DY259904

Overview
NameDY259904
Unique NameDY259904
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length923
Libraries
Library NameType
Fruit-TFcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig865 contig Ccv1_Contig865:20..940. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of DY259904 vs. ExPASy Swiss-Prot
Match: LDOX_PETHY (Leucoanthocyanidin dioxygenase OS=Petunia hybrida GN=ANT17 PE=2 SV=1)

HSP 1 Score: 92.4337 bits (228), Expect = 3.817e-18
Identity = 68/264 (25.76%), Postives = 122/264 (46.21%), Query Frame = 3
Query:   81 PVISLENINGAERAAILEK---INEACENWGFFELVNHGIEPEFMDTVERLTKAHYRKCMEQRFKEL--VASRALEGIQTEV-----NDMDWESTFYVRHLPQST--INEVPDLDEEYRKVMXXXXXXXXXXXXXXXXXXXXXXXXXXGYLKKVFHGANGPTFGTKVSNYPPCPKPDLIKGLRAHTDAGGIILLFQDDKVSGLQLLKDGQWIDVPPLRHSIVVNLGDQIEVITHGKLQSVEPRVISQTDGEGRMSLASFHHPGK 836
            P I L+ I+  ++  I EK   + +A   WG   LVNHGI  E ++ V+   +  + + +E++ K     A+  ++G  +++       ++WE  F+    P+    ++  P    +Y                              G L+K   G        K++ YP CP+P+L  G+ AHTD   +  +  +  V GLQL  +GQW+    + +SI++++GD IE++++GK +S+  R +   + + R S A F  P K
Sbjct:   53 PTIDLKEIDSEDKE-IREKCHQLKKAAMEWGVMHLVNHGISDELINRVKVAGETFFDQPVEEKEKYANDQANGNVQGYGSKLANSACGQLEWEDYFFHCAFPEDKRDLSIWPKNPTDYTPATSEYAKQIRALATKILTVLSIGLGLEEGRLEKEVGGMEDLLLQMKINYYPKCPQPELALGVEAHTDVSALTFILHN-MVPGLQLFYEGQWVTAKCVPNSIIMHIGDTIEILSNGKYKSILHRGVVNKE-KVRFSWAIFCEPPK 313          
BLAST of DY259904 vs. ExPASy Swiss-Prot
Match: LDOX_VITVI (Leucoanthocyanidin dioxygenase OS=Vitis vinifera PE=2 SV=1)

HSP 1 Score: 92.0485 bits (227), Expect = 4.985e-18
Identity = 69/282 (24.47%), Postives = 124/282 (43.97%), Query Frame = 3
Query:   81 PVISLENINGAE-------RAAILEKINEACENWGFFELVNHGIEPEFMDTVERLTKAHYRKCMEQRFKEL--VASRALEGIQTEV-----NDMDWESTFYVRHLPQSTINEV--PDLDEEYRKVMXXXXXXXXXXXXXXXXXXXXXXXXXXGYLKKVFHGANGPTFGTKVSNYPPCPKPDLIKGLRAHTDAGGIILLFQDDKVSGLQLLKDGQWIDVPPLRHSIVVNLGDQIEVITHGKLQSVEPRVISQTDGEGRMSLASFHHPGK*CRDLSRTPHCLKK 878
            P I L++I   +       R    E++ +A   WG   LVNHGI  + ++ V+   +  +   ME++ K     AS  + G  +++       ++WE  F+    P+   +    P    +Y                              G L+K   G        K++ YP CP+P+L  G+ AHTD   +  +  +  V GLQL  +G+W+    + +SI++++GD IE++++GK +S+  R +   + + R+S A F  P K    +    HC ++
Sbjct:   50 PTIDLKDIESEDEVVRREIRERCREELKKAAMEWGVMHLVNHGISDDLINRVKVAGETFFNLPMEEKEKYANDQASGKIAGYGSKLANNASGQLEWEDYFFHLIFPEDKRDMTIWPKTPSDYVPATCEYSVKLRSLATKILSVLSLGLGLEEGRLEKEVGGMEELLLQKKINYYPKCPQPELALGVEAHTDVSALTFILHN-MVPGLQLFYEGKWVTAKCVPNSIIMHIGDTIEILSNGKYKSILHRGLVNKE-KVRISWAVFCEPPK--EKIILKAHCQRR 327          
BLAST of DY259904 vs. ExPASy Swiss-Prot
Match: LDOX_PERFR (Leucoanthocyanidin dioxygenase OS=Perilla frutescens GN=ANS PE=2 SV=1)

