DY259923
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DY259923 vs. ExPASy Swiss-Prot
Match: TCPA1_MOUSE (T-complex protein 1 subunit alpha A OS=Mus musculus GN=Tcp1 PE=1 SV=2) HSP 1 Score: 78.5666 bits (192), Expect = 1.905e-17 Identity = 54/178 (30.34%), Postives = 89/178 (50.00%), Query Frame = 2 Query: 5 ITVGVSAIRRLRKTDNNRIAKACGAVIVNTPDELQESDVGTGAGLFEVKKIG-----------DEFFAFIVDCKDPKACTVLLRGASKDLLNDVERNLRDAMSVARNIINNPKLVPGGGATELTVSATLKQKSSSIEGLEKWPYEAAAIAFEAIPRTLAHNCGINVFRTMTALARKTR 505 + G A+RR+ K D +AKA GA I++T L+ G FEV +G D+ I + K + +++LRGA+ + +++ER+L DA+ V + ++ + +VPGGGA E +S L+ ++S+ E+ A + IP TLA +N + T L K R Sbjct: 301 VEAGAMAVRRVLKRDLKCVAKASGATILSTLANLE------GEETFEVTMLGQAEEVVQERICDDELILIKNTKARTSASIILRGANDFMCDEMERSLHDALCVVKRVLESKSVVPGGGAVEAALSIYLENYATSMGSREQLAIAEFARSLLVIPNTLA----VNAAQDSTDLVAKLR 468 HSP 2 Score: 31.9574 bits (71), Expect = 1.905e-17 Identity = 18/49 (36.73%), Postives = 24/49 (48.98%), Query Frame = 3 Query: 522 WIGIDGNPGAISDMKQQKIRDPHHANAPPLNTAIEAACMLLKNDDICPL 668 WIG+D G D KQ + +P L A EAA +L+ DD+ L Sbjct: 485 WIGLDLVHGKPRDNKQAGVFEPTIVKVKSLKFATEAAITILRIDDLIKL 533
BLAST of DY259923 vs. ExPASy Swiss-Prot
Match: TCPD_DICDI (T-complex protein 1 subunit delta OS=Dictyostelium discoideum GN=cct4 PE=3 SV=1) HSP 1 Score: 75.485 bits (184), Expect = 1.906e-17 Identity = 52/167 (31.14%), Postives = 80/167 (47.90%), Query Frame = 2 Query: 2 LITVGVSAIRRLRKTDNNRIAKACGAVIVNTPDELQESDVGTGAGLFEVKKIGDEFFAFIVDCKDP-KACTVLLRGASKDLLNDVERNLRDAMSVARNIINNPKLVPGGGATELTVSATLKQKSSSIEGLEKWPYEAAAIAFEAIPRTLAHNCGINVFRTMTALARK 499 L + + I+ + + D I G V D +G A L E D + +P K TVL RG++K +L++ ER+L DA+ V R+++ L+ GGGA E+ VS + S ++ G+ + A A A E IP TLA N G++ +T L K Sbjct: 312 LAKLKILVIKDIERDDIEFICNTIGCQPVANIDSFTADKLGK-ADLVEEVGTSDGKIVKVTGIPNPGKTVTVLCRGSNKLVLDEAERSLHDALCVIRSLVKKKFLIAGGGAPEIEVSQQVTAFSKTLTGITSYCVRAYAEALEIIPYTLAENAGLHPISIVTELRNK 477 HSP 2 Score: 35.039 bits (79), Expect = 1.906e-17 Identity = 23/58 (39.66%), Postives = 32/58 (55.17%), Query Frame = 3 Query: 489 LQGKHANGA-NAWIGIDGNPGAISDMKQQKIRDPHHANAPPLNTAIEAACMLLKNDDI 659 L+ KHA G N+ GI+ GAI+++ Q+ + P + L A E MLLK DDI Sbjct: 474 LRNKHAQGEINS--GINVRKGAITNILQENVVQPLLVSTSALTLATETVVMLLKIDDI 529
BLAST of DY259923 vs. ExPASy Swiss-Prot
