DY259877

Overview
NameDY259877
Unique NameDY259877
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length981
Libraries
Library NameType
Fruit-TFcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY259877 vs. ExPASy Swiss-Prot
Match: Y9963_DICDI (Probable serine/threonine-protein kinase DDB_G0272254 OS=Dictyostelium discoideum GN=DDB_G0272254 PE=3 SV=1)

HSP 1 Score: 58.9214 bits (141), Expect = 7.452e-12
Identity = 39/138 (28.26%), Postives = 73/138 (52.90%), Query Frame = 2
Query:  350 INHVNIPAEGIDVWEIDASLLKFEHKIVSGSYCDLYKGAFFSQDVAIKVLTN--EHLNENIRREFAQEVHIMRKVRHMNVVQFIGACTRPPRLFIVTEFMSGGSIYDYLH------KQKCRLNLPLPTQVANDVSKGM 739
            +N V +P     V  I+ S +K + +I  G +  + KG +  +DVA+K L +  +   E + +EF  EV ++  ++H N+V   G    P  + IV EF+  G++++ +H      +Q  +L+  L   +A D+++GM
Sbjct: 1054 VNTVTLPISS-SVTMINYSDIKIDKEIGKGHFSKVLKGNWKGKDVAVKKLNSNKDKAREEMIQEFKAEVELLGSLQHPNLVTCYGYSLNP--MCIVMEFLPSGNLFELIHSKPSEQQQSIKLDSTLILAIAFDIARGM 1188          

HSP 2 Score: 32.7278 bits (73), Expect = 7.452e-12
Identity = 13/26 (50.00%), Postives = 21/26 (80.77%), Query Frame = 1
Query:  730 QGNDYLHKNNKIHRDLEAANLLMNEN 807
            +G  +LH  N IHRDL+++NLLM+++
Sbjct: 1186 RGMQHLHTRNIIHRDLKSSNLLMDKH 1211          
BLAST of DY259877 vs. ExPASy Swiss-Prot
Match: FES_FELCA (Proto-oncogene tyrosine-protein kinase Fes/Fps OS=Felis catus GN=FES PE=3 SV=2)

HSP 1 Score: 64.3142 bits (155), Expect = 7.545e-12
Identity = 33/120 (27.50%), Postives = 62/120 (51.67%), Query Frame = 2
Query:  383 DVWEIDASLLKFEHKIVSGSYCDLYKGAFFSQDVAIKVLT-NEHLNENIRREFAQEVHIMRKVRHMNVVQFIGACTRPPRLFIVTEFMSGGSIYDYLHKQKCRLNLPLPTQVANDVSKGM 739
            D W ++   L    +I  G++ +++ G   + +  + V +  E L  +I+ +F QE  I+++  H N+V+ IG CT+   ++IV E + GG    +L  +  RL +    Q+  D + GM
Sbjct:  550 DKWVLNHEDLVLGEQIGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDIKAKFLQEAKILKQYSHPNIVRLIGVCTQKQPIYIVMELVQGGDFLTFLRTEGARLRMKTLLQMVGDAAAGM 669          

HSP 2 Score: 27.335 bits (59), Expect = 7.545e-12
Identity = 13/29 (44.83%), Postives = 16/29 (55.17%), Query Frame = 1
Query:  733 GNDYLHKNNKIHRDLEAANLLMNENGLRK 819
            G +YL     IHRDL A N L+ E  + K
Sbjct:  668 GMEYLESKCCIHRDLAARNCLVTEKNVLK 696          
BLAST of DY259877 vs. ExPASy Swiss-Prot
Match: FES_FSVGA (Tyrosine-protein kinase transforming protein Fes OS=Feline sarcoma virus (strain Gardner-Arnstein) GN=V-FES PE=3 SV=1)

