DY259924

Overview
NameDY259924
Unique NameDY259924
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length984
Libraries
Library NameType
Fruit-TFcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig1357 contig Ccv1_Contig1357:1..984. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of DY259924 vs. ExPASy Swiss-Prot
Match: CML1_ARATH (Calmodulin-like protein 1 OS=Arabidopsis thaliana GN=CML1 PE=2 SV=1)

HSP 1 Score: 114.39 bits (285), Expect = 1.037e-24
Identity = 59/140 (42.14%), Postives = 92/140 (65.71%), Query Frame = 3
Query:   63 SREEMQKIFNQFDANKDGKISLTELATVLKSMGSSYKEEELVRVMEDLDTDKDGFISLSEFETICRTSSGAAGEAELREAFDLYDQDKNGLISAEELNLVLNRLGIKCSVDGCVAMIKPVDADGDGNVNFEEFRSMMTTS 482
            S  EM+++F++FD +KDGKIS TE   VL+++G     E++ ++ + +D D DGFI   EF    + S G    +++R +F  +D + +G ISAEE+  VL +LG +CS++ C  M++ VDADGDG VN EEF  MM+++
Sbjct:   47 SVNEMRRVFSRFDLDKDGKISQTEYKVVLRALGQERAIEDVPKIFKAVDLDGDGFIDFREFIDAYKRSGGIRS-SDIRNSFWTFDLNGDGKISAEEVMSVLWKLGERCSLEDCNRMVRAVDADGDGLVNMEEFIKMMSSN 185          
BLAST of DY259924 vs. ExPASy Swiss-Prot
Match: POLC2_JUNOX (Polcalcin Jun o 2 OS=Juniperus oxycedrus PE=1 SV=2)

HSP 1 Score: 114.005 bits (284), Expect = 1.354e-24
Identity = 59/141 (41.84%), Postives = 93/141 (65.96%), Query Frame = 3
Query:   63 SREEMQKIFNQFDANKDGKISLTELATVLKSMGSSYKEEELVRVMEDLDTDKDGFISLSEFETICRTSSGAAGEAELREAFDLYDQDKNGLISAEELNLVLNRLGIKCSVDGCVAMIKPVDADGDGNVNFEEFRSMMTTSL 485
            S  E++++F +FDAN DGKIS +ELA +L+S+GS   E E+  +ME+ D D DG++SL EF  +   ++  A   +L+ AF ++D+D NG ISA EL   L  +G  C+++    +I  VD +GDG ++ EEF++MMT+ +
Sbjct:   23 SVHELEEVFKKFDANGDGKISGSELADILRSLGSDVGEAEVKAMMEEADADGDGYVSLQEFVDL---NNKGASVKDLKNAFKVFDRDCNGSISAAELCHTLESVGEPCTIEESKNIIHNVDKNGDGLISVEEFQTMMTSEM 160          
BLAST of DY259924 vs. ExPASy Swiss-Prot
Match: CML32_ARATH (Probable calcium-binding protein CML32 OS=Arabidopsis thaliana GN=CML32 PE=2 SV=1)

HSP 1 Score: 113.235 bits (282), Expect = 2.310e-24
Identity = 59/139 (42.45%), Postives = 88/139 (63.31%), Query Frame = 3
Query:   81 KIFNQFDANKDGKISLTELATVLKSMGSSYKEEELVRVMEDLDTDKDGFISLSEFETICRTSSGAAGEAE---LREAFDLYDQDKNGLISAEELNLVLNRLGIKCSVDGCVAMIKPVDADGDGNVNFEEFRSMMTTSLK 488
            +IF + D NKDGKIS  E A  +++   S   EE+  +  ++D D D  I ++E+ +          E E   ++EAFDLYD D +G ISA E+++VL RLG K ++  C+AM++ VDADGDG V+FEEF++MM+ + K
Sbjct:    5 EIFERVDKNKDGKISWDEFAEAIRAFSPSITSEEIDNMFREIDVDGDNQIDVAEYASCLMLGGEGNKEDEDIVMKEAFDLYDIDGDGKISASEIHVVLKRLGEKQTIAECIAMVRAVDADGDGFVSFEEFKTMMSCNNK 143          
BLAST of DY259924 vs. ExPASy Swiss-Prot
Match: CML7_ARATH (Calmodulin-like protein 7 OS=Arabidopsis thaliana GN=CML7 PE=2 SV=1)

