DY259918

Overview
NameDY259918
Unique NameDY259918
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length894
Libraries
Library NameType
Fruit-TFcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig1353 contig Ccv1_Contig1353:1..894. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of DY259918 vs. ExPASy Swiss-Prot
Match: PSKR1_DAUCA (Phytosulfokine receptor 1 OS=Daucus carota GN=PSKR PE=1 SV=1)

HSP 1 Score: 128.642 bits (322), Expect = 1.217e-33
Identity = 67/150 (44.67%), Postives = 97/150 (64.67%), Query Frame = 3
Query:  303 NSNSGYRFPFVAVQEATNNFDESWVIGIGGFGKVYKGELNDGTKVAVKRGNPRSQQGLAEFQTEIEMLSQFRHRHLVSLIGYCDEKNEMILIYEYMENGTLKGHLYG--SGLPSLSWKQKLEICIGSARGLHYLHTGYAKAVIPRDVKSA 746
            N +S        + ++T++F+++ +IG GGFG VYK  L DGTKVA+KR +  + Q   EFQ E+E LS+ +H +LV L+GYC+ KN+ +LIY YM+NG+L   L+    G PSL WK +L I  G+A GL YLH      ++ RD+KS+
Sbjct:  724 NKDSNNELSLDDILKSTSSFNQANIIGCGGFGLVYKATLPDGTKVAIKRLSGDTGQMDREFQAEVETLSRAQHPNLVHLLGYCNYKNDKLLIYSYMDNGSLDYWLHEKVDGPPSLDWKTRLRIARGAAEGLAYLHQSCEPHILHRDIKSS 873          

HSP 2 Score: 36.1946 bits (82), Expect = 1.217e-33
Identity = 20/44 (45.45%), Postives = 26/44 (59.09%), Query Frame = 1
Query:  748 NILPDENFMAKVADFGMSKTGTEIDPTHVNTALKRNLGYFDLEY 879
            NIL  + F+A +ADFG+++     D THV T L   LGY   EY
Sbjct:  874 NILLSDTFVAHLADFGLARLILPYD-THVTTDLVGTLGYIPPEY 916          
BLAST of DY259918 vs. ExPASy Swiss-Prot
Match: SIRK_ARATH (Senescence-induced receptor-like serine/threonine-protein kinase OS=Arabidopsis thaliana GN=SIRK PE=2 SV=1)

HSP 1 Score: 125.561 bits (314), Expect = 1.219e-33
Identity = 66/139 (47.48%), Postives = 90/139 (64.75%), Query Frame = 3
Query:  324 FPFVAVQEATNNFDESWVIGIGGFGKVYKGELNDGTKVAVKRGNPRSQQGLAEFQTEIEMLSQFRHRHLVSLIGYCDEKNEMILIYEYMENGTLKGHLYGSGLPSLSWKQKLEICIGSARGLHYLHTGYAKAVIPRDVK 740
            F +  V   TNNF+   VIG GGFGKVY G +N G +VAVK  +  S QG  EF+ E+++L +  H +L SL+GYC+E N M+LIYEYM N  L  +L G     LSW+++L+I + +A+GL YLH G    ++ RDVK
Sbjct:  564 FKYSEVVNITNNFER--VIGKGGFGKVYHGVIN-GEQVAVKVLSEESAQGYKEFRAEVDLLMRVHHTNLTSLVGYCNEINHMVLIYEYMANENLGDYLAGKRSFILSWEERLKISLDAAQGLEYLHNGCKPPIVHRDVK 699          