HSP 1 Score: 92.0485 bits (227), Expect = 4.985e-18
Identity = 66/276 (23.91%), Postives = 127/276 (46.01%), Query Frame = 3
Query:   45 LLKKEFRDMENFPVISLENINGAE---RAAILEKINEACENWGFFELVNHGIEPEFMDTVERLTKAHYRKCMEQR--FKELVASRALEGIQTEV-----NDMDWESTFYVRHLPQ--STINEVPDLDEEYRKVMXXXXXXXXXXXXXXXXXXXXXXXXXXGYLKKVFHGANGPTFGTKVSNYPPCPKPDLIKGLRAHTDAGGIILLFQDDKVSGLQLLKDGQWIDVPPLRHSIVVNLGDQIEVITHGKLQSVEPRVISQTDGEGRMSLASFHHPGK 836
            L +++  +    P I LE ++  +   R    E++ +A  +WG   L+NHGI  E +D V+   K  +   +E++  +    A+  ++G  +++       ++WE  F+    P+  + ++  P    +Y                              G L+K   GA       K++ YP CP+P+L  G  AHTD   +  +  +  V GLQL  + +W+    + +SI++++GD +E++++GK +S+  R +   + + R+S A F  P K
Sbjct:   42 LAEEKSSEGPQLPTIDLEEMDSRDEEGRKKCHEELKKAATDWGVMHLINHGIPEELIDRVKAAGKEFFELPVEEKEAYANDQAAGNVQGYGSKLANNASGQLEWEDYFFHCVYPEHKTDLSIWPTKPPDYIPATSEYAKQLRALATKILSVLSIGLGLEKGRLEKEVGGAEDLIVQMKINFYPKCPQPELALGWEAHTDVSALTFILHN-MVPGLQLFYEDKWVTAKCVPNSIIMHIGDTLEILSNGKYKSILHRGLVNKE-KVRISWAVFCEPPK 315          
BLAST of DY259904 vs. ExPASy Swiss-Prot
Match: DV4H_CATRO (Deacetoxyvindoline 4-hydroxylase OS=Catharanthus roseus GN=D4H PE=1 SV=2)

HSP 1 Score: 92.0485 bits (227), Expect = 4.985e-18
Identity = 76/263 (28.90%), Postives = 127/263 (48.29%), Query Frame = 3
Query:   81 PVISLENI--NGAERAAILEKINEACENWGFFELVNHGIEPE-----------FMDTVERLTKAHYRKCMEQRFKE--LVASR--ALEGIQTEVNDMDWESTFY-VRHLPQSTINEVPDLDEEYRKVMXXXXXXXXXXXXXXXXXXXXXXXXXXGYLKKVFHGANGPTFGTKVSNYPPCPKPDLIKGLRAHTDAGGIILLFQDDKVSGLQLLKDGQWIDVPPLRHSIVVNLGDQIEVITHGKLQSVEPRVISQTDGEGRMSLA 815
            PVI+L  +  N   R  I+EKI EA E +GFF++VNHGI  +           F +  +++ + +Y +    RF +  L +S    + GI       +W  T   + +  Q    E PD+    R ++                           +L+++         G     YP CP+P+L  G   H+D+G + +L QD ++ GLQ+L + QWIDVP +  ++V+N+ D +++IT+ K +SVE RV++   G  R+S+A
Sbjct:   92 PVINLNGLSSNSEIRREIVEKIGEASEKYGFFQIVNHGIPQDVMDKMVDGVRKFHEQDDQIKRQYYSR---DRFNKNFLYSSNYVLIPGIAC-----NWRDTMECIMNSNQPDPQEFPDV---CRDILMKYSNYVRNLGLILFELLSEALGLKPNHLEEMDCAEGLILLG---HYYPACPQPELTFGTSKHSDSGFLTILMQD-QIGGLQILLENQWIDVPFIPGALVINIADLLQLITNDKFKSVEHRVLANKVGP-RISVA 338          
BLAST of DY259904 vs. ExPASy Swiss-Prot
Match: G3OX1_ARATH (Gibberellin 3-beta-dioxygenase 1 OS=Arabidopsis thaliana GN=GA4 PE=1 SV=2)