HSP 1 Score: 110.923 bits (276), Expect = 1.146e-23
Identity = 56/138 (40.58%), Postives = 90/138 (65.22%), Query Frame = 3
Query:   72 EMQKIFNQFDANKDGKISLTELATVLKSMGSSYKEEELVRVMEDLDTDKDGFISLSEFETICRTSSGAAGEAE--LREAFDLYDQDKNGLISAEELNLVLNRLGIK--CSVDGCVAMIKPVDADGDGNVNFEEFRSMM 473
            E++++F  FD N DG I+  EL+  L+S+G    ++EL +++E +D + DG + + EF  + +T      E E  ++EAF+++DQ+ +G I+ +EL  VL+ LG+K   ++D C  MIK VD DGDG VN++EFR MM
Sbjct:    5 ELKRVFQMFDKNGDGTITGKELSETLRSLGIYIPDKELTQMIEKIDVNGDGCVDIDEFGELYKTIMDEEDEEEEDMKEAFNVFDQNGDGFITVDELKAVLSSLGLKQGKTLDDCKKMIKKVDVDGDGRVNYKEFRQMM 142          
BLAST of DY259924 vs. ExPASy Swiss-Prot
Match: CML3_ARATH (Calmodulin-like protein 3 OS=Arabidopsis thaliana GN=CML3 PE=2 SV=1)

HSP 1 Score: 109.768 bits (273), Expect = 2.554e-23
Identity = 57/141 (40.43%), Postives = 92/141 (65.25%), Query Frame = 3
Query:   60 VSREEMQKIFNQFDANKDGKISLTELATVLKSMGSSYKEEELVRVMEDLDTDKDGFISLSEFETICRTSSGAAGEAE-LREAFDLYDQDKNGLISAEELNLVLNRLGIK--CSVDGCVAMIKPVDADGDGNVNFEEFRSMM 473
            + + E+ +IF  FD N DGKI+  EL   L+++G    +++LV+++E +D + DG++ + EF  + +T      E E +REAF+++DQ+++G I+ EEL  VL  LG+K   +++ C  MI  VD DGDG VNF+EF+ MM
Sbjct:    1 MDQAELARIFQMFDRNGDGKITKQELNDSLENLGIYIPDKDLVQMIEKIDLNGDGYVDIEEFGGLYQTIMEERDEEEDMREAFNVFDQNRDGFITVEELRSVLASLGLKQGRTLEDCKRMISKVDVDGDGMVNFKEFKQMM 141          
BLAST of DY259924 vs. ExPASy Swiss-Prot
Match: CML31_ARATH (Probable calcium-binding protein CML31 OS=Arabidopsis thaliana GN=CML31 PE=2 SV=2)

HSP 1 Score: 108.612 bits (270), Expect = 5.689e-23
Identity = 59/140 (42.14%), Postives = 82/140 (58.57%), Query Frame = 3
Query:   75 MQKIFNQFDANKDGKISLTELATVLKSMGSSYKEEELVRVMEDLDTDKDGFISLSEFETICRTSSGAAGEAE----LREAFDLYDQDKNGLISAEELNLVLNRLGIKCSVDGCVAMIKPVDADGDGNVNFEEFRSMMTTS 482
            M +IF   D NKDGKI   E A  ++        EE+ ++   LD D DG I   EF +    + G   + E    ++EAFDLYD D +G ISA E+++VL RLG K +++ CV M++ VD D DG VNFEEF+ MM ++
Sbjct:    1 MAEIFESVDKNKDGKILWDEFAEAIRVFSPQITSEEIDKMFIVLDVDGDGQIDDVEFASCLMVNGGGEKDTEEEVVMKEAFDLYDMDGDGKISASEIHVVLKRLGEKHTMEDCVVMVQTVDKDSDGFVNFEEFKIMMNSN 140          
BLAST of DY259924 vs. ExPASy Swiss-Prot
Match: CALM_PYUSP (Calmodulin OS=Pyuridae sp. PE=1 SV=2)