HSP 2 Score: 39.2762 bits (90), Expect = 1.219e-33
Identity = 18/49 (36.73%), Postives = 30/49 (61.22%), Query Frame = 1
Query:  748 NILPDENFMAKVADFGMSKTGTEIDPTHVNTALKRNLGYFDLEYFKRPQ 894
            NIL +E   AK+ADFG+S++ +      ++T +  ++GY D EY+   Q
Sbjct:  702 NILLNEKLQAKMADFGLSRSFSVEGSGQISTVVAGSIGYLDPEYYSTRQ 750          
BLAST of DY259918 vs. ExPASy Swiss-Prot
Match: Y5188_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g51880 OS=Arabidopsis thaliana GN=At1g51880 PE=2 SV=1)

HSP 1 Score: 124.02 bits (310), Expect = 1.219e-33
Identity = 65/142 (45.77%), Postives = 93/142 (65.49%), Query Frame = 3
Query:  321 RFPFVAVQEATNNFDESWVIGIGGFGKVYKGELNDGTKVAVKRGNPRSQQGLAEFQTEIEMLSQFRHRHLVSLIGYCDEKNEMILIYEYMENGTLKGHLYGS-GLPSLSWKQKLEICIGSARGLHYLHTGYAKAVIPRDVKS 743
            R  +  V + TNNF+   V+G GGFG VY G L D T+VAVK  +  S QG  EF+ E+E+L +  HR+LV L+GYCD+ + + LIYEYM NG LK ++ G  G   L+W+ +++I + +A+GL YLH G    ++ RDVK+
Sbjct:  555 RITYPEVLKMTNNFER--VLGKGGFGTVYHGNLED-TQVAVKMLSHSSAQGYKEFKAEVELLLRVHHRNLVGLVGYCDDGDNLALIYEYMANGDLKENMSGKRGGNVLTWENRMQIAVEAAQGLEYLHNGCTPPMVHRDVKT 693          

HSP 2 Score: 40.817 bits (94), Expect = 1.219e-33
Identity = 19/46 (41.30%), Postives = 30/46 (65.22%), Query Frame = 1
Query:  748 NILPDENFMAKVADFGMSKTGTEIDPTHVNTALKRNLGYFDLEYFK 885
            NIL +E + AK+ADFG+S++      +HV+T +    GY D EY++
Sbjct:  695 NILLNERYGAKLADFGLSRSFPVDGESHVSTVVAGTPGYLDPEYYR 740          
BLAST of DY259918 vs. ExPASy Swiss-Prot
Match: TMK1_ARATH (Probable receptor protein kinase TMK1 OS=Arabidopsis thaliana GN=TMK1 PE=1 SV=1)

HSP 1 Score: 135.961 bits (341), Expect = 2.066e-33
Identity = 69/139 (49.64%), Postives = 95/139 (68.35%), Query Frame = 3
Query:  339 VQEATNNFDESWVIGIGGFGKVYKGELNDGTKVAVKR--GNPRSQQGLAEFQTEIEMLSQFRHRHLVSLIGYCDEKNEMILIYEYMENGTLKGHLY---GSGLPSLSWKQKLEICIGSARGLHYLHTGYAKAVIPRDVK 740
            ++  TNNF    ++G GGFG VYKGEL+DGTK+AVKR      + +G AEF++EI +L++ RHRHLV+L+GYC + NE +L+YEYM  GTL  HL+     GL  L WKQ+L + +  ARG+ YLH    ++ I RD+K
Sbjct:  581 LRSVTNNFSSDNILGSGGFGVVYKGELHDGTKIAVKRMENGVIAGKGFAEFKSEIAVLTKVRHRHLVTLLGYCLDGNEKLLVYEYMPQGTLSRHLFEWSEEGLKPLLWKQRLTLALDVARGVEYLHGLAHQSFIHRDLK 719          

HSP 2 Score: 28.1054 bits (61), Expect = 2.066e-33
Identity = 16/44 (36.36%), Postives = 22/44 (50.00%), Query Frame = 1
Query:  748 NILPDENFMAKVADFGMSKTGTEIDPTHVNTALKRNLGYFDLEY 879
            NIL  ++  AKVADFG+ +   E     + T +    GY   EY
Sbjct:  722 NILLGDDMRAKVADFGLVRLAPE-GKGSIETRIAGTFGYLAPEY 764          
BLAST of DY259918 vs. ExPASy Swiss-Prot
Match: Y5181_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g51810 OS=Arabidopsis thaliana GN=At1g51810 PE=2 SV=1)

