DY259915

Overview
NameDY259915
Unique NameDY259915
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length887
Libraries
Library NameType
Fruit-TFcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY259915 vs. ExPASy Swiss-Prot
Match: THI4_ARCFU (Putative thiazole biosynthetic enzyme OS=Archaeoglobus fulgidus GN=AF_0702 PE=3 SV=1)

HSP 1 Score: 80.1073 bits (196), Expect = 1.855e-14
Identity = 53/183 (28.96%), Postives = 95/183 (51.91%), Query Frame = 1
Query:  205 KFDPIKESIVSREMTRRYMTDMITYADTDXXXXGAGSAGLSCAYELSKNPNIQIAIIEQSVSPGGGAWLSGQLFSAMVVRKPAHIFLDELGIDYDEQDSYVVIKHAALFTSTIMSKLLAR---PNVKLFNAVAAEDLIVKGGRVG--GVVTNWALVSMNHDTQSCMDPNVMETKVVVSSCGHD 738
            KF  + E+ +++ +      + + YA++D    GAG +GL+ A  L++   ++  ++E+ +S GGG    G LF  +VV + A   LD+ GI Y E  +++V   A       M+KL A+      K+ + V+ ED+I +   +G  GV   W+ V +   +   +DP  + ++ VV + GHD
Sbjct:    4 KFTEVMEAEITKAIVETASEEWVEYAESDVIVVGAGPSGLTAARYLAEK-GLKTLVLERRLSFGGGIGGGGMLFHKVVVEREAKDILDDFGIRYTEHRNFLVADSA-----EFMAKLAAKAIDAGAKIIHGVSVEDVIFRDDPLGVRGVCIQWSAVEI---SGLHVDPLFLRSRAVVDATGHD 177          
BLAST of DY259915 vs. ExPASy Swiss-Prot
Match: THI4_METBU (Putative thiazole biosynthetic enzyme OS=Methanococcoides burtonii (strain DSM 6242) GN=Mbur_2109 PE=3 SV=1)

HSP 1 Score: 79.337 bits (194), Expect = 3.164e-14
Identity = 49/174 (28.16%), Postives = 86/174 (49.43%), Query Frame = 1
Query:  217 IKESIVSREMTRRYMTDMITYADTDXXXXGAGSAGLSCAYELSKNPNIQIAIIEQSVSPGGGAWLSGQLFSAMVVRKPAHIFLDELGIDYDEQDSYVVIKHAALFTSTIMSKLLARPNVKLFNAVAAEDLIVK-GGRVGGVVTNWALVSMNHDTQSCMDPNVMETKVVVSSCGH 735
            + E  +SR +   +    + Y D D    G G A L  A  L++   ++  I E+ ++ GGG W  G +F  +VV++ A   LDE GI Y E ++   + ++      ++S   +    ++FN V  ED++++    + G+V NW  V +    +  +DP  + +KVVV   GH
Sbjct:    3 LDEVTISRAIIEEFSKVFLDYTDVDVALVGGGPANLVAAKYLAE-AGLKTVIYEKKLAVGGGMWAGGMMFPRIVVQEDALHILDEFGISYHEYENGYYVANSIESVGKLISGATS-AGAEIFNLVNVEDVMIRENDEICGLVINWTAVEIG---KLHVDPLAIRSKVVVDGTGH 171          
BLAST of DY259915 vs. ExPASy Swiss-Prot
Match: THI4_FERNB (Putative thiazole biosynthetic enzyme OS=Fervidobacterium nodosum (strain ATCC 35602 / DSM 5306 / Rt17-B1) GN=Fnod_1422 PE=3 SV=1)