HSP 1 Score: 108.612 bits (270), Expect = 5.689e-23
Identity = 59/137 (43.07%), Postives = 84/137 (61.31%), Query Frame = 3
Query:   72 EMQKIFNQFDANKDGKISLTELATVLKSMGSSYKEEELVRVMEDLDTDKDGFISLSEFETI-CRTSSGAAGEAELREAFDLYDQDKNGLISAEELNLVLNRLGIKCSVDGCVAMIKPVDADGDGNVNFEEFRSMMTT 479
            E ++ F+ FD + DG I+  EL TV++S+G +  E EL  ++ ++D D DG I   EF T+  R       E E+REAF ++D+D NG ISA EL  V+  LG K + +    MI+  D DGDG VN+EEF +MMT+
Sbjct:   12 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGDGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVTMMTS 148          
BLAST of DY259924 vs. ExPASy Swiss-Prot
Match: CALM_SUBDO (Calmodulin OS=Suberites domuncula PE=2 SV=3)

HSP 1 Score: 108.227 bits (269), Expect = 7.430e-23
Identity = 59/137 (43.07%), Postives = 84/137 (61.31%), Query Frame = 3
Query:   72 EMQKIFNQFDANKDGKISLTELATVLKSMGSSYKEEELVRVMEDLDTDKDGFISLSEFETI-CRTSSGAAGEAELREAFDLYDQDKNGLISAEELNLVLNRLGIKCSVDGCVAMIKPVDADGDGNVNFEEFRSMMTT 479
            E ++ F+ FD + DG I+  EL TV++S+G +  E EL  ++ ++DTD +G I   EF T+  R       E E+REAF ++D+D NG ISA EL  V+  LG K + +    MI+  D DGDG VN+EEF  MMT+
Sbjct:   12 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDTDGNGTIDFPEFLTMMARKMKETDSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADTDGDGQVNYEEFVGMMTS 148          
BLAST of DY259924 vs. ExPASy Swiss-Prot
Match: CALM_CAEEL (Calmodulin OS=Caenorhabditis elegans GN=cmd-1 PE=1 SV=3)

HSP 1 Score: 108.227 bits (269), Expect = 7.430e-23
Identity = 59/137 (43.07%), Postives = 84/137 (61.31%), Query Frame = 3
Query:   72 EMQKIFNQFDANKDGKISLTELATVLKSMGSSYKEEELVRVMEDLDTDKDGFISLSEFETI-CRTSSGAAGEAELREAFDLYDQDKNGLISAEELNLVLNRLGIKCSVDGCVAMIKPVDADGDGNVNFEEFRSMMTT 479
            E ++ F+ FD + DG I+  EL TV++S+G +  E EL  ++ ++D D +G I   EF T+  R       E E+REAF ++D+D NG ISA EL  V+  LG K + +    MI+  D DGDG VN+EEF +MMTT
Sbjct:   12 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVTMMTT 148          
BLAST of DY259924 vs. ExPASy Swiss-Prot
Match: CML5_ARATH (Calmodulin-like protein 5 OS=Arabidopsis thaliana GN=CML5 PE=2 SV=2)

