DY259918

Overview
NameDY259918
Unique NameDY259918
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length894
Libraries
Library NameType
Fruit-TFcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig1353 contig Ccv1_Contig1353:1..894. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of DY259918 vs. ExPASy Swiss-Prot
Match: APK1A_ARATH (Protein kinase APK1A, chloroplastic OS=Arabidopsis thaliana GN=APK1A PE=2 SV=1)

HSP 1 Score: 117.087 bits (292), Expect = 6.972e-31
Identity = 64/153 (41.83%), Postives = 92/153 (60.13%), Query Frame = 3
Query:  324 FPFVAVQEATNNFDESWVIGIGGFGKVYKGELND----------GTKVAVKRGNPRSQQGLAEFQTEIEMLSQFRHRHLVSLIGYCDEKNEMILIYEYMENGTLKGHLYGSGL--PSLSWKQKLEICIGSARGLHYLHTGYAKAVIPRDVKSA 746
            F F  ++ AT NF    V+G GGFG V+KG +++          G  +AVK+ N    QG  E+  E+  L QF HRHLV LIGYC E    +L+YE+M  G+L+ HL+  GL    LSWK +L++ +G+A+GL +LH+   + VI RD K++
Sbjct:   56 FSFAELKSATRNFRPDSVLGEGGFGCVFKGWIDEKSLTASRPGTGLVIAVKKLNQDGWQGHQEWLAEVNYLGQFSHRHLVKLIGYCLEDEHRLLVYEFMPRGSLENHLFRRGLYFQPLSWKLRLKVALGAAKGLAFLHSSETR-VIYRDFKTS 207          

HSP 2 Score: 38.5058 bits (88), Expect = 6.972e-31
Identity = 19/44 (43.18%), Postives = 27/44 (61.36%), Query Frame = 1
Query:  748 NILPDENFMAKVADFGMSKTGTEIDPTHVNTALKRNLGYFDLEY 879
            NIL D  + AK++DFG++K G   D +HV+T +    GY   EY
Sbjct:  208 NILLDSEYNAKLSDFGLAKDGPIGDKSHVSTRVMGTHGYAAPEY 251          
BLAST of DY259918 vs. ExPASy Swiss-Prot
Match: SERK1_ARATH (Somatic embryogenesis receptor kinase 1 OS=Arabidopsis thaliana GN=SERK1 PE=1 SV=2)

HSP 1 Score: 117.087 bits (292), Expect = 9.022e-31
Identity = 66/145 (45.52%), Postives = 86/145 (59.31%), Query Frame = 3
Query:  321 RFPFVAVQEATNNFDESWVIGIGGFGKVYKGELNDGTKVAVKR-GNPRSQQGLAEFQTEIEMLSQFRHRHLVSLIGYCDEKNEMILIYEYMENGTLKGHL--YGSGLPSLSWKQKLEICIGSARGLHYLHTGYAKAVIPRDVKSA 746
            RF    +Q A++ F    ++G GGFGKVYKG L DGT VAVKR    R+  G  +FQTE+EM+S   HR+L+ L G+C    E +L+Y YM NG++   L       P L W  +  I +GSARGL YLH      +I RDVK+A
Sbjct:  289 RFSLRELQVASDGFSNKNILGRGGFGKVYKGRLADGTLVAVKRLKEERTPGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPPSQPPLDWPTRKRIALGSARGLSYLHDHCDPKIIHRDVKAA 433          

HSP 2 Score: 38.1206 bits (87), Expect = 9.022e-31
Identity = 20/44 (45.45%), Postives = 27/44 (61.36%), Query Frame = 1
Query:  748 NILPDENFMAKVADFGMSKTGTEIDPTHVNTALKRNLGYFDLEY 879
            NIL DE F A V DFG++K   +   THV TA++  +G+   EY
Sbjct:  434 NILLDEEFEAVVGDFGLAKL-MDYKDTHVTTAVRGTIGHIAPEY 476          
BLAST of DY259918 vs. ExPASy Swiss-Prot
Match: ACCR4_ARATH (Serine/threonine-protein kinase-like protein CCR4 OS=Arabidopsis thaliana GN=CCR4 PE=1 SV=1)