HSP 1 Score: 79.337 bits (194), Expect = 3.164e-14
Identity = 49/173 (28.32%), Postives = 83/173 (47.98%), Query Frame = 1
Query:  217 IKESIVSREMTRRYMTDMITYADTDXXXXGAGSAGLSCAYELSKNPNIQIAIIEQSVSPGGGAWLSGQLFSAMVVRKPAHIFLDELGIDYDEQDSYVVIKHAALFTSTIMSKLLARPNVKLFNAVAAEDLIVKGGRVGGVVTNWALVSMNHDTQSCMDPNVMETKVVVSSCGH 735
            +K+  +S+ + + Y   +    + D    G G + L+ A EL+KN   ++AI E    PGGG W  G +F+ +V+      +L E  I Y ++D ++V+   A+  ++ M     +    +FN V  EDL++   R+ GVV NW         +  +DP  +  K  V   GH
Sbjct:    3 MKDLKISQLIVKHYFQKLNDVLNVDVAIAGCGPSALALATELAKNGR-KVAIFEAKNEPGGGIWGGGMMFNELVLESELEWYLKEHHIKYKKEDEFIVVD--AVHFASAMLYNATKNGAYIFNNVFVEDLVMYNERISGVVINWMPTIKE---KLHVDPITVVAKFTVDGTGH 169          
BLAST of DY259915 vs. ExPASy Swiss-Prot
Match: THI4_SULIM (Putative thiazole biosynthetic enzyme OS=Sulfolobus islandicus (strain M.14.25 / Kamchatka #1) GN=M1425_1670 PE=3 SV=1)

HSP 1 Score: 78.9518 bits (193), Expect = 4.132e-14
Identity = 51/180 (28.33%), Postives = 86/180 (47.78%), Query Frame = 1
Query:  205 KFDPIKESIVSREMTRRYMTDMITYADTDXXXXGAGSAGLSCAYELSKNPNIQIAIIEQSVSPGGGAWLSGQLFSAMVVRKPAHIFLDELGIDYDEQDSYVVIKHAALFTSTIMSKLLARPNVKLFNAVAAEDLIVKGG--RVGGVVTNWALVSMNHDTQSCMDPNVMETKVVVSSCGHD 738
            K   ++E  +SR + +  M D   + ++D    GAG +GLS AY L+K   ++  + E+ +S GGG      LF  +++ KPA   L E+ +   E +  V +  +A F + + +  +     K+ + V  +D+I +    RV GV   W    M       +DP  +  K VV + GHD
Sbjct:    4 KIKQVEEVKISRYIIKETMEDWYQFVESDVVIVGAGPSGLSAAYYLAK-AGLKTLVFERRLSFGGGIGGGAMLFHKLIIEKPADEILREVNVRLKEVEEGVYVVDSAEFMAKLATAAI-DAGAKIIHGVTVDDVIFRENPLRVAGVAVEWTATQM---ASLHVDPIFISAKAVVDATGHD 178          
BLAST of DY259915 vs. ExPASy Swiss-Prot
Match: THI4_SULSO (Putative thiazole biosynthetic enzyme OS=Sulfolobus solfataricus GN=SSO0436 PE=3 SV=1)

HSP 1 Score: 78.5666 bits (192), Expect = 5.397e-14
Identity = 52/180 (28.89%), Postives = 85/180 (47.22%), Query Frame = 1
Query:  205 KFDPIKESIVSREMTRRYMTDMITYADTDXXXXGAGSAGLSCAYELSKNPNIQIAIIEQSVSPGGGAWLSGQLFSAMVVRKPAHIFLDELGIDYDEQDSYVVIKHAALFTSTIMSKLLARPNVKLFNAVAAEDLIVKGG--RVGGVVTNWALVSMNHDTQSCMDPNVMETKVVVSSCGHD 738
            K   + E  +SR + +  M D   + ++D    GAG +GLS AY L+K   ++  + E+ +S GGG      LF  +++ KPA   L E+ I   E +  V +  +A F + + +  +     K+ + V  +D+I +    RV GV   W    M       +DP  +  K VV + GHD
Sbjct:    4 KIKQVDEVKISRYIIKETMEDWYQFVESDVVIVGAGPSGLSAAYYLAK-AGLKTLVFERRLSFGGGIGGGAMLFHKLIIEKPADEILREVNIRLKEVEEGVYVVDSAEFMAKLATAAI-DAGAKIIHGVTVDDVIFRENPLRVAGVAVEWTATQM---ASLHVDPIFISAKAVVDATGHD 178          
BLAST of DY259915 vs. ExPASy Swiss-Prot
Match: THI4_SULIY (Putative thiazole biosynthetic enzyme OS=Sulfolobus islandicus (strain Y.G.57.14 / Yellowstone #1) GN=YG5714_1786 PE=3 SV=1)

