DY259912

Overview
NameDY259912
Unique NameDY259912
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length993
Libraries
Library NameType
Fruit-TFcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY259912 vs. ExPASy Swiss-Prot
Match: COMT1_ROSCH (Caffeic acid 3-O-methyltransferase OS=Rosa chinensis GN=COMT1 PE=2 SV=1)

HSP 1 Score: 144.436 bits (363), Expect = 9.489e-34
Identity = 93/255 (36.47%), Postives = 136/255 (53.33%), Query Frame = 2
Query:   74 QAQVWQLMLAFAD--SMA*KSAVELRLADIMHCHGSPITLP--QLASGINSSCPDVHIIPSLTRIMRMLVRKGV--FAAHRSSDGSEETMYGLTQISKWLLRDSE-MSLAPMILFQNSQLLQAPWHHLSQCVQEGGNAFKKAHGCEMWDFAXXXXXXXXXXXKAMACTAKIVMSTLLSHYKDGFDGIRSLVDVGGGTGEELAEIVEFHPHIKGVNFDLPHVVCPTPVYEGVSHVGSDMA*RGSYC*CIFKKWILH 817
            +A ++ + LA A    M  K+A+EL L +IM   G    L    LAS + +  P+  ++  L R++R+L    +  ++     DG  E +YGL  + K+L ++ + +S+A + L    ++L   W+HL   V +GG  F KA+G   +D+            K MA  + I M  +L  YK GF+G+ S+VDVGGGTG  +  IV  +P IKG+NFDLPHV+   P Y GV HVG DM         IF KWI H
Sbjct:   18 EANLFAMQLASASVLPMVLKAAIELDLLEIMAKAGPGAFLSPNDLASQLPTKNPEAPVM--LDRMLRLLASYSILTYSLRTLPDGKVERLYGLGPVCKFLTKNEDGVSIAALCLMNQDKVLVESWYHLKDAVLDGGIPFNKAYGMTAFDYHGTDPRFNKVFNKGMADHSTITMKKILETYK-GFEGLTSIVDVGGGTGAVVNMIVSKYPSIKGINFDLPHVIEDAPQYPGVQHVGGDMFVSVPKGDAIFMKWICH 269          
BLAST of DY259912 vs. ExPASy Swiss-Prot
Match: 6OMT_COPJA ((RS)-norcoclaurine 6-O-methyltransferase OS=Coptis japonica PE=1 SV=1)

HSP 1 Score: 144.436 bits (363), Expect = 9.489e-34
Identity = 99/300 (33.00%), Postives = 155/300 (51.67%), Query Frame = 2
Query:   47 DVREDVLRGQAQVWQLMLAFADSMA*KSAVELRLADIMHCHGSPITLPQLASGINSSCPDVHIIPSLTRIMRMLVRKGVFAAHRSSDGSEETMYGLTQISKWLLRDSEMSLAPMILFQNSQLLQAPWHHLSQCVQ-EGGNAFKKAHGCEMWDFAXXXXXXXXXXXKAMACTAKIVMSTLLSHYKDGFDGIRSLVDVGGGTGEELAEIVEFHPHIKGVNFDLPHVVCPTPVYEGVSHVGSDMA*RGSYC*CIFKKWILHGLGMTTPVSGF*KPAKKPIPEETGKAWVFLNSLVKQNEKHVF 943
            +V++D L  QA++W  +  FA+S+  K AV+L LA+I+H  G+ +TL +L+S + S   +     +L R+MR LV   +F    S DG  E  YGL   +K+L++  +  +   IL    +   APWH+L   +  E G AF+KA G  +W +            +AMA  ++++MS L+    + F+GI +LVDVGGGTG  +  I    PHIK   +DLPHV+  +P Y  V  V  DM         I  K ILH       +    K  K+ +P + GK  + ++ ++    +H +
Sbjct:    2 EVKKDNLSSQAKLWNFIYGFAESLVLKCAVQLDLANIIHNSGTSMTLSELSSRLPSQPVNED---ALYRVMRYLVHMKLFTK-ASIDG--ELRYGLAPPAKYLVKGWDKCMVGSILAITDKDFMAPWHYLKDGLSGESGTAFEKALGTNIWGYMAEHPEKNQLFNEAMANDSRLIMSALVKECGNIFNGITTLVDVGGGTGTAVRNIANAFPHIKCTVYDLPHVIADSPGYSEVHCVAGDMFKFIPKADAIMMKCILHDWDDKECIE-ILKRCKEAVPVKGGKV-IIVDIVLNVQSEHPY 293          
BLAST of DY259912 vs. ExPASy Swiss-Prot
Match: COMT1_CLABR (Caffeic acid 3-O-methyltransferase OS=Clarkia breweri GN=COMT PE=1 SV=1)

