DY259923
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DY259923 vs. ExPASy Swiss-Prot
Match: TCPB_YEAST (T-complex protein 1 subunit beta OS=Saccharomyces cerevisiae GN=CCT2 PE=1 SV=1) HSP 1 Score: 81.2629 bits (199), Expect = 3.948e-18 Identity = 47/152 (30.92%), Postives = 79/152 (51.97%), Query Frame = 2 Query: 11 VGVSAIRRLRKTDNNRIAKACGAVIVNTPDELQESDVGTGAGLFEVKKIGDEFFAFIVDCKDPKACTVLLRGASKDLLNDVERNLRDAMSVARNIINNPKLVPGGGATELTVSATLKQKSSSIEGLEKWPYEAAAIAFEAIPRTLAHNCGIN 466 +G+++I R+A G +V+T DE + +G + E +G++ F CK +ACT++LRGA+ L++ ER+L DA+SV + V GGG E+ +S + ++ +I+G + EA A A +P LA N G + Sbjct: 301 LGINSIEHADFEGVERLALVTGGEVVSTFDEPSKCKLGE-CDVIEEIMLGEQPFLKFSGCKAGEACTIVLRGATDQTLDEAERSLHDALSVLSQTTKETRTVLGGGCAEMVMSKAVDTEAQNIDGKKSLAVEAFARALRQLPTILADNAGFD 451 HSP 2 Score: 31.5722 bits (70), Expect = 3.948e-18 Identity = 17/44 (38.64%), Postives = 28/44 (63.64%), Query Frame = 3 Query: 528 GIDGNPGAISDMKQQKIRDPHHANAPPLNTAIEAACMLLKNDDI 659 G+D N G I+DM+Q I + + +++A EAA +LL+ D+I Sbjct: 471 GLDLNNGTIADMRQLGIVESYKLKRAVVSSASEAAEVLLRVDNI 514
BLAST of DY259923 vs. ExPASy Swiss-Prot
Match: TCPW_MOUSE (T-complex protein 1 subunit zeta-2 OS=Mus musculus GN=Cct6b PE=2 SV=4) HSP 1 Score: 92.4337 bits (228), Expect = 4.279e-18 Identity = 51/161 (31.68%), Postives = 88/161 (54.66%), Query Frame = 2 Query: 17 VSAIRRLRKTDNNRIAKACGAVIVNTPDELQESDVGTGAGLFEVKKIGDEFFAFIVDCKDPKACTVLLRGASKDLLNDVERNLRDAMSVARNIINNPKLVPGGGATELTVSATLKQKSSSIEGLEKWPYEAAAIAFEAIPRTLAHNCGINVFRTMTALARK 499 + A+RR ++ + R+ ACG + VN+ + L E +G +FE +G+E F FI DC +P + T+L++G +K L ++ LRD + +N I + +VPG GA E+ ++ L ++G + +A A A IP+ LA N G ++ T+ + K Sbjct: 310 IVALRRAKRRNLERLTLACGGLAVNSFEGLSEECLGHAGLVFEYA-LGEEKFTFIEDCVNPLSVTLLVKGPNKHTLIQIKDALRDGLRAVKNAIEDGCVVPGAGAVEVAIAEALVNYKHRVQGRVRLGIQAFADALLIIPKVLAQNSGYDLQETLIKIQTK 469
BLAST of DY259923 vs. ExPASy Swiss-Prot
Match: TCPW_HUMAN (T-complex protein 1 subunit zeta-2 OS=Homo sapiens GN=CCT6B PE=1 SV=4) HSP 1 Score: 92.4337 bits (228), Expect = 4.279e-18 Identity = 52/156 (33.33%), Postives = 89/156 (57.05%), Query Frame = 2 Query: 14 GVSAIRRLRKTDNNRIAKACGAVIVNTPDELQESDVGTGAGLFEVKKIGDEFFAFIVDCKDPKACTVLLRGASKDLLNDVERNLRDAMSVARNIINNPKLVPGGGATELTVSATLKQKSSSIEGLEKWPYEAAAIAFEAIPRTLAHNCGINVFRTM 481 G+ A+RR ++ + R++ ACG + VN+ ++L +G AGL +G+E F FI +C +P + T+L++G +K L V+ +RD + +N I + +VPG GA E+ ++ L +SI+G + +A A A IP+ LA N G + T+ Sbjct: 309 GIVALRRAKRRNMERLSLACGGMAVNSFEDLTVDCLGH-AGLVYEYTLGEEKFTFIEECVNPCSVTLLVKGPNKHTLTQVKDAIRDGLRAIKNAIEDGCMVPGAGAIEVAMAEALVTYKNSIKGRARLGVQAFADALLIIPKVLAQNAGYDPQETL 463