HSP 1 Score: 64.3142 bits (155), Expect = 7.606e-12
Identity = 33/120 (27.50%), Postives = 62/120 (51.67%), Query Frame = 2
Query:  383 DVWEIDASLLKFEHKIVSGSYCDLYKGAFFSQDVAIKVLT-NEHLNENIRREFAQEVHIMRKVRHMNVVQFIGACTRPPRLFIVTEFMSGGSIYDYLHKQKCRLNLPLPTQVANDVSKGM 739
            D W ++   L    +I  G++ +++ G   + +  + V +  E L  +I+ +F QE  I+++  H N+V+ IG CT+   ++IV E + GG    +L  +  RL +    Q+  D + GM
Sbjct:  339 DKWVLNHEDLVLGEQIGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDIKAKFLQEAKILKQYSHPNIVRLIGVCTQKQPIYIVMELVQGGDFLTFLRTEGARLRMKTLLQMVGDAAAGM 458          

HSP 2 Score: 27.335 bits (59), Expect = 7.606e-12
Identity = 13/29 (44.83%), Postives = 16/29 (55.17%), Query Frame = 1
Query:  733 GNDYLHKNNKIHRDLEAANLLMNENGLRK 819
            G +YL     IHRDL A N L+ E  + K
Sbjct:  457 GMEYLESKCCIHRDLAARNCLVTEKNVLK 485          
BLAST of DY259877 vs. ExPASy Swiss-Prot
Match: YES_CHICK (Tyrosine-protein kinase Yes OS=Gallus gallus GN=YES1 PE=2 SV=3)

HSP 1 Score: 59.6918 bits (143), Expect = 7.632e-12
Identity = 40/121 (33.06%), Postives = 65/121 (53.72%), Query Frame = 2
Query:  383 DVWEIDASLLKFEHKIVSGSYCDLYKGAFF-SQDVAIKVLTNEHLNENIRREFAQEVHIMRKVRHMNVVQFIGACTRPPRLFIVTEFMSGGSIYDYLHKQKCR-LNLPLPTQVANDVSKGM 739
            D WEI    L+ E K+  G + +++ G +  +  VAIK L    +   +   F QE  IM+K+RH  +V      +  P ++IVTEFM+ GS+ D+L + + + L LP    +A  ++ GM
Sbjct:  266 DAWEIPRESLRLEVKLGQGCFGEVWMGTWNGTTKVAIKTLKPGTM---MPEAFLQEAQIMKKLRHDKLVPLYAVVSEEP-IYIVTEFMTKGSLLDFLKEGEGKFLKLPQLVDMAAQIADGM 382          

HSP 2 Score: 31.9574 bits (71), Expect = 7.632e-12
Identity = 13/25 (52.00%), Postives = 18/25 (72.00%), Query Frame = 1
Query:  733 GNDYLHKNNKIHRDLEAANLLMNEN 807
            G  Y+ + N IHRDL AAN+L+ +N
Sbjct:  381 GMAYIERMNYIHRDLRAANILVGDN 405          
BLAST of DY259877 vs. ExPASy Swiss-Prot
Match: SRC_RAT (Proto-oncogene tyrosine-protein kinase Src OS=Rattus norvegicus GN=Src PE=1 SV=3)

HSP 1 Score: 59.6918 bits (143), Expect = 7.634e-12
Identity = 38/121 (31.40%), Postives = 64/121 (52.89%), Query Frame = 2
Query:  383 DVWEIDASLLKFEHKIVSGSYCDLYKGAFFSQD-VAIKVLTNEHLNENIRREFAQEVHIMRKVRHMNVVQFIGACTRPPRLFIVTEFMSGGSIYDYLHKQKCR-LNLPLPTQVANDVSKGM 739
            D WEI    L+ E K+  G + +++ G +     VAIK L    ++      F QE  +M+K+RH  +VQ     +  P ++IVTE+M+ GS+ D+L  +  + L LP    ++  ++ GM
Sbjct:  261 DAWEIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEA---FLQEAQVMKKLRHEKLVQLYAVVSEEP-IYIVTEYMNKGSLLDFLKGETGKYLRLPQLVDMSAQIASGM 377          