HSP 1 Score: 143.665 bits (361), Expect = 1.619e-33
Identity = 87/258 (33.72%), Postives = 139/258 (53.88%), Query Frame = 2
Query:   74 QAQVWQLMLAFAD--SMA*KSAVELRLADIM-----HCHGSPITLPQLASGINSSCPDVHIIPSLTRIMRMLVRKGVFAA--HRSSDGSEETMYGLTQISKWLLRDSE-MSLAPMILFQNSQLLQAPWHHLSQCVQEGGNAFKKAHGCEMWDFAXXXXXXXXXXXKAMACTAKIVMSTLLSHYKDGFDGIRSLVDVGGGTGEELAEIVEFHPHIKGVNFDLPHVVCPTPVYEGVSHVGSDMA*RGSYC*CIFKKWILH 817
            +A ++ + LA A    M  K+A+EL + +IM     H  G+ I+  ++A+ + ++ PD  ++  L R++R+L    V         DG  E +YGL  + K+L ++ + +SLAP+ L    ++L   W++L   + +GG  F KA+G   +++            + M+  + I M  +   Y  GF+ + ++VDVGGGTG  L+ IV  +P IKG+NFDLPHV+   P+Y GV HVG DM         IF KWI H
Sbjct:   20 EANLFAMQLASASVLPMVLKAAIELDVLEIMAKSIPHGSGAYISPAEIAAQLPTTNPDAPVM--LDRVLRLLASYSVVTCSLRELPDGKVERLYGLAPVCKFLTKNEDGVSLAPLCLMNQDKVLMESWYYLKDAILDGGIPFNKAYGMTAFEYHGTDPRFNKVFNRGMSDHSTITMKKIFEMYT-GFEALNTIVDVGGGTGAVLSMIVAKYPSIKGINFDLPHVIEDAPIYPGVEHVGGDMFVSVPKGDAIFMKWICH 274          
BLAST of DY259912 vs. ExPASy Swiss-Prot
Match: EOMT1_OCIBA (Eugenol O-methyltransferase OS=Ocimum basilicum GN=EOMT1 PE=1 SV=1)

HSP 1 Score: 142.895 bits (359), Expect = 2.761e-33
Identity = 82/239 (34.31%), Postives = 124/239 (51.88%), Query Frame = 2
Query:   56 EDVLRGQAQVWQLMLAFADSMA*KSAVELRLADIMHCHGSPITLPQLASGINSSCPDVHIIPSLTRIMRMLVRKGVFAAHRSSDGSEETMYGLTQISKWLLRDSEMSLAPMILFQNSQLLQAPWHHLSQCVQEGGNA--FKKAHGCEMWDFAXXXXXXXXXXXKAMACTAKIVMSTLLSHYKDGFDGIRSLVDVGGGTGEELAEIVEFHPHIKGVNFDLPHVVCPTPVYEGVSHVGSDM 766
            E +L+ Q  VW  M AFA+SM+ K A++L + DI+H HG P+TL QL   I  +           R+MR LV    F    +S+ ++E  Y LT  S  LL+++ +++ P++          PWHH+S+      +A  F+ A+GC  W+             +AM+C ++++       YK   +GIR+LVDVGGG G     IVE  P IK    DLPHVV      + ++++G DM
Sbjct:   13 EQLLQAQVHVWNHMYAFANSMSLKCAIQLGIPDILHKHGRPMTLSQLLQSIPINKEKTQCFQ---RLMRALVNSNFFIEENNSN-NQEVCYWLTPASCLLLKEAPLTVTPLVQVVLDPTFTNPWHHMSEWFTHEKHATQFEAANGCTFWEKLANEPSKGRFFDEAMSCDSRLIAHVFTKDYKHVIEGIRTLVDVGGGNGTMAKAIVEAMPTIKCTVIDLPHVVAGLESTDNLNYIGGDM 247          
BLAST of DY259912 vs. ExPASy Swiss-Prot
Match: IMT1_MESCR (Inositol 4-methyltransferase OS=Mesembryanthemum crystallinum GN=IMT1 PE=1 SV=1)