Match: TCPA_MONDO (T-complex protein 1 subunit alpha OS=Monodelphis domestica GN=TCP1 PE=2 SV=1) HSP 1 Score: 78.5666 bits (192), Expect = 3.219e-17 Identity = 52/166 (31.33%), Postives = 89/166 (53.61%), Query Frame = 2 Query: 23 AIRRLRKTDNNRIAKACGAVIVNTPDELQESDVGTGAGLFEVK-----KIGDEFFAFIVDCKDPKACTVLLRGASKDLLNDVERNLRDAMSVARNIINNPKLVPGGGATELTVSATLKQKSSSIEGLEKWPYEAAAIAFEAIPRTLAHNCGINVFRTMTALARKTR 505 A+RR+ K D RIAKA GA I++T L+ + + L + + +I D+ I + K + +++LRGA+ + +++ER+L DA+ V + ++ + +VPGGGA E +S L+ ++S+ E+ A + IP TLA +N + T L K R Sbjct: 307 AVRRVLKRDLKRIAKASGATILSTLASLEGEESFEASMLGQAEEVVQERICDDELILIKNTKARTSASIILRGANDFMCDEMERSLHDALCVVKRVLESKSVVPGGGAVEAALSIYLENYATSMGSREQLAIAEFARSLLIIPNTLA----VNAAQDSTDLVAKLR 468 HSP 2 Score: 31.187 bits (69), Expect = 3.219e-17 Identity = 17/49 (34.69%), Postives = 24/49 (48.98%), Query Frame = 3 Query: 522 WIGIDGNPGAISDMKQQKIRDPHHANAPPLNTAIEAACMLLKNDDICPL 668 WIG+D G D +Q + +P L A EAA +L+ DD+ L Sbjct: 485 WIGLDLVNGKPRDNRQTGVFEPTMVKVKSLKFATEAAITILRIDDLIKL 533
BLAST of DY259923 vs. ExPASy Swiss-Prot
Match: TCPA2_MOUSE (T-complex protein 1 subunit alpha B OS=Mus musculus GN=Tcp1 PE=1 SV=3) HSP 1 Score: 77.411 bits (189), Expect = 4.185e-17 Identity = 54/178 (30.34%), Postives = 88/178 (49.44%), Query Frame = 2 Query: 5 ITVGVSAIRRLRKTDNNRIAKACGAVIVNTPDELQESDVGTGAGLFEVKKIG-----------DEFFAFIVDCKDPKACTVLLRGASKDLLNDVERNLRDAMSVARNIINNPKLVPGGGATELTVSATLKQKSSSIEGLEKWPYEAAAIAFEAIPRTLAHNCGINVFRTMTALARKTR 505 + G A+RR+ K D +AKA GA I++T L+ G FEV +G D+ I + K + +++LRGA+ + +++ER+L DA+ V + ++ +VPGGGA E +S L+ ++S+ E+ A + IP TLA +N + T L K R Sbjct: 301 VEAGAMAVRRVLKRDLKHVAKASGASILSTLANLE------GEETFEVTMLGQAEEVVQERICDDELILIKNTKARTSASIILRGANDFMCDEMERSLHDALCVVKRVLELKSVVPGGGAVEAALSIYLENYATSMGSREQLAIAEFARSLLVIPNTLA----VNAAQDSTDLVAKLR 468 HSP 2 Score: 31.9574 bits (71), Expect = 4.185e-17 Identity = 18/49 (36.73%), Postives = 24/49 (48.98%), Query Frame = 3 Query: 522 WIGIDGNPGAISDMKQQKIRDPHHANAPPLNTAIEAACMLLKNDDICPL 668 WIG+D G D KQ + +P L A EAA +L+ DD+ L Sbjct: 485 WIGLDLVHGKPRDNKQAGVFEPTIVKVKSLKFATEAAITILRIDDLIKL 533
BLAST of DY259923 vs. ExPASy Swiss-Prot
Match: TCPE_SCHPO (T-complex protein 1 subunit epsilon OS=Schizosaccharomyces pombe GN=cct5 PE=2 SV=1) HSP 1 Score: 79.337 bits (194), Expect = 4.186e-17 Identity = 49/165 (29.70%), Postives = 90/165 (54.55%), Query Frame = 2 Query: 2 LITVGVSAIRRLRKTDNNRIAKACGAVIVNTPDELQESDVGTGAGLFEVKKIGD--EFFAFIVDCKDPKACTVLLRGASKDLLNDVERNLRDAMSVARNIINNPKLVPGGGATELTVSATLKQKSSSIEGLEKWPYEAAAIAFEAIPRTLAHNCGINVFRTMTAL 490 L+ + A+R + + IA A IV ++L +G+ AG+ G + I C + +A TV +RG++K ++++ +R L DA+ V RN+I + ++V GGGA E++ S + +++ I G++++ A A A + IP LA N G++ +TA+ Sbjct: 316 LLQNNLPAVRWVGGPEIELIAIATNGRIVPRFEDLSSDKLGS-AGIVREVSFGTTRDKILVIEKCANSRAVTVFVRGSNKMIVDEAKRALHDALCVVRNLIRDNRVVYGGGAAEISCSLAVTKEAEKIPGIDQYSMGAFADALDTIPLALAENSGLSSIEALTAV 479 HSP 2 Score: 30.0314 bits (66), Expect = 4.186e-17 Identity = 17/57 (29.82%), Postives = 29/57 (50.88%), Query Frame = 3 Query: 489 LQGKHANGANAWIGIDGNPGAISDMKQQKIRDPHHANAPPLNTAIEAACMLLKNDDI 659 ++ +H A++GID +DM++Q + DP L A + M+LK +DI Sbjct: 479 VKARHVKENKAYLGIDCLQTGSNDMRKQFVIDPLIGKKQQLLLATQLCRMVLKVNDI 535