HSP 1 Score: 111.309 bits (277), Expect = 3.369e-30
Identity = 59/145 (40.69%), Postives = 86/145 (59.31%), Query Frame = 3
Query:  348 ATNNFDESWVIGIGGFGKVYKGELNDGTKVAVKRG---NP---------RSQQGLAEFQTEIEMLSQFRHRHLVSLIGYCDEKNEMILIYEYMENGTLKGHLYGSGLPSLSWKQKLEICIGSARGLHYLHTGYAKAVIPRDVKSA 746
            AT+ F   + +GIG FG VY+G L+DG  VA+KR    NP         R     + F  E+E +S+  H++LV L+G+ ++  E IL+YEYM+NG+L  HL+      LSW+ +L I + +ARG+ YLH      VI RD+KS+
Sbjct:  439 ATDGFSVRFHLGIGSFGSVYQGVLSDGRHVAIKRAELTNPTLSGTTMRHRRADKDSAFVNELESMSRLNHKNLVRLLGFYEDTEERILVYEYMKNGSLADHLHNPQFDPLSWQTRLMIALDAARGIQYLHEFIVPPVIHRDIKSS 583          

HSP 2 Score: 41.9726 bits (97), Expect = 3.369e-30
Identity = 23/51 (45.10%), Postives = 31/51 (60.78%), Query Frame = 1
Query:  748 NILPDENFMAKVADFGMSKTG--TEIDPTHVNTALKRNLGYFDLEYFKRPQ 894
            NIL D  + AKV+DFG+S+ G   E D +H++      LGY D EY+K  Q
Sbjct:  584 NILLDATWTAKVSDFGLSQMGPTEEDDVSHLSLHAAGTLGYIDPEYYKFQQ 634          
BLAST of DY259918 vs. ExPASy Swiss-Prot
Match: CRI4_MAIZE (Putative receptor protein kinase CRINKLY4 OS=Zea mays GN=CR4 PE=2 SV=1)

HSP 1 Score: 114.775 bits (286), Expect = 4.375e-30
Identity = 58/146 (39.73%), Postives = 91/146 (62.33%), Query Frame = 3
Query:  324 FPFVAVQEATNNFDESWVIGIGGFGKVYKGELNDGTKVAVKRGNPRS--QQGLAEFQTEIEMLSQFRHRHLVSLIGYCDEKNEMILIYEYMENGTLKGHLYGSG---LPSLSWKQKLEICIGSARGLHYLHTGYAKAVIPRDVKSA 746
            F +  +++AT  F E   +G G F  V+KG L DGT VAVKR    S  ++   EF  E+++LS+  H HL++L+GYC++ +E +L+YE+M +G+L  HL+G        L+W +++ I + +ARG+ YLH      VI RD+KS+
Sbjct:  493 FSYEELEQATGGFSEDSQVGKGSFSCVFKGILRDGTVVAVKRAIKASDVKKSSKEFHNELDLLSRLNHAHLLNLLGYCEDGSERLLVYEFMAHGSLYQHLHGKDPNLKKRLNWARRVTIAVQAARGIEYLHGYACPPVIHRDIKSS 638          

HSP 2 Score: 38.1206 bits (87), Expect = 4.375e-30
Identity = 20/46 (43.48%), Postives = 27/46 (58.70%), Query Frame = 1
Query:  748 NILPDENFMAKVADFGMSKTGTEIDPTHVNTALKRNLGYFDLEYFK 885
            NIL DE+  A+VADFG+S  G     T ++      LGY D EY++
Sbjct:  639 NILIDEDHNARVADFGLSILGPADSGTPLSELPAGTLGYLDPEYYR 684          
BLAST of DY259918 vs. ExPASy Swiss-Prot
Match: RLK6_ARATH (Receptor-like protein kinase At3g21340 OS=Arabidopsis thaliana GN=At3g21340 PE=1 SV=1)