HSP 1 Score: 107.842 bits (268), Expect = 9.704e-23
Identity = 53/146 (36.30%), Postives = 92/146 (63.01%), Query Frame = 3
Query:   60 VSREEMQKIFNQFDANKDGKISLTELATVLKSMGSSYKEEELVRVMEDLDTDKDGFISLSEFETICRT------SSGAAGEAELREAFDLYDQDKNGLISAEELNLVLNRLGIK--CSVDGCVAMIKPVDADGDGNVNFEEFRSMM 473
            +   E++++F  FD N DG+I+  EL   L+++G    +++L +++  +D + DG + + EFE++  +      + G   E ++++AF+++DQD +G I+ EEL  V+  LG+K   ++DGC  MI  VDADGDG VN++EF  MM
Sbjct:   61 IDPSELKRVFQMFDKNGDGRITKEELNDSLENLGIYIPDKDLTQMIHKIDANGDGCVDIDEFESLYSSIVDEHHNDGETEEEDMKDAFNVFDQDGDGFITVEELKSVMASLGLKQGKTLDGCKKMIMQVDADGDGRVNYKEFLQMM 206          
The following BLAST results are available for this feature:
BLAST of DY259924 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 315
Match NameE-valueIdentityDescription
CML1_ARATH1.037e-2442.14Calmodulin-like protein 1 OS=Arabidopsis thaliana ... [more]
POLC2_JUNOX1.354e-2441.84Polcalcin Jun o 2 OS=Juniperus oxycedrus PE=1 SV=2[more]
CML32_ARATH2.310e-2442.45Probable calcium-binding protein CML32 OS=Arabidop... [more]
CML7_ARATH1.146e-2340.58Calmodulin-like protein 7 OS=Arabidopsis thaliana ... [more]
CML3_ARATH2.554e-2340.43Calmodulin-like protein 3 OS=Arabidopsis thaliana ... [more]
CML31_ARATH5.689e-2342.14Probable calcium-binding protein CML31 OS=Arabidop... [more]
CALM_PYUSP5.689e-2343.07Calmodulin OS=Pyuridae sp. PE=1 SV=2[more]
CALM_SUBDO7.430e-2343.07Calmodulin OS=Suberites domuncula PE=2 SV=3[more]
CALM_CAEEL7.430e-2343.07Calmodulin OS=Caenorhabditis elegans GN=cmd-1 PE=1... [more]
CML5_ARATH9.704e-2336.30Calmodulin-like protein 5 OS=Arabidopsis thaliana ... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAP10YK13FM1 Fruit-TF Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY259924 ID=DY259924; Name=DY259924; organism=Citrus clementina; type=EST; length=984bp
GAAAAAGAAACCTTATGGCGGCAACAACGGAGGCAGATTCGAATAGGAAA
CAGCTAATAGTGAGCCGGGAGGAGATGCAGAAGATCTTCAACCAGTTCGA
CGCGAACAAGGACGGCAAGATCTCGCTGACGGAGCTGGCGACCGTTTTGA
AATCAATGGGATCGAGCTACAAAGAGGAGGAGCTCGTCCGCGTCATGGAG
GATCTCGATACCGACAAGGACGGATTCATCAGCCTGTCGGAGTTCGAAAC
GATCTGCCGGACCTCCTCTGGTGCCGCCGGCGAGGCCGAGCTCCGCGAGG
CGTTTGATCTCTACGATCAGGACAAGAACGGCTTGATTTCGGCGGAGGAG
TTGAATTTGGTGTTGAACAGGCTCGGAATTAAGTGCTCGGTTGATGGATG
TGTGGCGATGATTAAGCCGGTGGATGCCGATGGTGATGGCAATGTGAATT
TTGAAGAGTTTCGTTCGATGATGACTACTTCTCTTAAACCTGGTCCTGCG
CCGTAGATTTTGGTTTCGACGGTGATTCGATGGTCGGACGTACCGATATT
AACTTGCGTCCAGTTATAGGCTGGCGATTTTCTTCGTGTCTAATTGTGTA
AACAACATTTAGAGTTAAAAAATCTAGAGTGCATTTAGAACGGCATAAAA
GTGAGTGCACGCAAGACACATCGGACTCGCTCGTCTCAATGTAAGCCCTA
AGTTTCTATCACTAGACAAACAAACCTGCACGCCCTAATCACCACTATCA
AAATAGGAATACTGAAACACCGTAGTGATATTGCCATTACCTCACTTTAC
GTTGTAATAGCCCTTTCCACCATCTTAATCGATCCTATCCTGTTACCTCC
GACTGCCTGCTCCAGTTTTTTAGATACTGTTTTTTATTATCGGCACCCGA
TGGCCACCCCGGGCAGCAGTCCGCCAGTCTCTTGAAGTCAATTATCTGCA
TCTCCCCTTACGACTCGTATTATACTCACCACCC
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