HSP 1 Score: 120.168 bits (300), Expect = 2.068e-33
Identity = 65/159 (40.88%), Postives = 97/159 (61.01%), Query Frame = 3
Query:  270 SKYSHGTTTSANSNSGYRFPFVAVQEATNNFDESWVIGIGGFGKVYKGELNDGTKVAVKRGNPRSQQGLAEFQTEIEMLSQFRHRHLVSLIGYCDEKNEMILIYEYMENGTLKGHLYGS-GLPSLSWKQKLEICIGSARGLHYLHTGYAKAVIPRDVKS 743
            S+ S  T  + N     +F +  V   TNNF +  ++G GGFG VY G +N   +VAVK  +  S QG  +F+ E+E+L +  H++LV L+GYC+E +++ LIYEYM NG L  H+ G  G   L+W  +L+I + +A+GL YLH G    ++ RDVK+
Sbjct:  553 SRSSEPTIVTKNK----KFTYAEVLTMTNNFQK--ILGKGGFGIVYYGSVNGTEQVAVKMLSHSSAQGYKQFKAEVELLLRVHHKNLVGLVGYCEEGDKLALIYEYMANGDLDEHMSGKRGGSILNWGTRLKIALEAAQGLEYLHNGCKPLMVHRDVKT 705          

HSP 2 Score: 43.8986 bits (102), Expect = 2.068e-33
Identity = 20/46 (43.48%), Postives = 31/46 (67.39%), Query Frame = 1
Query:  748 NILPDENFMAKVADFGMSKTGTEIDPTHVNTALKRNLGYFDLEYFK 885
            NIL +E+F  K+ADFG+S++      THV+T +   +GY D EY++
Sbjct:  707 NILLNEHFDTKLADFGLSRSFPIEGETHVSTVVAGTIGYLDPEYYR 752          
BLAST of DY259918 vs. ExPASy Swiss-Prot
Match: ACCR3_ARATH (Putative serine/threonine-protein kinase-like protein CCR3 OS=Arabidopsis thaliana GN=CCR3 PE=2 SV=1)

HSP 1 Score: 128.642 bits (322), Expect = 2.070e-33
Identity = 67/166 (40.36%), Postives = 100/166 (60.24%), Query Frame = 3
Query:  285 GTTTSANSNSGYRFPFVAVQEATNNFDESWVIGIGGFGKVYKGELNDGTKVAVKRGNPRS-----QQGLAEFQTEIEMLSQFRHRHLVSLIGYCDEKNEMILIYEYMENGTLKGHLYG-------SGLPSLSWKQKLEICIGSARGLHYLHTGYAKAVIPRDVKSA 746
            GT++  +++    F F  +  AT NF     IG G FG VY+G+LNDG +VA+KRG   +     Q+    F +EI  LS+  H+HLV L+GYC+E+ E +L+Y+YM+NG L  HL+        S L + SWK +++I + +ARG+ YLH      +I RD+KS+
Sbjct:  471 GTSSMKHADKAEEFSFSELASATGNFSLENKIGSGSFGVVYRGKLNDGREVAIKRGEVNAKMKKFQEKETAFDSEIAFLSRLHHKHLVRLVGYCEEREEKLLVYDYMKNGALYDHLHDKNNVEKHSSLIN-SWKMRIKIALDAARGIEYLHNYAVPPIIHRDIKSS 635          