HSP 1 Score: 131.339 bits (329), Expect = 7.094e-30
Identity = 75/180 (41.67%), Postives = 107/180 (59.44%), Query Frame = 3
Query:  246 GGNSHTMGSKY-SHGTTTSANSNSGYRFPFVAVQEATNNFDESWVIGIGGFGKVYKGELNDGTKVAVKRGNPRSQQGLAEFQTEIEMLSQFRHRHLVSLIGYCDEKNEMILIYEYMENGTLKGHLYGS-GLPSLSWKQKLEICIGSARGLHYLHTGYAKAVIPRDVKSAKYPT**ELHGK 779
            G +S+T  S+  +  ++ SA      RF +  V   TNNF+   V+G GGFG VY G +N+  +VAVK  +  S QG  EF+ E+E+L +  H++LV L+GYCDE   + LIYEYM NG L+ H+ G  G   L+W+ +L+I + SA+GL YLH G    ++ RDVK+        LH K
Sbjct:  555 GPSSYTQVSEVRTIRSSESAIMTKNRRFTYSEVVTMTNNFER--VLGKGGFGMVYHGTVNNTEQVAVKMLSHSSSQGYKEFKAEVELLLRVHHKNLVGLVGYCDEGENLALIYEYMANGDLREHMSGKRGGSILNWETRLKIVVESAQGLEYLHNGCKPPMVHRDVKTTNILLNEHLHAK 732          
BLAST of DY259918 vs. ExPASy Swiss-Prot
Match: CRK7_ARATH (Cysteine-rich receptor-like protein kinase 7 OS=Arabidopsis thaliana GN=CRK7 PE=2 SV=1)

HSP 1 Score: 121.324 bits (303), Expect = 7.449e-30
Identity = 65/165 (39.39%), Postives = 102/165 (61.82%), Query Frame = 3
Query:  270 SKYSHGTTTSANSNS-----GYRFPFVAVQEATNNFDESWVIGIGGFGKVYKGELNDGTKVAVKRGNPRSQQGLAEFQTEIEMLSQFRHRHLVSLIGYCDEKNEMILIYEYMENGTLKGHLYGSGLP-SLSWKQKLEICIGSARGLHYLHTGYAKAVIPRDVKSA 746
            +K ++GTT + + +        +  + A+Q ATN+F E+  IG GGFG VYKG  ++GT+VAVKR +  S+QG  EF+ E+ +++  RH++LV ++G+  E+ E IL+YEY+EN +L   L+       L W Q+  I  G ARG+ YLH      +I RD+K++
Sbjct:  301 AKKTYGTTPALDEDDKTTIESLQLDYRAIQAATNDFSENNKIGRGGFGDVYKGTFSNGTEVAVKRLSKTSEQGDTEFKNEVVVVANLRHKNLVRILGFSIEREERILVYEYVENKSLDNFLFDPAKKGQLYWTQRYHIIGGIARGILYLHQDSRLTIIHRDLKAS 465          

HSP 2 Score: 30.8018 bits (68), Expect = 7.449e-30
Identity = 20/50 (40.00%), Postives = 27/50 (54.00%), Query Frame = 1
Query:  748 NILPDENFMAKVADFGMSKTGTEIDPTHVNTA-LKRNLGYFDLEYFKRPQ 894
            NIL D +   K+ADFGM++    +D T  NT+ +    GY   EY  R Q
Sbjct:  466 NILLDADMNPKIADFGMARI-FGMDQTQQNTSRIVGTYGYMSPEYAMRGQ 514          
BLAST of DY259918 vs. ExPASy Swiss-Prot
Match: BRI1_SOLPE (Systemin receptor SR160 OS=Solanum peruvianum PE=1 SV=1)