HSP 1 Score: 88.9669 bits (219), Expect = 4.220e-17
Identity = 68/268 (25.37%), Postives = 120/268 (44.78%), Query Frame = 3
Query:   72 ENFPVISLENINGAERAAILEKINEACENWGFFELVNHGIEPEFMDTVERLTKAHYRKCMEQRFKELVASRALEG-----IQTEVNDMDWESTFYVRHLPQSTINEV--------PDLDEEYRKVMXXXXXXXXXXXXXXXXXXXXXXXXXXGYLKKVFHGANGPTFGTKVSNYPPCPKPDLIKGLRAHTDAGGIILLFQDDKVSGLQLLKDG-QWIDVPPLRHSIVVNLGDQIEVITHGKLQSVEPRV-ISQTDGEGRMSLASFHHP 830
            EN P+I L++ +   +      I  AC  WG F++ NHG+    +  +E LT + +   ++++ K   +   + G     I +  N   W   F +   P +   ++         D+ EEY + M                               +    N      ++++YP CP+PD   GL AHTD+  + +L+Q++  +GLQ+ +D   W+ VPP   S+VVN+GD   ++++G  +SV  R  ++QT    R+S+A    P
Sbjct:   55 ENIPLIDLDHPDATNQ------IGHACRTWGAFQISNHGVPLGLLQDIEFLTGSLFGLPVQRKLKSARSETGVSGYGVARIASFFNKQMWSEGFTITGSPLNDFRKLWPQHHLNYCDIVEEYEEHMKKLASKLMWLALNSLGVSEEDIEWA-----SLSSDLNWAQAALQLNHYPVCPEPDRAMGLAAHTDSTLLTILYQNN-TAGLQVFRDDLGWVTVPPFPGSLVVNVGDLFHILSNGLFKSVLHRARVNQT--RARLSVAFLWGP 308          
BLAST of DY259904 vs. ExPASy Swiss-Prot
Match: G2OX7_ARATH (Gibberellin 2-beta-dioxygenase 7 OS=Arabidopsis thaliana GN=GA2OX7 PE=1 SV=1)

