNDYLHKNNKIHRDLEAANLLMNEN 807
            QG DYLH  + IHRDL++ N+ ++E+
Sbjct:  172 QGMDYLHAKSIIHRDLKSNNIFLHED 197          
The following BLAST results are available for this feature:
BLAST of DY259877 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 114
Match NameE-valueIdentityDescription
ARAF_HUMAN1.765e-1531.62A-Raf proto-oncogene serine/threonine-protein kina... [more]
BRAF1_COTJA2.278e-1533.61B-Raf proto-oncogene serine/threonine-protein kina... [more]
BRAF1_MOUSE2.278e-1533.61B-Raf proto-oncogene serine/threonine-protein kina... [more]
BRAF1_CHICK2.278e-1533.61B-Raf proto-oncogene serine/threonine-protein kina... [more]
BRAF1_HUMAN2.281e-1533.61B-Raf proto-oncogene serine/threonine-protein kina... [more]
ARAF_PIG2.293e-1531.62A-Raf proto-oncogene serine/threonine-protein kina... [more]
ARAF_RAT2.293e-1531.62A-Raf proto-oncogene serine/threonine-protein kina... [more]
ARAF_MOUSE2.293e-1531.62A-Raf proto-oncogene serine/threonine-protein kina... [more]
RMIL_AVEVR2.310e-1533.61Serine/threonine-protein kinase-transforming prote... [more]
RMIL_AVII12.322e-1533.61Serine/threonine-protein kinase-transforming prote... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAP10YH19FM1 Fruit-TF Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY259877 ID=DY259877; Name=DY259877; organism=Citrus clementina; type=EST; length=981bp
GAGGATGTTCTAATGTTCAAAAGGTTGCTGCACGTGGCACGTGATCCTGC
CGCTACACCAGCAATTGAAGTCCGACTTGTGCTGGCTTATGCATGAAATT
ACAATCTCAACCAATGACAAGCCAAAGCTCCTCAGTCAGTTGACTTCTTT
ACTGTCCGAGATTGGGTTAAACATTCAAGAAGCACATGCATTTTCCACTG
TAGATGGCTACTCATTGGATGTGTTTGTTGTTGATGGTTGGCCACTTCAG
GAGACTGAACAGTTAAGAAATGTGCTGGCAAAGGAAATTCCCAAGGTTGA
GAATCATCATCATGTTGTATATCCTGTTGGGGAGCAAGAACAAAGTGGAA
TCAATCATGTAAACATACCAGCTGAAGGAATAGATGTTTGGGAAATTGAT
GCTAGCTTGCTGAAATTTGAACATAAAATTGTATCTGGATCCTATTGTGA
TTTGTATAAAGGTGCTTTCTTTAGTCAAGATGTGGCTATTAAAGTTCTTA
CTAATGAACATCTAAACGAGAATATACGGAGGGAGTTTGCACAAGAAGTT
CATATTATGAGGAAAGTTCGGCACATGAATGTCGTTCAATTCATTGGTGC
ATGTACTAGACCTCCAAGGCTGTTCATTGTGACTGAATTTATGTCTGGTG
GAAGCATCTATGACTACCTGCATAAACAAAAGTGCCGTTTAAACCTTCCT
TTGCCTACTCAAGTTGCCAATGATGTTTCCAAGGGAATGATTACTTGCAC
AAAAACAATAAAATCCATAGGGACCTGGAAGCGGCCAATCTTTTGATGAA
TGAAAATGGATTAAGAAAATTCCAAATTCCCCCGTTAACCTTATAAATTT
TTGGCGAAAACCCCAGGTTACCTGGGAATTTTTTCCCGGAATTTTAGGGA
AACCTTGATTTTCCCACCACCAATTCCCAAAACTAAAAGATAATAATAAG
GATATGCTCTCCCGCCCCACGGAGAAGTAGC
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