HSP 1 Score: 142.124 bits (357), Expect = 4.709e-33
Identity = 83/243 (34.16%), Postives = 129/243 (53.09%), Query Frame = 2
Query:  101 AFADSMA*KSAVELRLADIMHCHGSPI--TLPQLASGINSSCPDVHIIPSLTRIMRMLVRKGVFAAH-RSSDGSEETMYGLTQISKWLL-RDSEMSLAPMILFQNSQLLQAPWHHLSQCVQEGGNAFKKAHGCEMWDFAXXXXXXXXXXXKAMACTAKIVMSTLLSHYKDGFDGIRSLVDVGGGTGEELAEIVEFHPHIKGVNFDLPHVVCPTPVYEGVSHVGSDMA*RGSYC*CIFKKWILH 817
            A A  M  KSA EL++ DI    G  +  +  ++AS I +  P+  ++  L R++R+L    V     +  +G  + +YG   +  +L   D + SL P+++  + +++   W HL+  + EGG  FK+AHG   +D+            + MA    +VM  LL +Y +GF+ ++ LVDVGG  G  ++ IV  H HIKG+N+DLPHV+   P Y GV HVG +M         IF KW+LH
Sbjct:   31 AAAFPMILKSAFELKILDIFSKAGEGVFVSTSEIASQIGAKNPNAPVL--LDRMLRLLASHSVLTCKLQKGEGGSQRVYGPAPLCNYLASNDGQGSLGPLLVLHHDKVMMESWFHLNDYILEGGVPFKRAHGMIQFDYTGTDERFNHVFNQGMAHHTILVMKKLLDNY-NGFNDVKVLVDVGGNIGVNVSMIVAKHTHIKGINYDLPHVIADAPSYPGVEHVGGNMFESIPQADAIFMKWVLH 270          
BLAST of DY259912 vs. ExPASy Swiss-Prot
Match: COMT1_MEDSA (Caffeic acid 3-O-methyltransferase OS=Medicago sativa PE=1 SV=1)

HSP 1 Score: 141.739 bits (356), Expect = 6.150e-33
Identity = 88/255 (34.51%), Postives = 141/255 (55.29%), Query Frame = 2
Query:   74 QAQVWQLMLAFAD--SMA*KSAVELRLADIMHCHG--SPITLPQLASGINSSCPDVHIIPSLTRIMRMLVRKGVF--AAHRSSDGSEETMYGLTQISKWLLRDSE-MSLAPMILFQNSQLLQAPWHHLSQCVQEGGNAFKKAHGCEMWDFAXXXXXXXXXXXKAMACTAKIVMSTLLSHYKDGFDGIRSLVDVGGGTGEELAEIVEFHPHIKGVNFDLPHVVCPTPVYEGVSHVGSDMA*RGSYC*CIFKKWILH 817
            +A ++ + LA A    M  KSA+EL L +I+   G  + I+  ++AS + ++ PD  ++  L R++R+L    +   +     DG  + +YGL  ++K+L+++ + +S++ + L    ++L   W+HL   V +GG  F KA+G   +++            K M+  + I M  +L  Y  GF+G++SLVDVGGGTG  +  IV  +P IKG+NFDLPHV+   P Y GV HVG DM         +F KWI H
Sbjct:   18 EANLFAMQLASASVLPMILKSALELDLLEIIAKAGPGAQISPIEIASQLPTTNPDAPVM--LDRMLRLLACYIILTCSVRTQQDGKVQRLYGLATVAKYLVKNEDGVSISALNLMNQDKVLMESWYHLKDAVLDGGIPFNKAYGMTAFEYHGTDPRFNKVFNKGMSDHSTITMKKILETYT-GFEGLKSLVDVGGGTGAVINTIVSKYPTIKGINFDLPHVIEDAPSYPGVEHVGGDMFVSIPKADAVFMKWICH 269          
BLAST of DY259912 vs. ExPASy Swiss-Prot
Match: COMT1_COFCA (Caffeic acid 3-O-methyltransferase OS=Coffea canephora PE=2 SV=1)