HSP 2 Score: 31.9574 bits (71), Expect = 7.634e-12
Identity = 13/25 (52.00%), Postives = 18/25 (72.00%), Query Frame = 1
Query:  733 GNDYLHKNNKIHRDLEAANLLMNEN 807
            G  Y+ + N +HRDL AAN+L+ EN
Sbjct:  376 GMAYVDRMNYVHRDLRAANILVGEN 400          
BLAST of DY259877 vs. ExPASy Swiss-Prot
Match: BLK_MOUSE (Tyrosine-protein kinase Blk OS=Mus musculus GN=Blk PE=1 SV=3)

HSP 1 Score: 58.9214 bits (141), Expect = 7.649e-12
Identity = 38/121 (31.40%), Postives = 66/121 (54.55%), Query Frame = 2
Query:  383 DVWEIDASLLKFEHKIVSGSYCDLYKGAFFSQ-DVAIKVLTNEHLNENIRREFAQEVHIMRKVRHMNVVQFIGACTRPPRLFIVTEFMSGGSIYDYLHKQK-CRLNLPLPTQVANDVSKGM 739
            D WEI    LK   K+ SG + +++ G + +   VAIK L    ++      F  E ++M+ ++H  +V+     TR P ++IVTE+M+ G + D+L   +  RL+LP    ++  V++GM
Sbjct:  226 DEWEIPRQSLKLVRKLGSGQFGEVWMGYYKNNMKVAIKTLKEGTMSPEA---FLGEANVMKTLQHERLVRLYAVVTREP-IYIVTEYMARGCLLDFLKTDEGSRLSLPRLIDMSAQVAEGM 342          

HSP 2 Score: 32.7278 bits (73), Expect = 7.649e-12
Identity = 13/25 (52.00%), Postives = 19/25 (76.00%), Query Frame = 1
Query:  730 QGNDYLHKNNKIHRDLEAANLLMNE 804
            +G  Y+ + N IHRDL AAN+L++E
Sbjct:  340 EGMAYIERMNSIHRDLRAANILVSE 364          
BLAST of DY259877 vs. ExPASy Swiss-Prot
Match: FES_FSVST (Tyrosine-protein kinase transforming protein Fes OS=Feline sarcoma virus (strain Snyder-Theilen) GN=V-FES PE=3 SV=1)

HSP 1 Score: 64.3142 bits (155), Expect = 7.659e-12
Identity = 33/120 (27.50%), Postives = 62/120 (51.67%), Query Frame = 2
Query:  383 DVWEIDASLLKFEHKIVSGSYCDLYKGAFFSQDVAIKVLT-NEHLNENIRREFAQEVHIMRKVRHMNVVQFIGACTRPPRLFIVTEFMSGGSIYDYLHKQKCRLNLPLPTQVANDVSKGM 739
            D W ++   L    +I  G++ +++ G   + +  + V +  E L  +I+ +F QE  I+++  H N+V+ IG CT+   ++IV E + GG    +L  +  RL +    Q+  D + GM
Sbjct:  207 DKWVLNHEDLVLGEQIGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDIKAKFLQEAKILKQYSHPNIVRLIGVCTQKQPIYIVMELVQGGDFLTFLRTEGARLRMKTLLQMVGDAAAGM 326          

HSP 2 Score: 27.335 bits (59), Expect = 7.659e-12
Identity = 13/29 (44.83%), Postives = 16/29 (55.17%), Query Frame = 1
Query:  733 GNDYLHKNNKIHRDLEAANLLMNENGLRK 819
            G +YL     IHRDL A N L+ E  + K
Sbjct:  325 GMEYLESKCCIHRDLAARNCLVTEKNVLK 353          
BLAST of DY259877 vs. ExPASy Swiss-Prot
Match: FES_HUMAN (Proto-oncogene tyrosine-protein kinase Fes/Fps OS=Homo sapiens GN=FES PE=1 SV=3)