HSP 2 Score: 35.4242 bits (80), Expect = 2.070e-33
Identity = 19/49 (38.78%), Postives = 28/49 (57.14%), Query Frame = 1
Query:  748 NILPDENFMAKVADFGMSKTGTEI----DPTHVNTALKRNLGYFDLEYF 882
            NIL D N++A+V+DFG+S  G  +    +P    T     +GY D EY+
Sbjct:  636 NILLDSNWVARVSDFGLSLMGPVLGKDHNPYQRPTKAAGTVGYIDPEYY 684          
BLAST of DY259918 vs. ExPASy Swiss-Prot
Match: Y5182_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g51820 OS=Arabidopsis thaliana GN=At1g51820 PE=2 SV=1)

HSP 1 Score: 121.324 bits (303), Expect = 2.693e-33
Identity = 65/142 (45.77%), Postives = 90/142 (63.38%), Query Frame = 3
Query:  321 RFPFVAVQEATNNFDESWVIGIGGFGKVYKGELNDGTKVAVKRGNPRSQQGLAEFQTEIEMLSQFRHRHLVSLIGYCDEKNEMILIYEYMENGTLKGHLYGS-GLPSLSWKQKLEICIGSARGLHYLHTGYAKAVIPRDVKS 743
            RF +  V   TNNF    ++G GGFG VY G +N   +VAVK  +  S QG  +F+ E+E+L +  H++LV L+GYCDE + + LIYEYM NG LK H+ G+     L+W  +L+I I SA+GL YLH G    ++ RDVK+
Sbjct:  567 RFSYSQVVIMTNNFQR--ILGKGGFGMVYHGFVNGTEQVAVKILSHSSSQGYKQFKAEVELLLRVHHKNLVGLVGYCDEGDNLALIYEYMANGDLKEHMSGTRNRFILNWGTRLKIVIESAQGLEYLHNGCKPPMVHRDVKT 706          

HSP 2 Score: 42.3578 bits (98), Expect = 2.693e-33
Identity = 21/46 (45.65%), Postives = 30/46 (65.22%), Query Frame = 1
Query:  748 NILPDENFMAKVADFGMSKTGTEIDPTHVNTALKRNLGYFDLEYFK 885
            NIL +E+F AK+ADFG+S++      THV+T +    GY D EY +
Sbjct:  708 NILLNEHFEAKLADFGLSRSFLIEGETHVSTVVAGTPGYLDPEYHR 753          
BLAST of DY259918 vs. ExPASy Swiss-Prot
Match: Y1755_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g07550 OS=Arabidopsis thaliana GN=At1g07550 PE=2 SV=1)

HSP 1 Score: 125.946 bits (315), Expect = 2.694e-33
Identity = 73/152 (48.03%), Postives = 94/152 (61.84%), Query Frame = 3
Query:  291 TTSANSNSGYRFPFVAVQEATNNFDESWVIGIGGFGKVYKGELNDGTKVAVKRGNPRSQQGLAEFQTEIEMLSQFRHRHLVSLIGYCDEKNEMILIYEYMENGTLKGHLYGS-GLPSLSWKQKLEICIGSARGLHYLHTGYAKAVIPRDVKS 743
            T S+  +   RF +  V + TNNF    VIG GGFG VY+G LN+  + A+K  +  S QG  EF+TE+E+L +  H  LVSLIGYCD+ N + LIYE M  G LK HL G  G   LSW  +L+I + SA G+ YLHTG    ++ RDVKS
Sbjct:  539 TRSSFKSENRRFTYSDVNKMTNNFQV--VIGKGGFGVVYQGCLNN-EQAAIKVLSHSSAQGYKEFKTEVELLLRVHHEKLVSLIGYCDDDNGLALIYELMGKGNLKEHLSGKPGCSVLSWPIRLKIALESAIGIEYLHTGCKPKIVHRDVKS 687          

