DY259912

Overview
NameDY259912
Unique NameDY259912
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length993
Libraries
Library NameType
Fruit-TFcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
DY259912_ssr18 microsatellite DY259912_ssr18:18..33. BLAST: Citrus ESTs to Prunus persica proteins V1
Homology
BLAST of DY259912 vs. ExPASy Swiss-Prot
Match: OMT1_ORYSJ (Quercetin 3-O-methyltransferase 1 OS=Oryza sativa subsp. japonica GN=ROMT-9 PE=1 SV=1)

HSP 1 Score: 117.087 bits (292), Expect = 1.622e-25
Identity = 71/215 (33.02%), Postives = 106/215 (49.30%), Query Frame = 2
Query:  191 QLASGINSSCPDVHIIPSLTRIMRMLVRKGVFAAH--RSSDGSEETMYGLTQISKWLLRDSE-MSLAPMILFQNSQLLQAPWHHLSQCVQEGGNAFKKAHGCEMWDFAXXXXXXXXXXXKAMACTAKIVMSTLLSHYKDGFDGIRSLVDVGGGTGEELAEIVEFHPHIKGVNFDLPHVVCPTPVYEGVSHVGSDM---A*RGSYC*CIFKKWILH 817
            +L S  N +  D+     + R++R+L    V        +DG     Y    + KWL  + + +S+A + L    ++L   W++L   V +GG  F KA+G   +++            + M   + I+   LL  Y  GFD   ++VDVGGG G  +A +V  HPHI+G+N+DLPHV+   P + GV HVG DM     RG     I  KWILH
Sbjct:   68 KLPSKANPAAADM-----VDRMLRLLASYNVVRCEMEEGADGKLSRRYAAAPVCKWLTPNEDGVSMAALALMNQDKVLMESWYYLKDAVLDGGIPFNKAYGMTAFEYHGTDARFNRVFNEGMKNHSVIITKKLLDLYT-GFDAASTVVDVGGGVGATVAAVVSRHPHIRGINYDLPHVISEAPPFPGVEHVGGDMFASVPRGGD--AILMKWILH 274          
BLAST of DY259912 vs. ExPASy Swiss-Prot
Match: 7OMT9_MEDSA (Isoflavone-7-O-methyltransferase 9 OS=Medicago sativa PE=2 SV=1)

HSP 1 Score: 112.079 bits (279), Expect = 5.219e-24
Identity = 82/254 (32.28%), Postives = 121/254 (47.64%), Query Frame = 2
Query:   59 DVLRGQAQVWQLMLAFADSMA*KSAVELRLADIMHCHGSPITLPQLASGINSSCPDVHIIPSLTRIMRMLVRKGVFAAHRSSDGSEETMYGLTQISKWLLRDSEMSLAPMILFQNSQLLQAPWHHLSQCV-QEGGNAFKKAHGCEMWDFAXXXXXXXXXXXKAMACTAKIVMSTLLSHYKDGFDGIRSLVDVGGGTGEELAEIVEFHPHIKGVNFDLPHVVCPTPVYEGVSHVGSDMA*RGSYC*CIFKKWILH 817
            ++ + QA +++ + AF DSM+ K AV + + +I+H HG PI+L  L S +         I ++ R+MR L   G F         EE  Y LT  S+ L+R S++ LAPM+       L   +H L + + +E    F    G   WDF             AMA  +K++ +  L      FDG+ S+VDVGGGTG     I E  P +K + FD P VV        +++VG DM         +  K+ILH
Sbjct:   12 EIFKAQALLYKHIYAFIDSMSLKWAVGMNIPNIIHNHGKPISLSNLVSILQVPSSK---IGNVRRLMRYLAHNGFFEIITK----EEESYALTVASELLVRGSDLCLAPMVECVLDPTLSGSYHELKKWIYEEDLTLFGVTLGSGFWDFLDKNPEYNTSFNDAMASDSKLI-NLALRDCDFVFDGLESIVDVGGGTGTTAKIICETFPKLKCIVFDRPQVVENLSGSNNLTYVGGDMFTSIPNADAVLLKYILH 257          
BLAST of DY259912 vs. ExPASy Swiss-Prot
Match: 7OMT8_MEDSA (Isoflavone-7-O-methyltransferase 8 OS=Medicago sativa PE=1 SV=1)