HSP 1 Score: 63.5438 bits (153), Expect = 1.271e-11
Identity = 32/120 (26.67%), Postives = 62/120 (51.67%), Query Frame = 2
Query:  383 DVWEIDASLLKFEHKIVSGSYCDLYKGAFFSQDVAIKVLT-NEHLNENIRREFAQEVHIMRKVRHMNVVQFIGACTRPPRLFIVTEFMSGGSIYDYLHKQKCRLNLPLPTQVANDVSKGM 739
            D W ++   L    +I  G++ +++ G   + +  + V +  E L  +++ +F QE  I+++  H N+V+ IG CT+   ++IV E + GG    +L  +  RL +    Q+  D + GM
Sbjct:  552 DKWVLNHEDLVLGEQIGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGVCTQKQPIYIVMELVQGGDFLTFLRTEGARLRVKTLLQMVGDAAAGM 671          

HSP 2 Score: 27.335 bits (59), Expect = 1.271e-11
Identity = 13/29 (44.83%), Postives = 16/29 (55.17%), Query Frame = 1
Query:  733 GNDYLHKNNKIHRDLEAANLLMNENGLRK 819
            G +YL     IHRDL A N L+ E  + K
Sbjct:  670 GMEYLESKCCIHRDLAARNCLVTEKNVLK 698          
BLAST of DY259877 vs. ExPASy Swiss-Prot
Match: KINY_DICDI (Probable serine/threonine-protein kinase kinY OS=Dictyostelium discoideum GN=kinY PE=2 SV=1)

HSP 1 Score: 65.855 bits (159), Expect = 1.284e-11
Identity = 41/130 (31.54%), Postives = 70/130 (53.85%), Query Frame = 2
Query:  392 EIDASLLKFEHKIVSGSYCDLYKGAFFSQDVAIKVLTNEHLNEN-IRREFAQEVHIMRKVRHMNVVQFIGACTRP---PRL----------FIVTEFMSGGSIYDYLHKQKCRLNLPLPTQVANDVSKGM 739
            +ID   LK    I SG+Y  +Y+G  F+ DVAIK + NE   +N   +   +EV +++ ++H N+VQFIG    P   P L          +IVTE++ GG++++ +   K    + L  +++ D++  M
Sbjct:   26 DIDIKDLKVGESIGSGAYGIVYRGTLFNSDVAIKKIQNEKSEKNEFIKYLKREVAVLKNIQHPNIVQFIGVYYEPLASPSLVNRLLNSSSTWIVTEYIGGGNLHERIKDTKKDFPIELRIKLSLDIALAM 155          

HSP 2 Score: 25.0238 bits (53), Expect = 1.284e-11
Identity = 9/22 (40.91%), Postives = 17/22 (77.27%), Query Frame = 1
Query:  742 YLHKNNKIHRDLEAANLLMNEN 807
            YLH  + I RDL++ N+L++++
Sbjct:  157 YLHSRDIIFRDLKSKNILIDDS 178          
BLAST of DY259877 vs. ExPASy Swiss-Prot
Match: FYN_XIPHE (Proto-oncogene tyrosine-protein kinase Fyn OS=Xiphophorus helleri GN=fyn PE=2 SV=3)

HSP 1 Score: 60.077 bits (144), Expect = 1.286e-11
Identity = 40/121 (33.06%), Postives = 66/121 (54.55%), Query Frame = 2
Query:  383 DVWEIDASLLKFEHKIVSGSYCDLYKGAFF-SQDVAIKVLTNEHLNENIRREFAQEVHIMRKVRHMNVVQFIGACTRPPRLFIVTEFMSGGSIYDYLHKQKCR-LNLPLPTQVANDVSKGM 739
            DVWEI    L+   ++ +G + +++ G +  +  VA+K L    ++      F +E  IM+K+RH  +VQ     +  P ++IVTE+MS GS+ D+L   + R L LP    +A  V+ GM
Sbjct:  262 DVWEIPRESLQLIKRLGNGQFGEVWMGTWNGTTKVAVKTLKPGTMSPE---SFLEEAQIMKKLRHDKLVQLYAVVSEEP-IYIVTEYMSKGSLLDFLKDGEGRALKLPNLVDMAAQVAAGM 378          