BLAST of DY259923 vs. ExPASy Swiss-Prot
Match: TCPZ_SCHPO (T-complex protein 1 subunit zeta OS=Schizosaccharomyces pombe GN=cct6 PE=2 SV=1) HSP 1 Score: 88.9669 bits (219), Expect = 4.731e-17 Identity = 49/161 (30.43%), Postives = 86/161 (53.42%), Query Frame = 2 Query: 14 GVSAIRRLRKTDNNRIAKACGAVIVNTPDELQESDVGTGAGLFEVKKIGDEFFAFIVDCKDPKACTVLLRGASKDLLNDVERNLRDAMSVARNIINNPKLVPGGGATELTVSATLKQK--SSSIEGLEKWPYEAAAIAFEAIPRTLAHNCGINVFRTMTAL 490 G+ A+RR ++ + R+ ACG V N+ D+L +G ++E + +G+E + F+ D KDPK+ T+L+ G + + ++ RD + +N + + L+ G GA E+ +A L+ K + ++G K A A A IP+TLA N + + AL Sbjct: 308 GIMALRRAKRRNMERLQLACGGVAQNSVDDLNPEVLGWAGSVYE-RTLGEEKYTFVEDVKDPKSATILIHGPNTYTIQQIQDATRDGLRAVKNAVEDNCLIVGAGAFEVACAAHLRNKFAAKEVKGKAKMGVYAYADALLIIPKTLAANSSYDTQDAIVAL 467
BLAST of DY259923 vs. ExPASy Swiss-Prot
Match: TCPA_SCHMA (T-complex protein 1 subunit alpha OS=Schistosoma mansoni GN=TCP-1A PE=2 SV=1) HSP 1 Score: 73.559 bits (179), Expect = 5.442e-17 Identity = 43/159 (27.04%), Postives = 86/159 (54.09%), Query Frame = 2 Query: 5 ITVGVSAIRRLRKTDNNRIAKACGAVIVNTPDELQESDVGTGAGLFEVKKIGDEFFAF--IVDCKDPK---ACTVLLRGASKDLLNDVERNLRDAMSVARNIINNPKLVPGGGATELTVSATLKQKSSSIEGLEKWPYEAAAIAFEAIPRTLAHNCGIN 466 + V A+RR +K D +AKA G ++ + +++ +V L +++ E ++ + PK + +++LRGA+ ++++ER+L DA+ V + ++ + ++VPG GA E VS L+ + ++ E+ A A +IP+ LA N G++ Sbjct: 298 VEVNAMAVRRCKKVDLKNMAKATGGQLIVSLADMEGDEVFDPTKLGNAEEVSQERICDDELIILRGPKVHPSASIILRGANDFYVDEMERSLHDALLVVKRVLESKRIVPGAGACETAVSIYLENYALTLSSREQLAIAEFARAMLSIPKQLAVNAGVD 456 HSP 2 Score: 35.4242 bits (80), Expect = 5.442e-17 Identity = 20/63 (31.75%), Postives = 30/63 (47.62%), Query Frame = 3 Query: 492 QGKHANGANAWIGIDGNPGAISDMKQQKIRDPHHANAPPLNTAIEAACMLLKNDDICPLTSRK 680 Q K N W G+D N ++D K+ + +P + L A EAA +L+ DD+ L K Sbjct: 472 QSKPDQAHNKWWGLDLNNQYVADCKEIGVFEPLVSKIKSLKFATEAAITILRIDDLIKLKEEK 534
BLAST of DY259923 vs. ExPASy Swiss-Prot
Match: TCPA_SCHPO (T-complex protein 1 subunit alpha OS=Schizosaccharomyces pombe GN=cct1 PE=2 SV=1) HSP 1 Score: 84.3445 bits (207), Expect = 1.195e-16 Identity = 53/173 (30.64%), Postives = 93/173 (53.76%), Query Frame = 2 Query: 2 LITVGVSAIRRLRKTDNNRIAKACGAVIVNTPDELQESDVGTGAGLFEVKKIGDEFFA-----FIVDCKDPKACTVLLRGASKDLLNDVERNLRDAMSVARNIINNPKLVPGGGATELTVSATLKQKSSSIEGLEKWPYEAAAIAFEAIPRTLAHNCGINVFRTMTALARKTR 505 +I G A+RR +K D RIAKA GA ++++ L+ + + L +++ E F+ + K + +++LRG ++ L+++ER++ D++SV + + + K+VPGGGA E +S L+ ++S+ E+ A A IPRTLA +N + T L K R Sbjct: 305 