HSP 1 Score: 140.969 bits (354), Expect = 1.049e-32
Identity = 88/255 (34.51%), Postives = 143/255 (56.08%), Query Frame = 2
Query:   74 QAQVWQLMLAFAD--SMA*KSAVELRLADIMHCHG--SPITLPQLASGINSSCPDVHIIPSLTRIMRMLVRKGVFAA--HRSSDGSEETMYGLTQISKWLLRDSE-MSLAPMILFQNSQLLQAPWHHLSQCVQEGGNAFKKAHGCEMWDFAXXXXXXXXXXXKAMACTAKIVMSTLLSHYKDGFDGIRSLVDVGGGTGEELAEIVEFHPHIKGVNFDLPHVVCPTPVYEGVSHVGSDMA*RGSYC*CIFKKWILH 817
            +A ++ + LA A    M  KSA+EL L +++   G  + ++  +LA+ + +  P+  I+  L RI+R+L    V     +  +DG  E +YGL  + K+L ++++ +S+AP++L    ++L   W+HL   V +GG  F KA+G   +++            + M+  + I M  +L  Y+ GF+G++++VDVGGGTG  L  I+  +P IKG+NF+LPHVV   P + GV HVG DM         IF KWI H
Sbjct:    5 EACLFAMSLASASVLPMVLKSAIELDLLELIAKAGPGAYVSPSELAAQLPTHNPEAPIM--LDRILRLLATYSVLDCKLNNLADGGVERLYGLAPVCKFLTKNADGVSMAPLLLMNQDKVLMESWYHLKDAVLDGGIPFNKAYGMTAFEYHGTDPRFNKVFNQGMSNHSTITMKKILEVYR-GFEGLKTVVDVGGGTGATLNMIISKYPTIKGINFELPHVVEDAPSHSGVEHVGGDMFVSVPKGDAIFMKWICH 256          
BLAST of DY259912 vs. ExPASy Swiss-Prot
Match: COMT1_CAPAN (Caffeic acid 3-O-methyltransferase OS=Capsicum annuum GN=COMT PE=2 SV=2)

HSP 1 Score: 140.969 bits (354), Expect = 1.049e-32
Identity = 88/248 (35.48%), Postives = 133/248 (53.63%), Query Frame = 2
Query:   89 QLMLAFADSMA*KSAVELRLADIMHCHG--SPITLPQLASGINSSCPDVHIIPSLTRIMRMLVRKGVF--AAHRSSDGSEETMYGLTQISKWLLRDSE-MSLAPMILFQNSQLLQAPWHHLSQCVQEGGNAFKKAHGCEMWDFAXXXXXXXXXXXKAMACTAKIVMSTLLSHYKDGFDGIRSLVDVGGGTGEELAEIVEFHPHIKGVNFDLPHVVCPTPVYEGVSHVGSDMA*RGSYC*CIFKKWILH 817
            QL  A    M  KSA+EL L +IM   G  + I+  +LA+ + +  P+  ++  L R++R+L    V         DG  E +Y L  + K L ++++ +S+AP++L    ++L   W+HL+  V +GG  F KA+G   +++            + M+  + + M  +L  YK GF+G+ S+VDVGGGTG  +  IV  +P IKG+NFDL HV+   P Y GV HVG DM         IF KWI H
Sbjct:   21 QLASASVLPMVLKSALELDLLEIMAKAGPGAAISPSELAAQLPTKNPEAPVM--LDRMLRLLATYSVLNCTLRTLPDGRVERLYSLAPVCKLLTKNADGVSVAPLLLMNQDKVLMESWYHLTDAVLDGGVPFNKAYGMTAFEYHGTDPRFNKVFNRGMSDHSTMTMKKILEDYK-GFEGLNSIVDVGGGTGATVNMIVSKYPSIKGINFDLSHVIEDAPAYPGVEHVGRDMFVSVPKADAIFMKWICH 265          
BLAST of DY259912 vs. ExPASy Swiss-Prot
Match: COMT1_EUCGL (Caffeic acid 3-O-methyltransferase (Fragment) OS=Eucalyptus globulus GN=COMT1 PE=3 SV=1)