HSP 1 Score: 87.8113 bits (216), Expect = 9.402e-17
Identity = 67/257 (26.07%), Postives = 116/257 (45.14%), Query Frame = 3
Query:   81 PVISLENINGAE---RAAILEKINEACENWGFFELVNHGIEPEFMDTV----ERLTKAHYRKCMEQRFKELVASRALEGIQTEVNDMDWESTFYVRHLPQSTINEVPDLDEEYRKVMXXXXXXXXXXXXXXXXXXXXXXXXXXGYLKKVFHGANGPTFGTKVSNYPPCPKPDLIKGLRAHTDAGGIILLFQDDKVSGLQLLKDGQWIDVPPLRHSIVVNLGDQIEVITHGKLQSVEPRVISQTDGEGRMSLASFHHP 830
            PVI L ++   E   R   ++++  A + WGFF++VNHGI  +  + +    ++L    +   + +RF +L  +    G  +  +   + S     H+  S ++ + D     R ++                           Y + +F   N      +++ Y P      + GL  HTD   + +L QD ++ GL+L  +GQWI V P   ++ VN+GD  + +++G  QSV  RVIS  + E RMS+A F  P
Sbjct:   41 PVIDLSHLTSGEEVKRKRCVKQMVAAAKEWGFFQIVNHGIPKDVFEMMLLEEKKLFDQPFSVKVRERFSDLSKNSYRWGNPSATSPAQY-SVSEAFHIILSEVSRISDDRNNLRTIVETYVQEIARVAQMICEILGKQVNVSSEYFENIFELENS---FLRLNKYHPSVFGSEVFGLVPHTDTSFLTILSQD-QIGGLELENNGQWISVKPCLEALTVNIGDMFQALSNGVYQSVRHRVISPANIE-RMSIAFFVCP 291          
BLAST of DY259904 vs. ExPASy Swiss-Prot
Match: FLS_MATIN (Flavonol synthase/flavanone 3-hydroxylase (Fragment) OS=Matthiola incana PE=2 SV=1)

HSP 1 Score: 87.8113 bits (216), Expect = 9.402e-17
Identity = 60/241 (24.90%), Postives = 113/241 (46.89%), Query Frame = 3
Query:   87 ISLENINGAERAAILEKINEACENWGFFELVNHGIEPEFMDTVER-------LTKAHYRKCMEQRFKELVASRALE-------GIQTEVNDMDWE-STFYVRHLPQSTINEVPDLDEEYRKVMXXXXXXXXXXXXXXXXXXXXXXXXXXGYLKKVFHGANGPTFGTKVSNYPPCPKPDLIKGLRAHTDAGGIILLFQDDKVSGLQLLKDGQWIDVPPLRHSIVVNLGDQIEVITHGKLQSV 764
            + + +++  +   +   + +A E+WG F++VNHGI  E +  +++       L +A  R C  +        R +E       GI  ++    W  S+   R+ P+S   +  +++EEY + +                          G  ++     NG  +   +++YPP P  D   GL  HTD  G+ L+  ++ + GLQ+ KD  WI+V  +  +I+VN+GDQI ++++GK ++V
Sbjct:    2 VPVVDLSCPDEELVARTVVKASEDWGVFQVVNHGIPTELIQRLQKVGREFFELPEAEKRSCAREAGSVEGYGRRIELDIKKRKGIVDQIYLSTWPPSSVNYRYWPKSP-PDYREVNEEYARHVKTLSEKIMEWLSEGL-----------GLGREAIKEVNGCWYVMNINHYPPYPHSDSFNGLEPHTDINGLTLIITNE-IPGLQVFKDDHWIEVEYIPSAIIVNIGDQIMMLSNGKYKNV 229          
BLAST of DY259904 vs. ExPASy Swiss-Prot
Match: ACCH1_ARATH (1-aminocyclopropane-1-carboxylate oxidase homolog 1 OS=Arabidopsis thaliana GN=At1g06620 PE=2 SV=1)

HSP 1 Score: 86.6557 bits (213), Expect = 2.095e-16
Identity = 43/90 (47.78%), Postives = 62/90 (68.89%), Query Frame = 3
Query:  552 YPPCPKPDLIKGLRAHTDAGGIILLFQDDKVSGLQLLKDGQWIDVPPLRHSIVVNLGDQIEVITHGKLQSVEPRVISQTDGEGRMSLASF 821
            YPPCP+PDL  GL  H+D   + +L QD  + GLQ+L D  W+DVPP+  ++VVN+GD +++IT+ K  SVE RV++   G  R+S+A F
Sbjct:  223 YPPCPQPDLTLGLTKHSDNSFLTILLQDH-IGGLQVLHDQYWVDVPPVPGALVVNVGDLLQLITNDKFISVEHRVLANVAGP-RISVACF 310          
BLAST of DY259904 vs. ExPASy Swiss-Prot
Match: GSL_ARATH (Probable 2-oxoacid dependent dioxygenase OS=Arabidopsis thaliana GN=GSL-OH PE=2 SV=1)

