DY259915

Overview
NameDY259915
Unique NameDY259915
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length887
Libraries
Library NameType
Fruit-TFcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY259915 vs. ExPASy Swiss-Prot
Match: THI4_HALMA (Putative thiazole biosynthetic enzyme OS=Haloarcula marismortui GN=rrnAC1782 PE=3 SV=2)

HSP 1 Score: 91.6633 bits (226), Expect = 6.160e-18
Identity = 59/202 (29.21%), Postives = 101/202 (50.00%), Query Frame = 1
Query:  205 KFDPIKESIVSREMTRRYMTDMITYADTDXXXXGAGSAGLSCAYELSKNPNIQIAIIEQSVSPGGGAWLSGQLFSAMVVRKPAHIFLDELGIDY----DEQDSYVVIKHAALFTSTIMSKLLARPNVKLFNAVAAEDLIVK-GGRVGGVVTNWALVSMNHDTQSCMDPNVMETKVVVSSCGHD----------GPFGAPGVK 765
            +F  + E+ V+R + + +  + + ++D+D    G G +GL  A EL++   +Q+ ++E++   GGG WL G L + + VR PA   LDEL +D+    D +  YV     A    + + K       K+ N     D++++   RVGG+V NW  V       +C+DP  +E  +V+ + GHD          G   APG++
Sbjct:    9 QFSDVGEAEVTRAIGQEWTEEFMDFSDSDVIIVGGGPSGLMAAKELAER-GVQVMVVEKNNYLGGGFWLGGFLMNKVTVRDPAQQVLDELEVDHKRSKDSEGLYVANGPEA---CSGLIKAACDAGAKMQNMTEFTDIVIREDHRVGGIVMNWTPVHALPREITCVDPIAVEADLVIDATGHDAMAVKKLDERGVLNAPGLE 206          
BLAST of DY259915 vs. ExPASy Swiss-Prot
Match: THI4_NATPD (Putative thiazole biosynthetic enzyme OS=Natronomonas pharaonis (strain DSM 2160 / ATCC 35678) GN=NP5174A PE=3 SV=1)

HSP 1 Score: 90.8929 bits (224), Expect = 1.051e-17
Identity = 57/199 (28.64%), Postives = 99/199 (49.75%), Query Frame = 1
Query:  205 KFDPIKESIVSREMTRRYMTDMITYADTDXXXXGAGSAGLSCAYELSKNPNIQIAIIEQSVSPGGGAWLSGQLFSAMVVRKPAHIFLDELGIDYD-EQDSYVVIKHAALFTSTIMSKLLARPNVKLFNAVAAEDLIVK-GGRVGGVVTNWALVSMNHDTQSCMDPNVMETKVVVSSCGHD----------GPFGAPGVK 765
            +F  + E+ V+R + + +  + + ++D+D    G G +GL  A ELS+   +Q  ++E++   GGG WL G L + + VR PA   L++L +D+   QDS  +         + + K       K+ N     D++++   RVGG+V NW  V       +C+DP  +E  +V+ + GHD          G   APG++
Sbjct:    6 QFSDVGEAEVTRAIGQEWTEEFMDFSDSDVIIVGGGPSGLMAAKELSER-GVQTMVVEKNNYLGGGFWLGGFLMNKVTVRDPAQNVLEDLDVDFKRSQDSEGLYVANGPEACSGLIKAACDAGAKMQNMTEFTDIVIREDHRVGGIVMNWTPVHALPREITCVDPIAVEADLVIDATGHDAVAVSKLQERGVLNAPGIE 203          
BLAST of DY259915 vs. ExPASy Swiss-Prot
Match: THI4_METAC (Putative thiazole biosynthetic enzyme OS=Methanosarcina acetivorans GN=MA_2851 PE=3 SV=1)