HSP 1 Score: 78.1814 bits (191), Expect = 7.048e-14
Identity = 51/180 (28.33%), Postives = 85/180 (47.22%), Query Frame = 1
Query:  205 KFDPIKESIVSREMTRRYMTDMITYADTDXXXXGAGSAGLSCAYELSKNPNIQIAIIEQSVSPGGGAWLSGQLFSAMVVRKPAHIFLDELGIDYDEQDSYVVIKHAALFTSTIMSKLLARPNVKLFNAVAAEDLIVKGG--RVGGVVTNWALVSMNHDTQSCMDPNVMETKVVVSSCGHD 738
            K   + E  +SR + +  M D   + ++D    GAG +GLS AY L+K   ++  + E+ +S GGG      LF  +++ KPA   L E+ +   E +  V +  +A F + + +  +     K+ + V  +D+I +    RV GV   W    M       +DP  +  K VV + GHD
Sbjct:    4 KIKQVDEVKISRYIIKETMEDWYQFVESDVVIVGAGPSGLSAAYYLAK-AGLKTLVFERRLSFGGGIGGGAMLFHKLIIEKPADEILREVNVRLKEVEEGVYVVDSAEFMAKLATAAI-DAGAKIIHGVTVDDVIFRENPLRVAGVAVEWTATQM---ASLHVDPIFISAKAVVDATGHD 178          
BLAST of DY259915 vs. ExPASy Swiss-Prot
Match: THI4_SULIN (Putative thiazole biosynthetic enzyme OS=Sulfolobus islandicus (strain Y.N.15.51 / Yellowstone #2) GN=YN1551_1140 PE=3 SV=1)

HSP 1 Score: 78.1814 bits (191), Expect = 7.048e-14
Identity = 51/180 (28.33%), Postives = 85/180 (47.22%), Query Frame = 1
Query:  205 KFDPIKESIVSREMTRRYMTDMITYADTDXXXXGAGSAGLSCAYELSKNPNIQIAIIEQSVSPGGGAWLSGQLFSAMVVRKPAHIFLDELGIDYDEQDSYVVIKHAALFTSTIMSKLLARPNVKLFNAVAAEDLIVKGG--RVGGVVTNWALVSMNHDTQSCMDPNVMETKVVVSSCGHD 738
            K   + E  +SR + +  M D   + ++D    GAG +GLS AY L+K   ++  + E+ +S GGG      LF  +++ KPA   L E+ +   E +  V +  +A F + + +  +     K+ + V  +D+I +    RV GV   W    M       +DP  +  K VV + GHD
Sbjct:    4 KIKQVDEVKISRYIIKETMEDWYQFVESDVVIVGAGPSGLSAAYYLAK-AGLKTLVFERRLSFGGGIGGGAMLFHKLIIEKPADEILREVNVRLKEVEEGVYVVDSAEFMAKLATAAI-DAGAKIIHGVTVDDVIFRENPLRVAGVAVEWTATQM---ASLHVDPIFISAKAVVDATGHD 178          
BLAST of DY259915 vs. ExPASy Swiss-Prot
Match: THI4_SULIL (Putative thiazole biosynthetic enzyme OS=Sulfolobus islandicus (strain L.S.2.15 / Lassen #1) GN=LS215_1798 PE=3 SV=1)