HSP 1 Score: 86.2705 bits (212), Expect = 2.735e-16
Identity = 64/241 (26.56%), Postives = 107/241 (44.40%), Query Frame = 3
Query:  117 RAAILEKINEACENWGFFELVNHGIEPEFMDT-VERLTKAH-----YRKCMEQRFKELVASRALEGIQTEVNDMDWESTFYVRHLPQSTINEVPDLDEEYRKVMXXXXXXXXXXXXXXXXXXXXXXXXXXGYLKKVFHGANGPTFGTKVSNYPPCPKPDLIKGLRAHTDAGGIILLFQDDKVSGLQLLKDGQWIDVPPLRHSIVVNLGDQIEVITHGKLQSVEPRVISQTDGEGRMSLASF 821
            R +++ K+ +A E +GFF+ +NHG+  + M+  +  + + H      RK    R K             E     W  T      P   + +  DL E   ++M                           +LK++   A G         +PPCP+P+   G   HTD   + +L  D+   GLQ+L DG WIDVPP   +++ N+GD +++I++ K  S+E R+++    E R+S+A F
Sbjct:   70 RESVVAKVKDAMEKFGFFQAINHGVPLDVMEKMINGIRRFHDQDPEVRKMFYTRDKTKKLKYHSNADLYESPAASWRDTLSCVMAPD--VPKAQDLPEVCGEIMLEYSKEVMKLAELMFEILSEALGLSPNHLKEM-DCAKG--LWMLCHCFPPCPEPNRTFGGAQHTDRSFLTILLNDNN-GGLQVLYDGYWIDVPPNPEALIFNVGDFLQLISNDKFVSMEHRILANGGEEPRISVACF 304          
BLAST of DY259904 vs. ExPASy Swiss-Prot
Match: IDS3_HORVU (2'-deoxymugineic-acid 2'-dioxygenase OS=Hordeum vulgare GN=IDS3 PE=1 SV=3)

