DY259925

Overview
NameDY259925
Unique NameDY259925
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length1070
Libraries
Library NameType
Fruit-TFcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig1358 contig Ccv1_Contig1358:1..1070. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of DY259925 vs. ExPASy Swiss-Prot
Match: CDC2_ORYJA (Cell division control protein 2 homolog OS=Oryzias javanicus GN=cdc2 PE=2 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 7.362e-11
Identity = 40/122 (32.79%), Postives = 62/122 (50.82%), Query Frame = 2
Query:    2 YTAAPYVWSVGCIFMELMNRRPLFPGNDHLHQMRLLIELLGTPTDADLGFVRNEDAKRYIRQLPQHPRQSLAQVFPHVHPLAIDLVDRMLTFDPMKRITVDEALAHPYLARLHDEADEPVCP 367
            Y+    VWS G IF EL  ++PLF G+  + Q+  +   LGTP +     V  E    Y    P+    SL+ +  ++    +DL+ +ML ++P KRI+  EA+ HPY     D+ D+   P
Sbjct:  181 YSTPVDVWSTGTIFAELATKKPLFHGDSEIDQLFRIFRTLGTPNNDVWPDV--ESLPDYKNTFPKWMEGSLSSMVKNLDKNGLDLLAKMLIYNPPKRISAREAMTHPYF----DDLDKSTLP 296          
BLAST of DY259925 vs. ExPASy Swiss-Prot
Match: CDC2_HUMAN (Cell division control protein 2 homolog OS=Homo sapiens GN=CDC2 PE=1 SV=2)

HSP 1 Score: 68.5514 bits (166), Expect = 7.362e-11
Identity = 39/115 (33.91%), Postives = 60/115 (52.17%), Query Frame = 2
Query:    2 YTAAPYVWSVGCIFMELMNRRPLFPGNDHLHQMRLLIELLGTPTDADLGFVRNEDAKRYIRQLPQHPRQSLAQVFPHVHPLAIDLVDRMLTFDPMKRITVDEALAHPYLARLHDE 346
            Y+    +WS+G IF EL  ++PLF G+  + Q+  +   LGTP +     V  E  + Y    P+    SLA    ++    +DL+ +ML +DP KRI+   AL HPY   L ++
Sbjct:  181 YSTPVDIWSIGTIFAELATKKPLFHGDSEIDQLFRIFRALGTPNNEVWPEV--ESLQDYKNTFPKWKPGSLASHVKNLDENGLDLLSKMLIYDPAKRISGKMALNHPYFNDLDNQ 293          
BLAST of DY259925 vs. ExPASy Swiss-Prot
Match: CDC2_EMENI (Cell division control protein 2 OS=Emericella nidulans GN=nimX PE=2 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 7.362e-11
Identity = 35/109 (32.11%), Postives = 58/109 (53.21%), Query Frame = 2
Query:    2 YTAAPYVWSVGCIFMELMNRRPLFPGNDHLHQMRLLIELLGTPTDADL-GFVRNEDAKRYIRQLPQHPRQSLAQVFPHVHPLAIDLVDRMLTFDPMKRITVDEALAHPY 325
            Y+    +WS G IF E+  R+PLFPG+  + ++  +  +LGTP +    G     D K      P+  R+ +  V P +    +DL++ +L +DP +RI+  +A  HPY
Sbjct:  200 YSTGVDMWSCGAIFAEMCTRKPLFPGDSEIDEIFKIFRILGTPDETIWPGVTSFPDFK---PTFPKWKREDIQNVVPGLEEDGLDLLEALLEYDPARRISAKQACMHPY 305          
BLAST of DY259925 vs. ExPASy Swiss-Prot
Match: CDC2_DROME (Cell division control protein 2 homolog OS=Drosophila melanogaster GN=cdc2 PE=1 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 7.362e-11