IIEAGAMAVRRCKKEDLRRIAKASGATLLSSLSNLEGEETFESSYLGSAEEVVQEKFSDDECILVKGTKAYSSASIVLRGPNEYSLDEMERSMHDSLSVVKRTLESGKVVPGGGAVETALSIYLENFATSLGSREQLAIAEFAQALLIIPRTLA----VNAAKDSTELTAKLR 473 HSP 2 Score: 23.483 bits (49), Expect = 1.195e-16 Identity = 12/42 (28.57%), Postives = 21/42 (50.00%), Query Frame = 3 Query: 528 GIDGNPGAISDMKQQKIRDPHHANAPPLNTAIEAACMLLKND 653 G+D G I D + + +P + L +A+EA +L+ D Sbjct: 496 GLDLLNGVIRDNVKAGVLEPSMSKLKSLKSAVEACIAILRID 537
BLAST of DY259923 vs. ExPASy Swiss-Prot
Match: TCPD_CANGA (T-complex protein 1 subunit delta OS=Candida glabrata GN=CCT4 PE=3 SV=1) HSP 1 Score: 87.0409 bits (214), Expect = 1.798e-16 Identity = 48/165 (29.09%), Postives = 91/165 (55.15%), Query Frame = 2 Query: 2 LITVGVSAIRRLRKTDNNRIAKACGAVIVNTPDELQESDVGTGAGLFEVKKIGDEFFAF--IVDCKDPKACTVLLRGASKDLLNDVERNLRDAMSVARNIINNPKLVPGGGATELTVSATLKQKSSSIEGLEKWPYEAAAIAFEAIPRTLAHNCGINVFRTMTAL 490 L +G+ I+ + + + ++K+ G ++ + E +G+ + E+ G + F + +V++RGA+ +L++ ER+L DA+ V R ++ L+ GGGA E+ +S L+++S S+EG+E + ++ A A E IP TLA N G+N + +T L Sbjct: 306 LAKLGIMVIKDIEREEIEFLSKSLGCKPISDVELFTEDRLGSADLVEEIDSDGTKIVKFSGVKGVNAKPTVSVIIRGANSMILDETERSLHDALCVIRCLVKERGLIAGGGAPEIEISRRLERESRSMEGVEAYIWQEFAQALEVIPTTLAENAGLNSIKVITEL 470
BLAST of DY259923 vs. ExPASy Swiss-Prot
Match: TCPE_DICDI (T-complex protein 1 subunit epsilon OS=Dictyostelium discoideum GN=cct5 PE=3 SV=1) HSP 1 Score: 79.7221 bits (195), Expect = 2.020e-16 Identity = 47/167 (28.14%), Postives = 92/167 (55.09%), Query Frame = 2 Query: 2 LITVGVSAIRRLRKTDNNRIAKACGAVIVNTPDELQESDVGTGAGLFEVKKIG----DEFFAFIVDCKDPKACTVLLRGASKDLLNDVERNLRDAMSVARNIINNPKLVPGGGATELTVSATLKQKSSSIEGLEKWPYEAAAIAFEAIPRTLAHNCGINVFRTMTAL 490 L+ + A+R + D +IA A G IV +++ +G AGL V+++G + + I DC + A T+ +RG +K ++ + +R++ DA+ V RN+I + +++ GGG++E++ + + I +E++ A A A +AIP LA N G+ +++ + Sbjct: 310 LLQNNLPAVRWVGGLDLEKIAMATGGRIVARFEDVSADKLGR-AGL--VREVGFGTTQDRYLSIEDCPNTNAVTIFVRGGNKMIVEEAKRSIHDALCVTRNLIRDNRVIYGGGSSEISCGLKISAMADDIASIEQYAVRAFADALDAIPLALAENSGLPSIESLSTV 473 HSP 2 Score: 27.335 bits (59), Expect = 2.020e-16 Identity = 17/48 (35.42%), Postives = 22/48 (45.83%), Query Frame = 3 Query: 516 NAWIGIDGNPGAISDMKQQKIRDPHHANAPPLNTAIEAACMLLKNDDI 659 N +GID N +DMK Q + D A + M+LK DDI Sbjct: 482 NPRLGIDCNHRDTNDMKAQHVFDTLPGKTQQFLLANQVVKMILKIDDI 529 The following BLAST results are available for this feature:
BLAST of DY259923 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 141
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Sequences
The
following sequences are available for this feature:
EST sequence >DY259923 ID=DY259923; Name=DY259923; organism=Citrus clementina; type=EST; length=993bpback to top |