HSP 1 Score: 78.1814 bits (191), Expect = 7.048e-14
Identity = 51/180 (28.33%), Postives = 85/180 (47.22%), Query Frame = 1
Query:  205 KFDPIKESIVSREMTRRYMTDMITYADTDXXXXGAGSAGLSCAYELSKNPNIQIAIIEQSVSPGGGAWLSGQLFSAMVVRKPAHIFLDELGIDYDEQDSYVVIKHAALFTSTIMSKLLARPNVKLFNAVAAEDLIVKGG--RVGGVVTNWALVSMNHDTQSCMDPNVMETKVVVSSCGHD 738
            K   + E  +SR + +  M D   + ++D    GAG +GLS AY L+K   ++  + E+ +S GGG      LF  +++ KPA   L E+ +   E +  V +  +A F + + +  +     K+ + V  +D+I +    RV GV   W    M       +DP  +  K VV + GHD
Sbjct:    4 KIKQVDEVKISRYIIKETMEDWYQFVESDVVIVGAGPSGLSAAYYLAK-AGLKTLVFERRLSFGGGIGGGAMLFHKLIIEKPADEILREVNVRLKEVEEGVYVVDSAEFMAKLATAAI-DAGAKIIHGVTVDDVIFRENPLRVAGVAVEWTATQM---ASLHVDPIFISAKAVVDATGHD 178          
BLAST of DY259915 vs. ExPASy Swiss-Prot
Match: THI4_SULIK (Putative thiazole biosynthetic enzyme OS=Sulfolobus islandicus (strain M.16.4 / Kamchatka #3) GN=M164_1717 PE=3 SV=1)

HSP 1 Score: 78.1814 bits (191), Expect = 7.048e-14
Identity = 51/180 (28.33%), Postives = 85/180 (47.22%), Query Frame = 1
Query:  205 KFDPIKESIVSREMTRRYMTDMITYADTDXXXXGAGSAGLSCAYELSKNPNIQIAIIEQSVSPGGGAWLSGQLFSAMVVRKPAHIFLDELGIDYDEQDSYVVIKHAALFTSTIMSKLLARPNVKLFNAVAAEDLIVKGG--RVGGVVTNWALVSMNHDTQSCMDPNVMETKVVVSSCGHD 738
            K   + E  +SR + +  M D   + ++D    GAG +GLS AY L+K   ++  + E+ +S GGG      LF  +++ KPA   L E+ +   E +  V +  +A F + + +  +     K+ + V  +D+I +    RV GV   W    M       +DP  +  K VV + GHD
Sbjct:    4 KIKQVDEVKISRYIIKETMEDWYQFVESDVVIVGAGPSGLSAAYYLAK-AGLKTLVFERRLSFGGGIGGGAMLFHKLIIEKPADEILREVNVRLKEVEEGVYVVDSAEFMAKLATAAI-DAGAKIIHGVTVDDVIFRENPLRVAGVAVEWTATQM---ASLHVDPIFISAKAVVDATGHD 178          
BLAST of DY259915 vs. ExPASy Swiss-Prot
Match: THI4_SULIA (Putative thiazole biosynthetic enzyme OS=Sulfolobus islandicus (strain M.16.27) GN=M1627_1786 PE=3 SV=1)