HSP 1 Score: 115.931 bits (289), Expect = 1.631e-29
Identity = 68/181 (37.57%), Postives = 101/181 (55.80%), Query Frame = 3
Query:  276 YSHGTTTSANSNSGYRFP---------------------FVAVQEATNNFDESWVIGIGGFGKVYKGELNDGTKVAVKRGNPRSQQGLAEFQTEIEMLSQFRHRHLVSLIGYCDEKNEMILIYEYMENGTLKGHLYG---SGLPSLSWKQKLEICIGSARGLHYLHTGYAKAVIPRDVKSA 746
            Y  G + SA +NS ++F                      F  + EATN F    ++G GGFG VYK +L DG+ VA+K+    S QG  EF  E+E + + +HR+LV L+GYC    E +L+YEYM+ G+L+  L+    +G+  L+W  + +I IG+ARGL +LH      +I RD+KS+
Sbjct:  839 YMDGHSHSATANSAWKFTSAREALSINLAAFEKPLRKLTFADLLEATNGFHNDSLVGSGGFGDVYKAQLKDGSVVAIKKLIHVSGQGDREFTAEMETIGKIKHRNLVPLLGYCKVGEERLLVYEYMKYGSLEDVLHDRKKTGI-KLNWPARRKIAIGAARGLAFLHHNCIPHIIHRDMKSS 1018          

HSP 2 Score: 35.039 bits (79), Expect = 1.631e-29
Identity = 19/47 (40.43%), Postives = 31/47 (65.96%), Query Frame = 1
Query:  748 NILPDENFMAKVADFGMSKTGTEIDPTHVN-TALKRNLGYFDLEYFK 885
            N+L DEN  A+V+DFGM++  + +D TH++ + L    GY   EY++
Sbjct: 1019 NVLLDENLEARVSDFGMARLMSAMD-THLSVSTLAGTPGYVPPEYYQ 1064          
BLAST of DY259918 vs. ExPASy Swiss-Prot
Match: RLCK7_ARATH (Probable serine/threonine-protein kinase RLCKVII OS=Arabidopsis thaliana GN=At1g07870 PE=2 SV=1)

HSP 1 Score: 111.309 bits (277), Expect = 1.655e-29
Identity = 61/142 (42.96%), Postives = 85/142 (59.86%), Query Frame = 3
Query:  324 FPFVAVQEATNNFDESWVIGIGGFGKVYKGELNDGTKV-AVKRGNPRSQQGLAEFQTEIEMLSQFRHRHLVSLIGYCDEKNEMILIYEYMENGTLKGHLY--GSGLPSLSWKQKLEICIGSARGLHYLHTGYAKAVIPRDVK 740
            F F  + EAT NF     +G GGFGKV+KG +    +V A+K+ +    QG+ EF  E+  LS   H +LV LIG+C E ++ +L+YEYM  G+L+ HL+   SG   L W  +++I  G+ARGL YLH      VI RD+K
Sbjct:   91 FTFQELAEATGNFRSDCFLGEGGFGKVFKGTIEKLDQVVAIKQLDRNGVQGIREFVVEVLTLSLADHPNLVKLIGFCAEGDQRLLVYEYMPQGSLEDHLHVLPSGKKPLDWNTRMKIAAGAARGLEYLHDRMTPPVIYRDLK 232          

HSP 2 Score: 39.6614 bits (91), Expect = 1.655e-29
Identity = 18/44 (40.91%), Postives = 27/44 (61.36%), Query Frame = 1
Query:  748 NILPDENFMAKVADFGMSKTGTEIDPTHVNTALKRNLGYFDLEY 879
            NIL  E++  K++DFG++K G   D THV+T +    GY   +Y
Sbjct:  235 NILLGEDYQPKLSDFGLAKVGPSGDKTHVSTRVMGTYGYCAPDY 278          
BLAST of DY259918 vs. ExPASy Swiss-Prot
Match: BRI1_SOLLC (Brassinosteroid LRR receptor kinase OS=Solanum lycopersicum GN=CURL3 PE=1 SV=1)