BLAST of DY259923 vs. ExPASy Swiss-Prot
Match: THS2_HALVO (Thermosome subunit 2 OS=Halobacterium volcanii GN=cct2 PE=2 SV=1) HSP 1 Score: 86.2705 bits (212), Expect = 5.128e-18 Identity = 50/166 (30.12%), Postives = 92/166 (55.42%), Query Frame = 2 Query: 14 GVSAIRRLRKTDNNRIAKACGAVIVNTPDELQESDVGTGA-------GLFEVKKIGDEFFAFIVDCKDPKACTVLLRGASKDLLNDVERNLRDAMSVARNIINNPKLVPGGGATELTVSATLKQKSSSIEGLEKWPYEAAAIAFEAIPRTLAHNCGINVFRTMTAL 490 G+ A+RR +K+D + GA +V+ D ++ + +G + LF V+ IGD D T+LLRG++ +++++ER ++DA+ V + + + +++ GGGA E+ +++ L+ + S+ G E+ EA A A E +PR LA N G++ T+ L Sbjct: 312 GILAVRRTKKSDIRFLKNITGAAVVSDLDSIEAAVLGRASVRRDEAGELFYVEGIGD----------DVHGVTLLLRGSTDHVVDELERGVQDALDVVASTVADGRVLAGGGAIEVELASRLRNYADSVSGREQLAVEAYADALELVPRVLAENAGLDSIDTLVDL 467 HSP 2 Score: 26.1794 bits (56), Expect = 5.128e-18 Identity = 17/57 (29.82%), Postives = 28/57 (49.12%), Query Frame = 3 Query: 489 LQGKHANGANAWIGIDGNPGAISDMKQQKIRDPHHANAPPLNTAIEAACMLLKNDDI 659 L+ H +G G++ G + D + + HA + +A EAA ++LK DDI Sbjct: 467 LRAAHEDG-QVRAGLNVFTGEVEDAFDAGVVETAHAKEQAVASASEAANLVLKIDDI 522
BLAST of DY259923 vs. ExPASy Swiss-Prot
Match: TCPZ_CAEEL (T-complex protein 1 subunit zeta OS=Caenorhabditis elegans GN=cct-6 PE=1 SV=1) HSP 1 Score: 91.6633 bits (226), Expect = 7.299e-18 Identity = 52/163 (31.90%), Postives = 88/163 (53.99%), Query Frame = 2 Query: 2 LITVGVSAIRRLRKTDNNRIAKACGAVIVNTPDELQESDVGTGAGLFEVKKIGDEFFAFIVDCKDPKACTVLLRGASKDLLNDVERNLRDAMSVARNIINNPKLVPGGGATELTVSATLKQKSSSIEGLEKWPYEAAAIAFEAIPRTLAHNCGINVFRTMTAL 490 L + G+ A+RR ++ + R+ A G VN+ D+L D+G AGL +G+E + FI +C+ PK+ T+L++G +K + ++ + D + N I + ++PG A E+ LK+ +++G K EA A A IP+TLA N G + T+ L Sbjct: 309 LASEGILALRRAKRRNMERLQLAVGGEAVNSVDDLTPEDLGW-AGLVYEHSLGEEKYTFIEECRAPKSVTLLIKGPNKHTITQIKDAIHDGLRAVFNTIVDKAVLPGAAAFEIAAYVMLKKDVENLKGRAKLGAEAFAQALLVIPKTLAVNGGYDAQETLVKL 470
BLAST of DY259923 vs. ExPASy Swiss-Prot
Match: TCPE_MOUSE (T-complex protein 1 subunit epsilon OS=Mus musculus GN=Cct5 PE=1 SV=1) HSP 1 Score: 87.4261 bits (215), Expect = 8.674e-18 Identity = 54/163 (33.13%), Postives = 89/163 (54.60%), Query Frame = 2 Query: 2 LITVGVSAIRRLRKTDNNRIAKACGAVIVNTPDELQESDVGTGAGLFEVKKIGD--EFFAFIVDCKDPKACTVLLRGASKDLLNDVERNLRDAMSVARNIINNPKLVPGGGATELTVSATLKQKSSSIEGLEKWPYEAAAIAFEAIPRTLAHNCGINVFRTMT 484 L+ G+ A+R + + IA A G IV EL +G AG+ + G + I CK+ +A T+ +RG +K ++ + +R+L