HSP 1 Score: 140.584 bits (353), Expect = 1.370e-32
Identity = 85/235 (36.17%), Postives = 130/235 (55.32%), Query Frame = 2
Query:  128 SAVELRLADIMHCHG--SPITLPQLASGINSSCPDVHIIPSLTRIMRMLVRKGVFAAHRSS--DGSEETMYGLTQISKWLLRDSE-MSLAPMILFQNSQLLQAPWHHLSQCVQEGGNAFKKAHGCEMWDFAXXXXXXXXXXXKAMACTAKIVMSTLLSHYKDGFDGIRSLVDVGGGTGEELAEIVEFHPHIKGVNFDLPHVVCPTPVYEGVSHVGSDMA*RGSYC*CIFKKWILH 817
            +A+EL L +IM   G  + +T  ++AS + +  PD  ++  L RI R+L    V         +G  E +YGL  + K+L+++ + +SLAP+ L    ++    W+++   + EGG  F KAHG   +D+            +AM+  + I+M  +L  Y +GF+G++++VDVGGGTG  L  IV  +P IKG+NFDLPHV+   P Y GV HVG DM         +F KWI H
Sbjct:   20 AAIELDLLEIMARAGPGAYLTPGEVASQLPTQNPDAPVM--LDRIFRLLASYSVLTCTLCDLPEGKVERLYGLAPLCKFLVKNEDGVSLAPLRLIDQDRVFLESWYYMKDAILEGGIPFHKAHGMTAFDYPGTDPRFNKIFNRAMSDHSTIMMKKILETY-NGFEGLKTVVDVGGGTGAILNMIVAKYPSIKGINFDLPHVIEDAPSYPGVEHVGGDMFVNIPNGDAVFMKWICH 251          
BLAST of DY259912 vs. ExPASy Swiss-Prot
Match: COMT1_CATRO (Caffeic acid 3-O-methyltransferase OS=Catharanthus roseus GN=COMT1 PE=2 SV=1)