HSP 1 Score: 115.161 bits (287), Expect = 2.764e-29
Identity = 68/181 (37.57%), Postives = 100/181 (55.25%), Query Frame = 3
Query:  276 YSHGTTTSANSNSGYRFP---------------------FVAVQEATNNFDESWVIGIGGFGKVYKGELNDGTKVAVKRGNPRSQQGLAEFQTEIEMLSQFRHRHLVSLIGYCDEKNEMILIYEYMENGTLKGHLYGS---GLPSLSWKQKLEICIGSARGLHYLHTGYAKAVIPRDVKSA 746
            Y  G + SA +NS ++F                      F  + EATN F    ++G GGFG VYK +L DG+ VA+K+    S QG  EF  E+E + + +HR+LV L+GYC    E +L+YEYM+ G+L+  L+     G+  L+W  + +I IG+ARGL +LH      +I RD+KS+
Sbjct:  839 YMDGHSHSATANSAWKFTSAREALSINLAAFEKPLRKLTFADLLEATNGFHNDSLVGSGGFGDVYKAQLKDGSVVAIKKLIHVSGQGDREFTAEMETIGKIKHRNLVPLLGYCKVGEERLLVYEYMKYGSLEDVLHDRKKIGI-KLNWPARRKIAIGAARGLAFLHHNCIPHIIHRDMKSS 1018          

HSP 2 Score: 35.039 bits (79), Expect = 2.764e-29
Identity = 19/47 (40.43%), Postives = 31/47 (65.96%), Query Frame = 1
Query:  748 NILPDENFMAKVADFGMSKTGTEIDPTHVN-TALKRNLGYFDLEYFK 885
            N+L DEN  A+V+DFGM++  + +D TH++ + L    GY   EY++
Sbjct: 1019 NVLLDENLEARVSDFGMARLMSAMD-THLSVSTLAGTPGYVPPEYYQ 1064          
BLAST of DY259918 vs. ExPASy Swiss-Prot
Match: PSYR1_ARATH (Tyrosine-sulfated glycopeptide receptor 1 OS=Arabidopsis thaliana GN=PSYR1 PE=2 SV=1)

HSP 1 Score: 112.079 bits (279), Expect = 2.768e-29
Identity = 69/204 (33.82%), Postives = 111/204 (54.41%), Query Frame = 3
Query:  150 ALLAGILFMLCRKRRQLPQLGHSKAWIPVSINGGNSHTMGSKYSHGTTTSANSNSGYRFPFVAVQE---ATNNFDESWVIGIGGFGKVYKGELNDGTKVAVKRGNPRSQQGLAEFQTEIEMLSQFRHRHLVSLIGYCDEKNEMILIYEYMENGTLKGHLYGS--GLPSLSWKQKLEICIGSARGLHYLHTGYAKAVIPRDVKSA 746
            +L+  +L +L   +R++       A + ++ NG  S          +      NS Y    + + E   AT+NF ++ +IG GGFG VYK  L++GTK+AVK+          EF+ E+E+LS+ +H +LV+L GYC   +  ILIY +MENG+L   L+ +  G   L W ++L I  G++ GL Y+H      ++ RD+KS+
Sbjct:  730 SLILVLLALLVLSKRRVNPGDSENAELEINSNGSYSEVPPGSDKDISLVLLFGNSRYEVKDLTIFELLKATDNFSQANIIGCGGFGLVYKATLDNGTKLAVKKLTGDYGMMEKEFKAEVEVLSRAKHENLVALQGYCVHDSARILIYSFMENGSLDYWLHENPEGPAQLDWPKRLNIMRGASSGLAYMHQICEPHIVHRDIKSS 933          