HSP 1 Score: 111.694 bits (278), Expect = 6.816e-24
Identity = 82/254 (32.28%), Postives = 121/254 (47.64%), Query Frame = 2
Query:   59 DVLRGQAQVWQLMLAFADSMA*KSAVELRLADIMHCHGSPITLPQLASGINSSCPDVHIIPSLTRIMRMLVRKGVFAAHRSSDGSEETMYGLTQISKWLLRDSEMSLAPMILFQNSQLLQAPWHHLSQCV-QEGGNAFKKAHGCEMWDFAXXXXXXXXXXXKAMACTAKIVMSTLLSHYKDGFDGIRSLVDVGGGTGEELAEIVEFHPHIKGVNFDLPHVVCPTPVYEGVSHVGSDMA*RGSYC*CIFKKWILH 817
            ++ + QA +++ + AF DSM+ K AVE+ + +I+  HG PI+L  L S +         I ++ R+MR L   G F         EE  Y LT  S+ L+R S++ LAPM+       L   +H L + + +E    F    G   WDF             AMA  +K++ +  L      FDG+ S+VDVGGGTG     I E  P +K + FD P VV        +++VG DM         +  K+ILH
Sbjct:   12 EIFKAQALLYKHIYAFIDSMSLKWAVEMNIPNIIQNHGKPISLSNLVSILQVPSSK---IGNVRRLMRYLAHNGFFEIITK----EEESYALTVASELLVRGSDLCLAPMVECVLDPTLSGSYHELKKWIYEEDLTLFGVTLGSGFWDFLDKNPEYNTSFNDAMASDSKLI-NLALRDCDFVFDGLESIVDVGGGTGTTAKIICETFPKLKCIVFDRPQVVENLSGSNNLTYVGGDMFTSIPNADAVLLKYILH 257          
BLAST of DY259912 vs. ExPASy Swiss-Prot
Match: 7OMT6_MEDSA (Isoflavone-7-O-methyltransferase 6 OS=Medicago sativa PE=2 SV=1)

HSP 1 Score: 111.694 bits (278), Expect = 6.816e-24
Identity = 82/254 (32.28%), Postives = 121/254 (47.64%), Query Frame = 2
Query:   59 DVLRGQAQVWQLMLAFADSMA*KSAVELRLADIMHCHGSPITLPQLASGINSSCPDVHIIPSLTRIMRMLVRKGVFAAHRSSDGSEETMYGLTQISKWLLRDSEMSLAPMILFQNSQLLQAPWHHLSQCV-QEGGNAFKKAHGCEMWDFAXXXXXXXXXXXKAMACTAKIVMSTLLSHYKDGFDGIRSLVDVGGGTGEELAEIVEFHPHIKGVNFDLPHVVCPTPVYEGVSHVGSDMA*RGSYC*CIFKKWILH 817
            ++ + QA +++ + AF DSM+ K AVE+ + +I+  HG PI+L  L S +         I ++ R+MR L   G F         EE  Y LT  S+ L+R S++ LAPM+       L   +H L + + +E    F    G   WDF             AMA  +K++ +  L      FDG+ S+VDVGGGTG     I E  P +K + FD P VV        +++VG DM         +  K+ILH
Sbjct:   12 EIFKAQALLYKHIYAFIDSMSLKWAVEMNIPNIIQNHGKPISLSNLVSILQVPSSK---IGNVRRLMRYLAHNGFFEIITK----EEESYALTVASELLVRGSDLCLAPMVECVLDPTLSGSYHELKKWIYEEDLTLFGVTLGSGFWDFLDKNPEYNTSFNDAMASDSKLI-NLALRDCDFVFDGLESIVDVGGGTGTTAKIICETFPKLKCIVFDRPQVVENLSGSNNLTYVGGDMFTSIPNADAVLLKYILH 257          
BLAST of DY259912 vs. ExPASy Swiss-Prot
Match: CHOMT_MEDSA (Isoliquiritigenin 2'-O-methyltransferase OS=Medicago sativa PE=1 SV=1)

HSP 1 Score: 102.449 bits (254), Expect = 4.135e-21
Identity = 70/220 (31.82%), Postives = 107/220 (48.64%), Query Frame = 2
Query:  128 SAVELRLADIMHCHGSP---ITLPQLASGINSSCPDVHIIPSLTRIMRMLVRKGVFAAHRSS--DGSEETMYGLTQISKWLLRDSEMS-LAPMILFQNSQLLQAPWHHLSQCV-QEGGNAFKKAHGCEMWDFAXXXXXXXXXXXKAMACTAKIVMSTLLSHYKDGFDGIRSLVDVGGGTGEELAEIVEFHPHIKGVNFDLPHVVCPTPVYEGVSHVGSDM 766
            +A++L L +I+     P   ++  ++AS + +S     +   L R++R+L    V  +   +  DG  E +YGL+ + K+L+ D     LA    F     L   W +  + V  E  + FK  HG   ++F            K+M       M  +L  Y  GF+GI +LVDVGGG+G  L  I+  +P IKG+NFDLP V+   P   G+ HVG DM
Sbjct:   43 AAIDLNLFEIIAKATPPGAFMSPSEIASKLPASTQHSDLPNRLDRMLRLLASYSVLTSTTRTIEDGGAERVYGLSMVGKYLVPDESRGYLASFTTFLCYPALLQVWMNFKEAVVDEDIDLFKNVHGVTKYEFMGKDKKMNQIFNKSMVDVCATEMKRMLEIYT-GFEGISTLVDVGGGSGRNLELIISKYPLIKGINFDLPQVIENAPPLSGIEHVGGDM 261          
BLAST of DY259912 vs. ExPASy Swiss-Prot
Match: COOMT_COPJA (Columbamine O-methyltransferase OS=Coptis japonica PE=1 SV=1)