HSP 2 Score: 37.7354 bits (86), Expect = 2.694e-33
Identity = 22/49 (44.90%), Postives = 27/49 (55.10%), Query Frame = 1
Query:  748 NILPDENFMAKVADFGMSKT---GTEIDPTHVNTALKRNLGYFDLEYFK 885
            NIL  E F AK+ADFG+S++   G E  P    T +    GY D EY K
Sbjct:  689 NILLSEEFEAKIADFGLSRSFLIGNEAQP----TVVAGTFGYLDPEYHK 733          
BLAST of DY259918 vs. ExPASy Swiss-Prot
Match: WAKLP_ARATH (Wall-associated receptor kinase-like 15 OS=Arabidopsis thaliana GN=WAKL15 PE=2 SV=2)

HSP 1 Score: 115.546 bits (288), Expect = 3.521e-33
Identity = 65/173 (37.57%), Postives = 100/173 (57.80%), Query Frame = 3
Query:  249 GNSHTMGSKYSHGTTTSANSNSGYR-FPFVAVQEATNNFDESWVIGIGGFGKVYKGELNDGTKVAVKRGNPRSQQGLAEFQTEIEMLSQFRHRHLVSLIGYCDEKNEMILIYEYMENGTLKGHLYGSG------LPSLSWKQKLEICIGSARGLHYLHTGYAKAVIPRDVKSA 746
            GN      +  H    S NS    R F    + +AT+NF +S ++G GGFG+V+KG L+DGT VAVKR    +++ + +   E+++L Q  H++LV L+G C E    +L+YE++ NGTL  H+YG G         L  +++L I   +A+GL YLH+  +  +  RDVKS+
Sbjct:  316 GNQSWASVRKLHRNLLSINSTGLDRIFTGKEIVKATDNFAKSNLLGFGGFGEVFKGNLDDGTTVAVKRAKLGNEKSIYQIVNEVQILCQVSHKNLVKLLGCCIELEMPVLVYEFVPNGTLFEHIYGGGGGGGGLYDHLPLRRRLMIAHQTAQGLDYLHSSSSPPIYHRDVKSS 488          

HSP 2 Score: 47.7506 bits (112), Expect = 3.521e-33
Identity = 24/45 (53.33%), Postives = 29/45 (64.44%), Query Frame = 1
Query:  748 NILPDENFMAKVADFGMSKTGTEIDPTHVNTALKRNLGYFDLEYF 882
            NIL DEN   KVADFG+S+ G   D +HV T  +  LGY D EY+
Sbjct:  489 NILLDENLDVKVADFGLSRLGVS-DVSHVTTCAQGTLGYLDPEYY 532          
BLAST of DY259918 vs. ExPASy Swiss-Prot
Match: Y5614_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g56140 OS=Arabidopsis thaliana GN=At1g56140 PE=1 SV=2)

HSP 1 Score: 127.487 bits (319), Expect = 5.937e-33
Identity = 65/143 (45.45%), Postives = 89/143 (62.24%), Query Frame = 3
Query:  318 YRFPFVAVQEATNNFDESWVIGIGGFGKVYKGELNDGTKVAVKRGNPRSQQGLAEFQTEIEMLSQFRHRHLVSLIGYCDEKNEMILIYEYMENGTLKGHLYGSGLPSLSWKQKLEICIGSARGLHYLHTGYAKAVIPRDVKSA 746
            Y F +  ++ AT +FD S  +G GGFG VYKG+LNDG +VAVK  +  S+QG  +F  EI  +S  +HR+LV L G C E    +L+YEY+ NG+L   L+G     L W  + EIC+G ARGL YLH      ++ RDVK++
Sbjct:  679 YTFTYSELKSATQDFDPSNKLGEGGFGPVYKGKLNDGREVAVKLLSVGSRQGKGQFVAEIVAISAVQHRNLVKLYGCCYEGEHRLLVYEYLPNGSLDQALFGEKTLHLDWSTRYEICLGVARGLVYLHEEARLRIVHRDVKAS 821          