HSP 1 Score: 88.5817 bits (218), Expect = 5.215e-17
Identity = 55/178 (30.90%), Postives = 94/178 (52.81%), Query Frame = 1
Query:  217 IKESIVSREMTRRYMTDMITYADTDXXXXGAGSAGLSCAYELSKNPNIQIAIIEQSVSPGGGAWLSGQLFSAMVVRKPAHIFLDELGIDYDEQDSYVVIKHAALFTSTIMSKLLA---RPNVKLFNAVAAEDLIVK-GGRVGGVVTNWALVSMNHDTQSCMDPNVMETKVVVSSCGHD 738
            + E I++R +   Y    + Y D D    G G A L  A  L++   +++A+ EQ +S GGG W  G +F  +VV++ A   LD+ GI Y E +S   + ++       + KL+A       ++FN V+ ED++++   RV G+V NW  V+     +  +DP ++ TK+V+   GH+
Sbjct:    3 LDEVIITRAIFDEYSKTFLDYTDIDVALVGGGPANLVAAKYLAE-AGVKVALYEQKLSLGGGMWAGGMMFPRIVVQEEATRILDDFGIRYKEYESGYYVANSV----ESVGKLIAGATSAGAEVFNLVSFEDIMIRENDRVTGIVINWGPVTTQ---RLHVDPLMIRTKLVIDGTGHE 172          
BLAST of DY259915 vs. ExPASy Swiss-Prot
Match: THI4_METMJ (Putative thiazole biosynthetic enzyme OS=Methanoculleus marisnigri (strain ATCC 35101 / DSM 1498 / JR1) GN=Memar_2251 PE=3 SV=1)

HSP 1 Score: 87.8113 bits (216), Expect = 8.895e-17
Identity = 55/176 (31.25%), Postives = 86/176 (48.86%), Query Frame = 1
Query:  217 IKESIVSREMTRRYMTDMITYADTDXXXXGAGSAGLSCAYELSKNPNIQIAIIEQSVSPGGGAWLSGQLFSAMVVRKPAHIFLDELGIDYDE-QDSYVVIKHAALFTSTIMSKLLARPNVKLFNAVAAEDLIVKG-GRVGGVVTNWALVSMNHDTQSCMDPNVMETKVVVSSCGHD 738
            + E  +SR +       +I + + D    G G +GL+CA  L +   ++ A+IE+ +S GGG W  G +F  +VV++ A   LD  GI Y   ++ Y V K         ++       V+ FN    ED++++G GR+GG+V NW  V M       +DP  M     V + GHD
Sbjct:    3 LNEVTISRAILEEQHRALIDHLEMDAAVIGGGPSGLACAALLGEK-GVKCALIEKKLSIGGGMWGGGMMFPRIVVQEDARRLLDRFGIAYKAFEEGYYVAKSVEAVAK--LTAAACDAGVEFFNLTTVEDVMIRGDGRIGGLVVNWTPVDM---AGLHVDPLTMACTCTVDATGHD 172          
BLAST of DY259915 vs. ExPASy Swiss-Prot
Match: THI4_AERPE (Putative thiazole biosynthetic enzyme OS=Aeropyrum pernix GN=APE_2149.1 PE=3 SV=2)

HSP 1 Score: 87.8113 bits (216), Expect = 8.895e-17
Identity = 51/177 (28.81%), Postives = 89/177 (50.28%), Query Frame = 1
Query:  208 FDPIKESIVSREMTRRYMTDMITYADTDXXXXGAGSAGLSCAYELSKNPNIQIAIIEQSVSPGGGAWLSGQLFSAMVVRKPAHIFLDELGIDYDEQDSYVVIKHAALFTSTIMSKLLARPNVKLFNAVAAEDLIVKGGRVGGVVTNWALVSMNHDTQSCMDPNVMETKVVVSSCGHD 738
            F  + E+ V+  +   + + +  +  +D    GAG AGL+ A+ L++    ++ I+EQ+   GGG WL G   + + +R PA   LDEL + Y+     +      L  + + ++ L     ++ N    +D+IV+  RV GVV NW+ V       +C+DP  +  + VV + GHD
Sbjct:    3 FARVNEADVTEAILDGFYSSLKKHLRSDVIVVGAGPAGLTAAWRLAE-AGARVLIVEQNNYLGGGLWLGGYFMNPVTIRAPAQRILDELEVPYEAVKPGLYRTKGPLLAAKLAARAL-EAGAEVLNLTMLDDVIVENSRVAGVVVNWSPVQGLPRQITCVDPVGLRAEYVVDATGHD 177          
BLAST of DY259915 vs. ExPASy Swiss-Prot
Match: THI4_METMA (Putative thiazole biosynthetic enzyme OS=Methanosarcina mazei GN=MM_0222 PE=3 SV=1)