HSP 1 Score: 81.2629 bits (199), Expect = 8.800e-15
Identity = 72/265 (27.17%), Postives = 111/265 (41.89%), Query Frame = 3
Query:   84 VISLENIN-GAERAAILEKINEACENWGFFELVNHGIEPEFMDTVERLTKAHYRK--------CMEQRFKELVASRALEGIQTEVNDMDWESTFYVRHLP---QSTINEVPDLDEEYRKVMXXXXXXXXXXXXXXXXXXXXXXXXXXGYLKKVFHGANGPTFGTKVSNYPPCPKPDLIKGLRAHTDAGGIILLFQDDKVSGLQLLKDGQWIDVPPLRHSIVVNLGDQIEVITHGKLQSVEPRVISQTDGEGRMSLASFHHPGK*C 842
            V+SL  I+    R  +   I EA +  GFF++VNHG+  + M  +E + +  +            E+R K    +R   G   +     +         P     +INE PD  +  R V+                           Y +    G N       +++YP CP PD   G   H D   I LL     V+GL++   G WI V P  ++ VVN G Q+EV+T+G L+S+E R ++ +    R S+A+F  P + C
Sbjct:   32 VVSLPIIDLSCGRDEVRRSILEAGKELGFFQVVNHGVSKQVMRDMEGMCEQFFHLPAADKASLYSEERHKP---NRLFSGATYDTGGEKYWRDCLRLACPFPVDDSINEWPDTPKGLRDVIEKFTSQTRDVGKELLRLLCEGMGIQADYFEGDLSGGN---VILNINHYPSCPNPDKALGQPPHCDRNLITLLLPG-AVNGLEVSYKGDWIKVDPAPNAFVVNFGQQLEVVTNGLLKSIEHRAMTNS-ALARTSVATFIMPTQEC 288          
The following BLAST results are available for this feature:
BLAST of DY259904 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 65
Match NameE-valueIdentityDescription
LDOX_PETHY3.817e-1825.76Leucoanthocyanidin dioxygenase OS=Petunia hybrida ... [more]
LDOX_VITVI4.985e-1824.47Leucoanthocyanidin dioxygenase OS=Vitis vinifera P... [more]
LDOX_PERFR4.985e-1823.91Leucoanthocyanidin dioxygenase OS=Perilla frutesce... [more]
DV4H_CATRO4.985e-1828.90Deacetoxyvindoline 4-hydroxylase OS=Catharanthus r... [more]
G3OX1_ARATH4.220e-1725.37Gibberellin 3-beta-dioxygenase 1 OS=Arabidopsis th... [more]
G2OX7_ARATH9.402e-1726.07Gibberellin 2-beta-dioxygenase 7 OS=Arabidopsis th... [more]
FLS_MATIN9.402e-1724.90Flavonol synthase/flavanone 3-hydroxylase (Fragmen... [more]
ACCH1_ARATH2.095e-1647.781-aminocyclopropane-1-carboxylate oxidase homolog ... [more]
GSL_ARATH2.735e-1626.56Probable 2-oxoacid dependent dioxygenase OS=Arabid... [more]
IDS3_HORVU8.800e-1527.172'-deoxymugineic-acid 2'-dioxygenase OS=Hordeum vu... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAP10YJ05FM1 Fruit-TF Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY259904 ID=DY259904; Name=DY259904; organism=Citrus clementina; type=EST; length=923bp
CTCACAAACACATACACAAACACAAACACTCACAAACACACAGCTTGTTA
AAGAAAGAATTCAGAGATATGGAGAACTTCCCCGTTATCAGCTTGGAGAA
CATCAATGGTGCTGAAAGAGCGGCTATCTTGGAGAAGATCAACGAGGCCT
GTGAGAACTGGGGCTTCTTTGAGCTGGTGAATCATGGAATTGAGCCGGAG
TTTATGGACACAGTGGAGAGATTGACCAAGGCGCATTACAGAAAATGTAT
GGAGCAAAGATTCAAGGAGCTTGTTGCAAGCAGGGCACTTGAAGGTATCC
AAACCGAGGTCAATGACATGGACTGGGAAAGCACTTTCTATGTGCGTCAC
CTCCCTCAGTCGACCATCAATGAAGTCCCAGATCTTGATGAGGAATACAG
GAAGGTGATGAAGGAATTTGCATTGAAATTGGAGAAATTAGCAGAGGAGC
TATTGGACTTGTTATGCGAGAATCTTGGATTAGAGAAGGGGTACTTGAAA
AAGGTCTTTCATGGGGCAAACGGACCAACCTTTGGTACCAAAGTTAGCAA
CTACCCACCATGCCCCAAGCCAGATTTGATCAAGGGTCTCCGGGCTCACA
CCGACGCCGGCGGCATCATCTTGCTCTTCCAGGATGACAAAGTCAGTGGC
CTTCAGCTTCTTAAAGATGGCCAGTGGATTGATGTGCCCCCCTTGCGCCA
CTCCATTGTTGTCAACCTCGGTGACCAAATTGAGGTGATCACCCATGGAA
AGTTACAGAGTGTGGAGCCCAGAGTGATTTCCCAAACCGACGGCGAGGGC
CGGATGTCCCTAGCTTCCTTTCACCATCCCGGGAAGTGATGCCGTGATCT
ATCCCGCACCCCGCATTGCCTGAAAAAGAAGCCGAAAAGAAACAAGTGTA
CCCAAAATTTGTTTTTGGGGACC
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