HSP 2 Score: 30.8018 bits (68), Expect = 1.286e-11
Identity = 12/25 (48.00%), Postives = 18/25 (72.00%), Query Frame = 1
Query:  733 GNDYLHKNNKIHRDLEAANLLMNEN 807
            G  Y+ + N IHRDL +AN+L+ +N
Sbjct:  377 GMAYIERMNYIHRDLRSANILVGDN 401          
The following BLAST results are available for this feature:
BLAST of DY259877 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 114
Match NameE-valueIdentityDescription
Y9963_DICDI7.452e-1228.26Probable serine/threonine-protein kinase DDB_G0272... [more]
FES_FELCA7.545e-1227.50Proto-oncogene tyrosine-protein kinase Fes/Fps OS=... [more]
FES_FSVGA7.606e-1227.50Tyrosine-protein kinase transforming protein Fes O... [more]
YES_CHICK7.632e-1233.06Tyrosine-protein kinase Yes OS=Gallus gallus GN=YE... [more]
SRC_RAT7.634e-1231.40Proto-oncogene tyrosine-protein kinase Src OS=Ratt... [more]
BLK_MOUSE7.649e-1231.40Tyrosine-protein kinase Blk OS=Mus musculus GN=Blk... [more]
FES_FSVST7.659e-1227.50Tyrosine-protein kinase transforming protein Fes O... [more]
FES_HUMAN1.271e-1126.67Proto-oncogene tyrosine-protein kinase Fes/Fps OS=... [more]
KINY_DICDI1.284e-1131.54Probable serine/threonine-protein kinase kinY OS=D... [more]
FYN_XIPHE1.286e-1133.06Proto-oncogene tyrosine-protein kinase Fyn OS=Xiph... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionKN0AAP10YH19FM1 Fruit-TF Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY259877 ID=DY259877; Name=DY259877; organism=Citrus clementina; type=EST; length=981bp
GAGGATGTTCTAATGTTCAAAAGGTTGCTGCACGTGGCACGTGATCCTGC
CGCTACACCAGCAATTGAAGTCCGACTTGTGCTGGCTTATGCATGAAATT
ACAATCTCAACCAATGACAAGCCAAAGCTCCTCAGTCAGTTGACTTCTTT
ACTGTCCGAGATTGGGTTAAACATTCAAGAAGCACATGCATTTTCCACTG
TAGATGGCTACTCATTGGATGTGTTTGTTGTTGATGGTTGGCCACTTCAG
GAGACTGAACAGTTAAGAAATGTGCTGGCAAAGGAAATTCCCAAGGTTGA
GAATCATCATCATGTTGTATATCCTGTTGGGGAGCAAGAACAAAGTGGAA
TCAATCATGTAAACATACCAGCTGAAGGAATAGATGTTTGGGAAATTGAT
GCTAGCTTGCTGAAATTTGAACATAAAATTGTATCTGGATCCTATTGTGA
TTTGTATAAAGGTGCTTTCTTTAGTCAAGATGTGGCTATTAAAGTTCTTA
CTAATGAACATCTAAACGAGAATATACGGAGGGAGTTTGCACAAGAAGTT
CATATTATGAGGAAAGTTCGGCACATGAATGTCGTTCAATTCATTGGTGC
ATGTACTAGACCTCCAAGGCTGTTCATTGTGACTGAATTTATGTCTGGTG
GAAGCATCTATGACTACCTGCATAAACAAAAGTGCCGTTTAAACCTTCCT
TTGCCTACTCAAGTTGCCAATGATGTTTCCAAGGGAATGATTACTTGCAC
AAAAACAATAAAATCCATAGGGACCTGGAAGCGGCCAATCTTTTGATGAA
TGAAAATGGATTAAGAAAATTCCAAATTCCCCCGTTAACCTTATAAATTT
TTGGCGAAAACCCCAGGTTACCTGGGAATTTTTTCCCGGAATTTTAGGGA
AACCTTGATTTTCCCACCACCAATTCCCAAAACTAAAAGATAATAATAAG
GATATGCTCTCCCGCCCCACGGAGAAGTAGC
back to top