HSP 2 Score: 35.039 bits (79), Expect = 5.937e-33
Identity = 18/47 (38.30%), Postives = 27/47 (57.45%), Query Frame = 1
Query:  748 NILPDENFMAKVADFGMSKTGTEIDPTHVNTALKRNLGYFDLEYFKR 888
            NIL D   + KV+DFG++K   +   TH++T +   +GY   EY  R
Sbjct:  822 NILLDSKLVPKVSDFGLAKLYDD-KKTHISTRVAGTIGYLAPEYAMR 867          
The following BLAST results are available for this feature:
BLAST of DY259918 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 267
Match NameE-valueIdentityDescription
PSKR1_DAUCA1.217e-3344.67Phytosulfokine receptor 1 OS=Daucus carota GN=PSKR... [more]
SIRK_ARATH1.219e-3347.48Senescence-induced receptor-like serine/threonine-... [more]
Y5188_ARATH1.219e-3345.77Probable LRR receptor-like serine/threonine-protei... [more]
TMK1_ARATH2.066e-3349.64Probable receptor protein kinase TMK1 OS=Arabidops... [more]
Y5181_ARATH2.068e-3340.88Probable LRR receptor-like serine/threonine-protei... [more]
ACCR3_ARATH2.070e-3340.36Putative serine/threonine-protein kinase-like prot... [more]
Y5182_ARATH2.693e-3345.77Probable LRR receptor-like serine/threonine-protei... [more]
Y1755_ARATH2.694e-3348.03Probable LRR receptor-like serine/threonine-protei... [more]
WAKLP_ARATH3.521e-3337.57Wall-associated receptor kinase-like 15 OS=Arabido... [more]
Y5614_ARATH5.937e-3345.45Probable LRR receptor-like serine/threonine-protei... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAP10YJ23FM1 Fruit-TF Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY259918 ID=DY259918; Name=DY259918; organism=Citrus clementina; type=EST; length=894bp
GATCTACTCTTTATGACACTTACCCTGATGCCATTCTAAATGGGCTGGAG
ATCATGAAAATGAAAAACTTGCAGGGCAGCCTCGGTAATTCGAGCTCAAA
GAAGCATGTCGGAGTTATCGTGGGAGTAACCATTGGGGTATCTGTTGCGG
CATTGTTGGCTGGAATTCTTTTTATGTTGTGCAGGAAAAGAAGACAATTG
CCACAGCTGGGACATTCAAAGGCATGGATACCTGTATCCATTAATGGAGG
AAATTCTCACACAATGGGAAGTAAATACTCTCATGGAACCACGACAAGCG
CCAATTCTAACTCGGGTTACCGCTTCCCTTTTGTTGCTGTTCAAGAAGCC
ACAAACAACTTCGACGAGAGCTGGGTTATTGGGATTGGTGGTTTTGGGAA
GGTATACAAAGGAGAGCTGAATGATGGTACAAAAGTGGCTGTTAAGAGGG
GAAACCCCCGATCCCAGCAGGGACTTGCAGAGTTCCAAACCGAGATTGAG
ATGCTGTCTCAGTTCCGGCACCGCCATCTGGTTTCATTAATTGGATATTG
TGATGAAAAGAATGAGATGATCTTGATTTATGAATATATGGAAAATGGGA
CCCTCAAGGGTCATCTCTATGGCTCCGGTCTTCCCAGCTTGAGTTGGAAG
CAGAAACTTGAGATTTGCATTGGATCTGCTAGGGGACTTCATTACCTTCA
CACTGGCTATGCCAAAGCAGTTATTCCACGTGATGTAAAGTCTGCCAAAT
ATCCTACCTGATGAGAACTTCATGGCAAAGGTTGCTGATTTTGGAATGTC
CAAAACAGGGACTGAAATTGATCCAACCCATGTGAATACGGCATTGAAAA
GAAATTTGGGGTATTTTGATCTCGAATACTTCAAAAGGCCTCAA
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