DA+ V RN+I + ++V GGGA E++ + + Q++ LE++ A A A E IP L+ N G+N +TMT Sbjct: 314 LLQNGLPAVRWVGGPEIELIAIATGGRIVPRFSELTSEKLGF-AGVVQEISFGTTKDKMLVIEKCKNSRAVTIFIRGGNKMIIEEAKRSLHDALCVIRNLIRDNRVVYGGGAAEISCALAVSQEADKCPTLEQYAMRAFADALEVIPMALSENSGMNPIQTMT 475 HSP 2 Score: 24.2534 bits (51), Expect = 8.674e-18 Identity = 14/57 (24.56%), Postives = 27/57 (47.37%), Query Frame = 3 Query: 489 LQGKHANGANAWIGIDGNPGAISDMKQQKIRDPHHANAPPLNTAIEAACMLLKNDDI 659 ++ + +N +GID +DM+ Q + + ++ A + M+LK DDI Sbjct: 477 VRARQVKESNPALGIDCLHKGSNDMQYQHVIETLIGKKQQISLATQMVRMILKIDDI 533
BLAST of DY259923 vs. ExPASy Swiss-Prot
Match: TCPE_RAT (T-complex protein 1 subunit epsilon OS=Rattus norvegicus GN=Cct5 PE=1 SV=1) HSP 1 Score: 87.0409 bits (214), Expect = 1.128e-17 Identity = 52/162 (32.10%), Postives = 87/162 (53.70%), Query Frame = 2 Query: 2 LITVGVSAIRRLRKTDNNRIAKACGAVIVNTPDELQESDVGTGAGLFEVK-KIGDEFFAFIVDCKDPKACTVLLRGASKDLLNDVERNLRDAMSVARNIINNPKLVPGGGATELTVSATLKQKSSSIEGLEKWPYEAAAIAFEAIPRTLAHNCGINVFRTMT 484 L+ G+ A+R + + IA A G IV EL +G + E+ + I CK+ +A T+ +RG +K ++ + +R+L DA+ V RN+I + ++V GGGA E++ + + Q++ LE++ A A A E IP L+ N G+N +TMT Sbjct: 314 LLQNGLPAVRWVGGPEIELIAIATGGRIVPRFSELTSEKLGFAGVVREISFGTTKDKMLVIEQCKNSRAVTIFIRGGNKMIIEEAKRSLHDALCVIRNLIRDNRVVYGGGAAEISCALAVSQEADKCPTLEQYAMRAFADALEVIPMALSENSGMNPIQTMT 475 HSP 2 Score: 24.2534 bits (51), Expect = 1.128e-17 Identity = 14/57 (24.56%), Postives = 27/57 (47.37%), Query Frame = 3 Query: 489 LQGKHANGANAWIGIDGNPGAISDMKQQKIRDPHHANAPPLNTAIEAACMLLKNDDI 659 ++ + +N +GID +DM+ Q + + ++ A + M+LK DDI Sbjct: 477 VRARQVKESNPALGIDCLHKGSNDMQYQHVIETLIGKKQQISLATQMVRMILKIDDI 533
BLAST of DY259923 vs. ExPASy Swiss-Prot
Match: TCPD_CAEEL (T-complex protein 1 subunit delta OS=Caenorhabditis elegans GN=cct-4 PE=2 SV=1) HSP 1 Score: 77.0258 bits (188), Expect = 1.128e-17 Identity = 46/164 (28.05%), Postives = 85/164 (51.83%), Query Frame = 2 Query: 2 LITVGVSAIRRLRKTDNNRIAKACGAVIVNTPDELQESDVGTGAGLFEVKKIGDEFFAFIVDCKDP-KACTVLLRGASKDLLNDVERNLRDAMSVARNIINNPKLVPGGGATELTVSATLKQKSSSIEGLEKWPYEAAAIAFEAIPRTLAHNCGINVFRTMTAL 490 L + + I+ + + D ++ G V + D +G + E+ GD + ++P A ++LLRG++K +L + +R++ DA+ V R ++ L+PGGGA E+ ++ L+ + + G ++ + A A A E IP TLA N G++ T+T L Sbjct: 317 LAKMKIMCIKDIEREDIEFYSRILGCRPVASVDHFNADALGYADLVEEIPTGGDGKVIKVTGVQNPGHAVSILLRGSNKLVLEEADRSIHDALCVIRCLVKKKALLPGGGAPEMEIAVKLRNLAQTQHGATQYCWRAFADALELIPYTLAENAGLSPIHTVTEL 480 HSP 2 Score: 34.2686 bits (77), Expect = 1.128e-17 Identity = 19/57 (33.33%), Postives = 30/57 (52.63%), Query Frame = 3 Query: 489 LQGKHANGANAWIGIDGNPGAISDMKQQKIRDPHHANAPPLNTAIEAACMLLKNDDI 659 L+ HANG N+ G++ G ++DM ++ + P A + A E +LK DDI Sbjct: 480 LRNNHANG-NSSYGVNVRKGYVTDMVEEDVVQPLLVTASAIKQASECVRSILKIDDI 535