HSP 2 Score: 38.1206 bits (87), Expect = 2.768e-29
Identity = 25/46 (54.35%), Postives = 27/46 (58.70%), Query Frame = 1
Query:  748 NILPDENFMAKVADFGMSKTGTEIDP--THVNTALKRNLGYFDLEY 879
            NIL D NF A VADFG+S+    I P  THV T L   LGY   EY
Sbjct:  934 NILLDGNFKAYVADFGLSRL---ILPYRTHVTTELVGTLGYIPPEY 976          
The following BLAST results are available for this feature:
BLAST of DY259918 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 267
Match NameE-valueIdentityDescription
APK1A_ARATH6.972e-3141.83Protein kinase APK1A, chloroplastic OS=Arabidopsis... [more]
SERK1_ARATH9.022e-3145.52Somatic embryogenesis receptor kinase 1 OS=Arabido... [more]
ACCR4_ARATH3.369e-3040.69Serine/threonine-protein kinase-like protein CCR4 ... [more]
CRI4_MAIZE4.375e-3039.73Putative receptor protein kinase CRINKLY4 OS=Zea m... [more]
RLK6_ARATH7.094e-3041.67Receptor-like protein kinase At3g21340 OS=Arabidop... [more]
CRK7_ARATH7.449e-3039.39Cysteine-rich receptor-like protein kinase 7 OS=Ar... [more]
BRI1_SOLPE1.631e-2937.57Systemin receptor SR160 OS=Solanum peruvianum PE=1... [more]
RLCK7_ARATH1.655e-2942.96Probable serine/threonine-protein kinase RLCKVII O... [more]
BRI1_SOLLC2.764e-2937.57Brassinosteroid LRR receptor kinase OS=Solanum lyc... [more]
PSYR1_ARATH2.768e-2933.82Tyrosine-sulfated glycopeptide receptor 1 OS=Arabi... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAP10YJ23FM1 Fruit-TF Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY259918 ID=DY259918; Name=DY259918; organism=Citrus clementina; type=EST; length=894bp
GATCTACTCTTTATGACACTTACCCTGATGCCATTCTAAATGGGCTGGAG
ATCATGAAAATGAAAAACTTGCAGGGCAGCCTCGGTAATTCGAGCTCAAA
GAAGCATGTCGGAGTTATCGTGGGAGTAACCATTGGGGTATCTGTTGCGG
CATTGTTGGCTGGAATTCTTTTTATGTTGTGCAGGAAAAGAAGACAATTG
CCACAGCTGGGACATTCAAAGGCATGGATACCTGTATCCATTAATGGAGG
AAATTCTCACACAATGGGAAGTAAATACTCTCATGGAACCACGACAAGCG
CCAATTCTAACTCGGGTTACCGCTTCCCTTTTGTTGCTGTTCAAGAAGCC
ACAAACAACTTCGACGAGAGCTGGGTTATTGGGATTGGTGGTTTTGGGAA
GGTATACAAAGGAGAGCTGAATGATGGTACAAAAGTGGCTGTTAAGAGGG
GAAACCCCCGATCCCAGCAGGGACTTGCAGAGTTCCAAACCGAGATTGAG
ATGCTGTCTCAGTTCCGGCACCGCCATCTGGTTTCATTAATTGGATATTG
TGATGAAAAGAATGAGATGATCTTGATTTATGAATATATGGAAAATGGGA
CCCTCAAGGGTCATCTCTATGGCTCCGGTCTTCCCAGCTTGAGTTGGAAG
CAGAAACTTGAGATTTGCATTGGATCTGCTAGGGGACTTCATTACCTTCA
CACTGGCTATGCCAAAGCAGTTATTCCACGTGATGTAAAGTCTGCCAAAT
ATCCTACCTGATGAGAACTTCATGGCAAAGGTTGCTGATTTTGGAATGTC
CAAAACAGGGACTGAAATTGATCCAACCCATGTGAATACGGCATTGAAAA
GAAATTTGGGGTATTTTGATCTCGAATACTTCAAAAGGCCTCAA
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