DY259879

Overview
NameDY259879
Unique NameDY259879
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length915
Libraries
Library NameType
Fruit-TFcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of DY259879 vs. ExPASy Swiss-Prot
Match: APX3_ORYSI (Probable L-ascorbate peroxidase 3 OS=Oryza sativa subsp. indica GN=APX3 PE=2 SV=1)

HSP 1 Score: 78.1814 bits (191), Expect = 7.402e-14
Identity = 39/76 (51.32%), Postives = 47/76 (61.84%), Query Frame = 2 
Query:   20 FEGPWTRNPLIFDNSYFTELLTGFKDGLLQLPSDKALLDDPVFRPLVEKXXXXXXXXXXXXXXXHLKLSELGFAEP 247
            F+G WT++PL FDNSYF ELL    +GLL+LP+DKAL++DP FR  VE                H KLSELGF  P
Sbjct:  173 FDGAWTKDPLKFDNSYFIELLKENSEGLLKLPTDKALVEDPTFRRYVELYAKDEDAFFRDYAESHKKLSELGFTPP 248
The following BLAST results are available for this feature:
BLAST of DY259879 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 11
Match NameE-valueIdentityDescription
APX3_ORYSI7.402e-1451.32Probable L-ascorbate peroxidase 3 OS=Oryza sativa ... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAP10YH21FM1 Fruit-TF Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY259879 ID=DY259879; Name=DY259879; organism=Citrus clementina; type=EST; length=915bp
CCACAAGGAGACGTTTTGATTTGAGGGACCATGGACCCGCAACCCTCTCA
TTTTTGACAATTCCTACTTCACGGAGCTCTTGACTGGTTTTAAGGATGGT
CTTCTGCAATTGCCATCCGACAAGGCCCTTCTGGATGACCCTGTTTTCCG
CCCTCTTGTTGAGAAATATGCTGCGGATGAGGACGCTTTCTTCGCTGATT
ATGCTGAGGCTCATCTCAAGCTCTCTGAGCTAGGATTTGCTGAACCCTAA
ATTTACCCGAGTAAATAAATGGTTGGAATGATCGCCAACAACAGTGTGCC
TCTATTTTATGTTTTTTTAATTCTCACACAATTCGAATTTCAAGATGTTG
TCGGTGTAATTCCGTGCCCACGCTTCCTTGCTCTTCTGCATTCTTCTATC
TTCACACTCACCTCCCCCCACCCCCCATCACCCATTAACTGAGTCATTAC
CCCTAGTAATCCACCCCTACACCCCTCTCACACTCAACTGTCCCTAATCG
ATCTGAGCCTGAATCTATCCGTTATTTCCTCCCATCCCATCTCCACCCCT
CCCTCATGATCCCCCTCCTTCCTTCTTCTCTAACTTCCTCTCCCCCCCCC
TCACCTCCCATCAACCTCCTCCTTCTCCACCTCCCCCTCTGCCCTCCTCT
CCACTTCCCCACCCGCGCCGTGTTCGACTCTCCTACAACAAACACACTTC
ACCCACCACCCCAACCCACCGCCCCCTCCATCCCCTTCTCCCTCGACCCC
TCATACACCTCCTAAAACTACATCACATATATACTAATACTCACTCTCCC
CCAGACGTAATCTCAGGCCTACAGATAATGCTTTCACCCCCACCCTCCCC
CCCCACCTCACCCTCGCTGCTACCTCTCCGCTATTTGCTACCCACCTTCT
CCCCCTGACATTCCT
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