HSP 1 Score: 139.813 bits (351), Expect = 2.337e-32
Identity = 85/239 (35.56%), Postives = 130/239 (54.39%), Query Frame = 2
Query:  116 MA*KSAVELRLADIMHCHG--SPITLPQLASGINSSCPDVHIIPSLTRIMRMLVRKGVFAAHRSS--DGSEETMYGLTQISKWLLRDSE-MSLAPMILFQNSQLLQAPWHHLSQCVQEGGNAFKKAHGCEMWDFAXXXXXXXXXXXKAMACTAKIVMSTLLSHYKDGFDGIRSLVDVGGGTGEELAEIVEFHPHIKGVNFDLPHVVCPTPVYEGVSHVGSDMA*RGSYC*CIFKKWILH 817
            M  KSA+EL L +++   G  + ++  +LA+ + +  PD  ++  L RI+R+L    V         DG  E +Y L  + K+L ++ + +S+A ++L    ++L   W+HL   V EGG  F KA+G   +++            + M+  + I+M  +L  Y+ GF G++++VDVGGGTG  L  IV  +P IKG+NFDLPHV+   P Y GV HVG DM         IF KWI H
Sbjct:   34 MVLKSAIELDLLELIKKSGPGAYVSPSELAAQLPTQNPDAPVM--LDRILRLLASYSVLNCTLKDLPDGGIERLYSLAPVCKFLTKNEDGVSMAALLLMNQDKVLMESWYHLKDAVLEGGIPFNKAYGMTAFEYHGKDPRFNKVFNQGMSNHSTIIMKKILEIYQ-GFQGLKTVVDVGGGTGATLNMIVSKYPSIKGINFDLPHVIEDAPSYPGVDHVGGDMFVSVPKGDAIFMKWICH 269          
The following BLAST results are available for this feature:
BLAST of DY259912 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 36
Match NameE-valueIdentityDescription
COMT1_ROSCH9.489e-3436.47Caffeic acid 3-O-methyltransferase OS=Rosa chinens... [more]
6OMT_COPJA9.489e-3433.00(RS)-norcoclaurine 6-O-methyltransferase OS=Coptis... [more]
COMT1_CLABR1.619e-3333.72Caffeic acid 3-O-methyltransferase OS=Clarkia brew... [more]
EOMT1_OCIBA2.761e-3334.31Eugenol O-methyltransferase OS=Ocimum basilicum GN... [more]
IMT1_MESCR4.709e-3334.16Inositol 4-methyltransferase OS=Mesembryanthemum c... [more]
COMT1_MEDSA6.150e-3334.51Caffeic acid 3-O-methyltransferase OS=Medicago sat... [more]
COMT1_COFCA1.049e-3234.51Caffeic acid 3-O-methyltransferase OS=Coffea canep... [more]
COMT1_CAPAN1.049e-3235.48Caffeic acid 3-O-methyltransferase OS=Capsicum ann... [more]
COMT1_EUCGL1.370e-3236.17Caffeic acid 3-O-methyltransferase (Fragment) OS=E... [more]
COMT1_CATRO2.337e-3235.56Caffeic acid 3-O-methyltransferase OS=Catharanthus... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAP10YJ15FM1 Fruit-TF Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY259912 ID=DY259912; Name=DY259912; organism=Citrus clementina; type=EST; length=993bp
CTAGCTTAGAGAGACTTAGAGAGAGAGAGAGAGAATGGAATCAGCTGACG
TTCGCGAGGACGTCCTAAGAGGGCAAGCCCAAGTTTGGCAACTCATGCTC
GCCTTTGCAGATTCCATGGCTTGAAAATCTGCCGTGGAGCTTCGCTTAGC
CGATATTATGCACTGCCATGGCAGCCCAATCACTTTGCCCCAGTTAGCCT
CAGGAATTAACTCATCGTGTCCAGATGTTCACATAATTCCCTCCCTTACG
CGCATCATGAGAATGCTTGTCCGGAAAGGAGTTTTCGCCGCACATCGTTC
ATCAGACGGCAGTGAAGAGACGATGTACGGATTGACGCAAATATCAAAAT
GGTTACTACGTGACTCCGAGATGAGTCTTGCTCCGATGATACTTTTCCAA
AACAGTCAACTGCTACAGGCACCGTGGCATCACCTTAGCCAATGTGTCCA
AGAAGGTGGTAATGCTTTCAAGAAGGCTCACGGCTGTGAAATGTGGGATT
TCGCTTCACAAAACTCTCAATTCAACAACTCGTTCAATAAGGCCATGGCA
TGCACGGCAAAGATTGTGATGAGCACACTCCTCTCACACTATAAAGACGG
GTTTGATGGCATACGATCACTGGTCGACGTGGGTGGTGGCACTGGCGAAG
AGCTTGCCGAGATTGTCGAATTCCATCCACACATCAAAGGTGTAAACTTT
GATTTGCCACATGTTGTTTGCCCAACCCCTGTGTATGAAGGAGTCTCGCA
CGTCGGAAGTGACATGGCTTAACGCGGTTCCTATTGCTGATGCATTTTTA
AGAAGTGGATTTTGCATGGATTGGGAATGACAACCCCGGTGTCGGGATTC
TGAAAACCGGCCAAAAAGCCAATTCCCGAAGAAACTGGAAAAGCTTGGGT
ATTTCTCAATTCGTTGGTAAAACAAAATGAAAAGCACGTATTTGGCCACC
CGGGCTATCTTTTTTGAGACCTCGCAGATTTGCCTCCCCCCAA
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