HSP 1 Score: 93.2041 bits (230), Expect = 2.509e-18
Identity = 69/239 (28.87%), Postives = 114/239 (47.70%), Query Frame = 2
Query:   56 EDVLRGQAQVWQLMLAFADSMA*KSAVELRLADIMHCHGSPITLPQLASGINSSCPDVHIIPSLTRIMRMLVRKGVFAAHRSSDGSEETMYGLTQISKWLLRDSEMSLAPMILFQNSQLLQAPWHHLSQCVQEGGNAFKKAHGCEMWDFAXXXXXXXXXXXKAMACTAKIVMSTLLSHY--KDGFDGIRSLVDVGGGTGEELAEIVEFHPHIKGVNFDLPHVVCPTPVYEGVSHVGSDM 766
            +D ++ QAQVW+ M  FA+++  +S V L + DI+H +G P+TL QL + +         I      MR LV   +F    +   ++E  Y LT  SK L+   + SLAP ++ Q      + W H+   V +G   + +++   M++              AM   +  ++  L+S    ++  DG+ S+VDVGG +G     IV+  PH+K    DL HV+        + +V  DM
Sbjct:   10 DDEIKAQAQVWKHMFGFAETIMLRSTVSLGIPDIIHNNG-PVTLSQLVTHLPLKSTS---IDRFHHFMRYLVHMQLFTIS-TDQITKEDKYELTPASKLLVHGHQKSLAPYVMLQTHPEEFSVWSHVIN-VLDGKKPYWESNDTSMYEKTEGDPEINEILNDAMTSHSTFMLPALVSGLMKENVLDGVASIVDVGGNSGVVAKGIVDAFPHVKCSVMDLNHVIERVIKNPKLDYVAGDM 242          
The following BLAST results are available for this feature:
BLAST of DY259912 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 36
Match NameE-valueIdentityDescription
OMT1_ORYSJ1.622e-2533.02Quercetin 3-O-methyltransferase 1 OS=Oryza sativa ... [more]
7OMT9_MEDSA5.219e-2432.28Isoflavone-7-O-methyltransferase 9 OS=Medicago sat... [more]
7OMT8_MEDSA6.816e-2432.28Isoflavone-7-O-methyltransferase 8 OS=Medicago sat... [more]
7OMT6_MEDSA6.816e-2432.28Isoflavone-7-O-methyltransferase 6 OS=Medicago sat... [more]
CHOMT_MEDSA4.135e-2131.82Isoliquiritigenin 2'-O-methyltransferase OS=Medica... [more]
COOMT_COPJA2.509e-1828.87Columbamine O-methyltransferase OS=Coptis japonica... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAP10YJ15FM1 Fruit-TF Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY259912 ID=DY259912; Name=DY259912; organism=Citrus clementina; type=EST; length=993bp
CTAGCTTAGAGAGACTTAGAGAGAGAGAGAGAGAATGGAATCAGCTGACG
TTCGCGAGGACGTCCTAAGAGGGCAAGCCCAAGTTTGGCAACTCATGCTC
GCCTTTGCAGATTCCATGGCTTGAAAATCTGCCGTGGAGCTTCGCTTAGC
CGATATTATGCACTGCCATGGCAGCCCAATCACTTTGCCCCAGTTAGCCT
CAGGAATTAACTCATCGTGTCCAGATGTTCACATAATTCCCTCCCTTACG
CGCATCATGAGAATGCTTGTCCGGAAAGGAGTTTTCGCCGCACATCGTTC
ATCAGACGGCAGTGAAGAGACGATGTACGGATTGACGCAAATATCAAAAT
GGTTACTACGTGACTCCGAGATGAGTCTTGCTCCGATGATACTTTTCCAA
AACAGTCAACTGCTACAGGCACCGTGGCATCACCTTAGCCAATGTGTCCA
AGAAGGTGGTAATGCTTTCAAGAAGGCTCACGGCTGTGAAATGTGGGATT
TCGCTTCACAAAACTCTCAATTCAACAACTCGTTCAATAAGGCCATGGCA
TGCACGGCAAAGATTGTGATGAGCACACTCCTCTCACACTATAAAGACGG
GTTTGATGGCATACGATCACTGGTCGACGTGGGTGGTGGCACTGGCGAAG
AGCTTGCCGAGATTGTCGAATTCCATCCACACATCAAAGGTGTAAACTTT
GATTTGCCACATGTTGTTTGCCCAACCCCTGTGTATGAAGGAGTCTCGCA
CGTCGGAAGTGACATGGCTTAACGCGGTTCCTATTGCTGATGCATTTTTA
AGAAGTGGATTTTGCATGGATTGGGAATGACAACCCCGGTGTCGGGATTC
TGAAAACCGGCCAAAAAGCCAATTCCCGAAGAAACTGGAAAAGCTTGGGT
ATTTCTCAATTCGTTGGTAAAACAAAATGAAAAGCACGTATTTGGCCACC
CGGGCTATCTTTTTTGAGACCTCGCAGATTTGCCTCCCCCCAA
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