HSP 1 Score: 87.4261 bits (215), Expect = 1.162e-16
Identity = 56/178 (31.46%), Postives = 92/178 (51.69%), Query Frame = 1
Query:  217 IKESIVSREMTRRYMTDMITYADTDXXXXGAGSAGLSCAYELSKNPNIQIAIIEQSVSPGGGAWLSGQLFSAMVVRKPAHIFLDELGIDYDEQDSYVVIKHAALFTSTIMSKLLA---RPNVKLFNAVAAEDLIVK-GGRVGGVVTNWALVSMNHDTQSCMDPNVMETKVVVSSCGHD 738
            + E I++R +   Y    + Y D D    G G A L  A  L++    ++AI EQ +S GGG W  G +F  +VV++ A   LD+ GI Y E +    + ++       + KL+A       ++FN V+ ED++++   RV G+V NW  V+     +  +DP ++ TK+V+   GHD
Sbjct:    3 LDEVIITRAIFEEYSKTFLEYTDIDVALVGGGPANLVAAKYLAE-AGAKVAIYEQKLSLGGGMWAGGMMFPRIVVQEEACRVLDDFGIRYKEYEPGYFVANSV----ESVGKLIAGATSAGAEVFNLVSFEDIMIRENDRVTGIVINWGPVTTQ---RLHVDPLMIRTKLVIDGTGHD 172          
BLAST of DY259915 vs. ExPASy Swiss-Prot
Match: THI4_METBF (Putative thiazole biosynthetic enzyme OS=Methanosarcina barkeri (strain Fusaro / DSM 804) GN=Mbar_A2100 PE=3 SV=1)

HSP 1 Score: 85.8853 bits (211), Expect = 3.380e-16
Identity = 56/176 (31.82%), Postives = 89/176 (50.57%), Query Frame = 1
Query:  217 IKESIVSREMTRRYMTDMITYADTDXXXXGAGSAGLSCAYELSKNPNIQIAIIEQSVSPGGGAWLSGQLFSAMVVRKPAHIFLDELGIDYDE-QDSYVVIKHAALFTSTIMSKLLARPNVKLFNAVAAEDLIVK-GGRVGGVVTNWALVSMNHDTQSCMDPNVMETKVVVSSCGHD 738
            + E I++R +   Y    + Y + D    G G A L  A  L++    ++AI EQ +S GGG W  G +F  +VV++ A   LD+ GI Y E Q  Y V          I     A    ++FN V+ ED++++   RV G+V NW  V++    +  +DP ++ TK+V+   GH+
Sbjct:    3 LDEVIITRAIFDEYSKTFLDYTEVDVALIGGGPANLVAARYLAE-AGAKVAIYEQKLSLGGGMWAGGMMFPRIVVQEEACRILDDFGIRYKEYQPGYYVANSVESVGKLISGATSA--GAEVFNLVSFEDVMIRENDRVTGIVVNWGPVTVQ---RLHVDPLMIRTKLVIDGTGHE 172          
BLAST of DY259915 vs. ExPASy Swiss-Prot
Match: THI4_DESOH (Putative thiazole biosynthetic enzyme OS=Desulfococcus oleovorans (strain DSM 6200 / Hxd3) GN=Dole_2426 PE=3 SV=1)