BLAST of DY259923 vs. ExPASy Swiss-Prot
Match: TCPZ_CHICK (T-complex protein 1 subunit zeta OS=Gallus gallus GN=CCT6 PE=1 SV=3) HSP 1 Score: 90.8929 bits (224), Expect = 1.245e-17 Identity = 48/156 (30.77%), Postives = 87/156 (55.77%), Query Frame = 2 Query: 14 GVSAIRRLRKTDNNRIAKACGAVIVNTPDELQESDVGTGAGLFEVKKIGDEFFAFIVDCKDPKACTVLLRGASKDLLNDVERNLRDAMSVARNIINNPKLVPGGGATELTVSATLKQKSSSIEGLEKWPYEAAAIAFEAIPRTLAHNCGINVFRTM 481 G+ A+RR ++ + R+ ACG +N+ ++L +G AGL +G+E + FI C +P++ T+L+RG +K L ++ +RD + +N I + ++PG GA E+ V+ L + +++G + +A A A IP+ LA N G + T+ Sbjct: 308 GIVALRRAKRRNMERLTLACGGTAMNSVEDLTPDCLGH-AGLVYEYTLGEEKYTFIEKCDNPRSVTLLIRGPNKHTLTQIKDAVRDGLRAVKNAIEDGCVIPGAGALEVAVANALVKHKPNVKGRAQLGVQAFADALLIIPKVLAQNSGYDPQETL 462
BLAST of DY259923 vs. ExPASy Swiss-Prot
Match: TCPA_PALPA (T-complex protein 1 subunit alpha OS=Paleosuchus palpebrosus GN=TCP1 PE=2 SV=1) HSP 1 Score: 78.9518 bits (193), Expect = 1.465e-17 Identity = 50/172 (29.07%), Postives = 90/172 (52.33%), Query Frame = 2 Query: 5 ITVGVSAIRRLRKTDNNRIAKACGAVIVNTPDELQESDVGTGAGLFEVK-----KIGDEFFAFIVDCKDPKACTVLLRGASKDLLNDVERNLRDAMSVARNIINNPKLVPGGGATELTVSATLKQKSSSIEGLEKWPYEAAAIAFEAIPRTLAHNCGINVFRTMTALARKTR 505 + G A+RR+ K D RIAKA GA + +T L+ + + L + + ++ D+ I + K + +++LRGA+ + +++ER++ DA+ V + ++ + +VPGGGA E +S L+ ++S+ E+ A + IP TLA +N + T L K R Sbjct: 304 VDAGAMAVRRVLKKDLKRIAKASGATVCSTLANLEGEESFEASMLGQAEEVVQERVCDDELILIKNTKARTSASIILRGANDFMCDEMERSIHDALCVVKRVLESKSVVPGGGAVEAALSIYLENYATSMGSREQLAIAEFARSLLIIPNTLA----VNAAQDATDLVAKLR 471 HSP 2 Score: 31.9574 bits (71), Expect = 1.465e-17 Identity = 18/49 (36.73%), Postives = 24/49 (48.98%), Query Frame = 3 Query: 522 WIGIDGNPGAISDMKQQKIRDPHHANAPPLNTAIEAACMLLKNDDICPL 668 WIG+D G D KQ + +P L A EAA +L+ DD+ L Sbjct: 488 WIGLDLINGKPRDNKQAGVFEPTLVKTKSLKFATEAAITILRIDDLIKL 536 The following BLAST results are available for this feature:
BLAST of DY259923 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 141
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Sequences
The
following sequences are available for this feature:
EST sequence >DY259923 ID=DY259923; Name=DY259923; organism=Citrus clementina; type=EST; length=993bpback to top |