HSP 1 Score: 78.1814 bits (191), Expect = 7.048e-14
Identity = 51/180 (28.33%), Postives = 85/180 (47.22%), Query Frame = 1
Query:  205 KFDPIKESIVSREMTRRYMTDMITYADTDXXXXGAGSAGLSCAYELSKNPNIQIAIIEQSVSPGGGAWLSGQLFSAMVVRKPAHIFLDELGIDYDEQDSYVVIKHAALFTSTIMSKLLARPNVKLFNAVAAEDLIVKGG--RVGGVVTNWALVSMNHDTQSCMDPNVMETKVVVSSCGHD 738
            K   + E  +SR + +  M D   + ++D    GAG +GLS AY L+K   ++  + E+ +S GGG      LF  +++ KPA   L E+ +   E +  V +  +A F + + +  +     K+ + V  +D+I +    RV GV   W    M       +DP  +  K VV + GHD
Sbjct:    4 KIKQVDEVKISRYIIKETMEDWYQFVESDVVIVGAGPSGLSAAYYLAK-AGLKTLVFERRLSFGGGIGGGAMLFHKLIIEKPADEILREVNVRLKEVEEGVYVVDSAEFMAKLATAAI-DAGAKIIHGVTVDDVIFRENPLRVAGVAVEWTATQM---ASLHVDPIFISAKAVVDATGHD 178          
The following BLAST results are available for this feature:
BLAST of DY259915 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 47
Match NameE-valueIdentityDescription
THI4_ARCFU1.855e-1428.96Putative thiazole biosynthetic enzyme OS=Archaeogl... [more]
THI4_METBU3.164e-1428.16Putative thiazole biosynthetic enzyme OS=Methanoco... [more]
THI4_FERNB3.164e-1428.32Putative thiazole biosynthetic enzyme OS=Fervidoba... [more]
THI4_SULIM4.132e-1428.33Putative thiazole biosynthetic enzyme OS=Sulfolobu... [more]
THI4_SULSO5.397e-1428.89Putative thiazole biosynthetic enzyme OS=Sulfolobu... [more]
THI4_SULIY7.048e-1428.33Putative thiazole biosynthetic enzyme OS=Sulfolobu... [more]
THI4_SULIN7.048e-1428.33Putative thiazole biosynthetic enzyme OS=Sulfolobu... [more]
THI4_SULIL7.048e-1428.33Putative thiazole biosynthetic enzyme OS=Sulfolobu... [more]
THI4_SULIK7.048e-1428.33Putative thiazole biosynthetic enzyme OS=Sulfolobu... [more]
THI4_SULIA7.048e-1428.33Putative thiazole biosynthetic enzyme OS=Sulfolobu... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionKN0AAP10YJ19FM1 Fruit-TF Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY259915 ID=DY259915; Name=DY259915; organism=Citrus clementina; type=EST; length=887bp
GTAAAAAAAAAAAACATGGCAGCCATGGCTTCTACAGCTTTCGCTCCTTC
AGTTTCGTCTACCACCAATAAGCTCTTTGACTCATCCTTTCATGGGGCTC
CCATGTCACCTTCTCTTCTACGTCTTCAACCCATCAAATCTTCTCGTCCC
AACAACTTGTCCATTTCTGCTTCTGCTTCTCCTCCTTATGACTTGAACAC
TTTCAAGTTTGACCCCATCAAAGAATCCATTGTTTCTCGTGAAATGACGC
GCAGGTACATGACGGACATGATCACTTATGCTGACACTGATGTGGTAGTG
GTTGGTGCTGGCTCTGCTGGCCTCTCTTGTGCTTATGAGCTCAGCAAAAA
CCCCAACATTCAGATTGCTATTATCGAACAGTCTGTTAGCCCCGGCGGTG
GCGCGTGGCTCAGTGGACAGCTCTTCTCTGCCATGGTTGTGCGCAAACCA
GCCCACATCTTCCTTGACGAGCTTGGCATCGACTACGATGAGCAAGACAG
CTATGTTGTGATCAAGCATGCAGCGCTGTTCACCTCCACTATAATGAGCA
AGCTCCTGGCCCGCCCCAACGTCAAGCTCTTTAATGCAGTGGCAGCCGAG
GACTTGATAGTCAAAGGCGGCAGAGTTGGTGGTGTGGTGACCAACTGGGC
GTTGGTGTCAATGAATCACGATACACAGTCTTGCATGGATCCCAATGTAA
TGGAAACGAAAGTGGTTGTGAGCTCCTGTGGCCATGATGGGCCTTTTGGG
GCCCCTGGAGTAAAGAGGTGAAGAATTACGGAAATGATGAGGAAGTGGCT
GGAAAGGAAGGCCTGGACATGAACTCCGCCAAAAATGCCATTGTGAGGCT
GAACAGGGAAGGTGTGCCCGGTATGATATTTACCGGG
back to top