HSP 1 Score: 83.5741 bits (205), Expect = 1.678e-15
Identity = 54/175 (30.86%), Postives = 88/175 (50.29%), Query Frame = 1
Query:  217 IKESIVSREMTRRYMTDMITYADTDXXXXGAGSAGLSCAYELSKNPNIQIAIIEQSVSPGGGAWLSGQLFSAMVVRKPAHIFLDELGIDYD--EQDSYVVIKHAALFTSTIMSKLLARPNVKLFNAVAAEDLIVKGGRVGGVVTNWALVSMNHDTQSCMDPNVMETKVVVSSCGH 735
            + E  +SR +  R+   +I   + D    G G +GL  A+ L++    ++A+ E+ +S GGG W    LF+ +VV+K A   LD + I Y    +D Y      A+ T T  +   A+  V +FN V  ED++++  R+ G+V NW+ V M       +DP  M    V+ + GH
Sbjct:    3 LNEVTISRAIIDRFYEKLIANLEVDVAVVGGGPSGLVAAWRLARAGR-KVALFERKLSIGGGMWGGAMLFNEIVVQKSALHVLDAMEIGYRLYAEDYYTADAVEAISTLTSQA---AKAGVAIFNCVTVEDVMIRPDRIVGLVLNWSPVEM---AGLHVDPLAMRASFVIDATGH 170          
BLAST of DY259915 vs. ExPASy Swiss-Prot
Match: THI4_SULAC (Putative thiazole biosynthetic enzyme OS=Sulfolobus acidocaldarius GN=Saci_0854 PE=3 SV=1)

HSP 1 Score: 80.4925 bits (197), Expect = 1.420e-14
Identity = 53/183 (28.96%), Postives = 89/183 (48.63%), Query Frame = 1
Query:  196 NTFKFDPIKESIVSREMTRRYMTDMITYADTDXXXXGAGSAGLSCAYELSKNPNIQIAIIEQSVSPGGGAWLSGQLFSAMVVRKPAHIFLDELGIDYDEQDSYVVIKHAALFTSTIMSKLLARPNVKLFNAVAAEDLIVKGG--RVGGVVTNWALVSMNHDTQSCMDPNVMETKVVVSSCGHD 738
            ++ K   I E  +SR + ++ M D + + + D    GAG AG+S AY L+K+  ++  + E+ +S GGG      LF  +V+  PA   L E+ I  ++ +  V I  +A F + + +  +     K+ + V  +D+I +    RV GV   W    M       +DP  +  K VV + GHD
Sbjct:    3 DSIKIKAIDEVKISRYIIKQTMEDWMNFVENDVVIVGAGPAGMSAAYYLAKH-GLKTLVFERRLSFGGGIGGGAMLFHKLVIESPADEVLKEMNIRLEKVEDGVYIVDSAEFMAKLAASAI-DAGAKIIHGVTVDDVIFRENPLRVAGVAVEWTATQM---AGLHVDPVFISAKAVVDATGHD 180          
BLAST of DY259915 vs. ExPASy Swiss-Prot
Match: THI4_METTP (Putative thiazole biosynthetic enzyme OS=Methanosaeta thermophila (strain DSM 6194 / PT) GN=Mthe_1121 PE=3 SV=2)

HSP 1 Score: 80.1073 bits (196), Expect = 1.855e-14
Identity = 54/179 (30.17%), Postives = 90/179 (50.28%), Query Frame = 1
Query:  217 IKESIVSREMTRRYMTDMITYADTDXXXXGAGSAGLSCAYELSKNPNIQIAIIEQSVSPGGGAWLSGQLFSAMVVRKPAHIFLDELGIDYDE-QDSYVVIKHAALFTSTIMSKLLA---RPNVKLFNAVAAEDLIVK-GGRVGGVVTNWALVSMNHDTQSCMDPNVMETKVVVSSCGHD 738
            + E  ++R +   Y+   +   D D    GAG A L  A  L++  ++++ + E+ +S GGG W  G +F  +VV+K A   LDE  I Y E ++ Y V       +  +++KL A       +L N V+ ED++++ G R+ G+V NW    M       +DP  +  +VV+   GHD
Sbjct:    3 LDEVKITRAIVESYLESFLKCTDVDVALVGAGPANLVAAKRLAE-ADVRVVLFEKRLSVGGGLWGGGMMFPRIVVQKEACRILDEYDIWYREFEEGYYVAD-----SIEVVAKLTAGAIDAGAELINLVSVEDVMIREGDRIVGLVINWTAADM---AGIHVDPLAIRARVVIDGTGHD 172          
The following BLAST results are available for this feature:
BLAST of DY259915 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 47
Match NameE-valueIdentityDescription
THI4_HALMA6.160e-1829.21Putative thiazole biosynthetic enzyme OS=Haloarcul... [more]
THI4_NATPD1.051e-1728.64Putative thiazole biosynthetic enzyme OS=Natronomo... [more]
THI4_METAC5.215e-1730.90Putative thiazole biosynthetic enzyme OS=Methanosa... [more]
THI4_METMJ8.895e-1731.25Putative thiazole biosynthetic enzyme OS=Methanocu... [more]
THI4_AERPE8.895e-1728.81Putative thiazole biosynthetic enzyme OS=Aeropyrum... [more]
THI4_METMA1.162e-1631.46Putative thiazole biosynthetic enzyme OS=Methanosa... [more]
THI4_METBF3.380e-1631.82Putative thiazole biosynthetic enzyme OS=Methanosa... [more]
THI4_DESOH1.678e-1530.86Putative thiazole biosynthetic enzyme OS=Desulfoco... [more]
THI4_SULAC1.420e-1428.96Putative thiazole biosynthetic enzyme OS=Sulfolobu... [more]
THI4_METTP1.855e-1430.17Putative thiazole biosynthetic enzyme OS=Methanosa... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAP10YJ19FM1 Fruit-TF Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY259915 ID=DY259915; Name=DY259915; organism=Citrus clementina; type=EST; length=887bp
GTAAAAAAAAAAAACATGGCAGCCATGGCTTCTACAGCTTTCGCTCCTTC
AGTTTCGTCTACCACCAATAAGCTCTTTGACTCATCCTTTCATGGGGCTC
CCATGTCACCTTCTCTTCTACGTCTTCAACCCATCAAATCTTCTCGTCCC
AACAACTTGTCCATTTCTGCTTCTGCTTCTCCTCCTTATGACTTGAACAC
TTTCAAGTTTGACCCCATCAAAGAATCCATTGTTTCTCGTGAAATGACGC
GCAGGTACATGACGGACATGATCACTTATGCTGACACTGATGTGGTAGTG
GTTGGTGCTGGCTCTGCTGGCCTCTCTTGTGCTTATGAGCTCAGCAAAAA
CCCCAACATTCAGATTGCTATTATCGAACAGTCTGTTAGCCCCGGCGGTG
GCGCGTGGCTCAGTGGACAGCTCTTCTCTGCCATGGTTGTGCGCAAACCA
GCCCACATCTTCCTTGACGAGCTTGGCATCGACTACGATGAGCAAGACAG
CTATGTTGTGATCAAGCATGCAGCGCTGTTCACCTCCACTATAATGAGCA
AGCTCCTGGCCCGCCCCAACGTCAAGCTCTTTAATGCAGTGGCAGCCGAG
GACTTGATAGTCAAAGGCGGCAGAGTTGGTGGTGTGGTGACCAACTGGGC
GTTGGTGTCAATGAATCACGATACACAGTCTTGCATGGATCCCAATGTAA
TGGAAACGAAAGTGGTTGTGAGCTCCTGTGGCCATGATGGGCCTTTTGGG
GCCCCTGGAGTAAAGAGGTGAAGAATTACGGAAATGATGAGGAAGTGGCT
GGAAAGGAAGGCCTGGACATGAACTCCGCCAAAAATGCCATTGTGAGGCT
GAACAGGGAAGGTGTGCCCGGTATGATATTTACCGGG
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