Identity = 37/109 (33.94%), Postives = 55/109 (50.46%), Query Frame = 2
Query:    2 YTAAPYVWSVGCIFMELMNRRPLFPGNDHLHQMRLLIELLGTPT-DADLGFVRNEDAKRYIRQLPQHPRQSLAQVFPHVHPLAIDLVDRMLTFDPMKRITVDEALAHPY 325
            Y+    +WS+GCIF E+  R+PLF G+  + Q+  +  +L TPT D   G     D   Y    P      L     ++    IDL+ +ML +DP+ RI+  + L HPY
Sbjct:  181 YSCPVDIWSIGCIFAEMATRKPLFQGDSEIDQLFRMFRILKTPTEDIWPGVTSLPD---YKNTFPCWSTNQLTNQLKNLDANGIDLIQKMLIYDPVHRISAKDILEHPY 286          
BLAST of DY259925 vs. ExPASy Swiss-Prot
Match: PHO85_ASHGO (Negative regulator of the PHO system OS=Ashbya gossypii GN=PHO85 PE=3 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 9.615e-11
Identity = 33/118 (27.97%), Postives = 62/118 (52.54%), Query Frame = 2
Query:    2 YTAAPYVWSVGCIFMELMNRRPLFPGNDHLHQMRLLIELLGTPTDADLGFVRNEDAKRYIRQLPQHPRQSLAQVF-----PHVHPLAIDLVDRMLTFDPMKRITVDEALAHPYLARLH 340
            Y  +  +WS GCI  E++  + LFPG +   Q++L+ E +GTPT+    +V      +Y  Q+P +P + + Q+        +  + ++L+  +L  +P  R++  +AL+HP     H
Sbjct:  188 YCTSIDIWSCGCILAEMIMGKALFPGTNDDEQLKLIFETMGTPTEQT--WVGVSQLPKYNPQIPLYPNKDIKQLLQATTKEQISDVLVNLIQGLLQLNPSMRLSAQQALSHPLFEEYH 303          
BLAST of DY259925 vs. ExPASy Swiss-Prot
Match: CDK10_MOUSE (Cell division protein kinase 10 OS=Mus musculus GN=Cdk10 PE=2 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 9.615e-11
Identity = 36/103 (34.95%), Postives = 58/103 (56.31%), Query Frame = 2
Query:   20 VWSVGCIFMELMNRRPLFPGNDHLHQMRLLIELLGTPTDADL-GFVRNEDAKRYIRQLPQHPRQSLAQVFPHVHPLAIDLVDRMLTFDPMKRITVDEALAHPY 325
            +W+VGCI  EL+  +PL PG   +HQ+ L+++LLGTP++    GF +   A +Y   L + P  +L   FP +    + L++ +  +DP KR T  + L   Y
Sbjct:  222 MWAVGCILAELLAHKPLLPGTSEIHQIDLIVQLLGTPSENIWPGFSKLPLAGQY--SLRKQPYNNLKHKFPWLSEAGLRLLNFLFMYDPKKRATSGDCLESSY 322          
BLAST of DY259925 vs. ExPASy Swiss-Prot
Match: CDC2_ORYLU (Cell division control protein 2 homolog OS=Oryzias luzonensis GN=cdc2 PE=2 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 9.615e-11
Identity = 40/122 (32.79%), Postives = 62/122 (50.82%), Query Frame = 2
Query:    2 YTAAPYVWSVGCIFMELMNRRPLFPGNDHLHQMRLLIELLGTPTDADLGFVRNEDAKRYIRQLPQHPRQSLAQVFPHVHPLAIDLVDRMLTFDPMKRITVDEALAHPYLARLHDEADEPVCP 367
            Y+    VWS G IF EL  ++PLF G+  + Q+  +   LGTP +     V  E    Y    P+    SL+ +  ++    +DL+ +ML ++P KRI+  EA+ HPY     D+ D+   P
Sbjct:  181 YSTPVDVWSTGTIFAELATKKPLFHGDSEIDQLFRIFRTLGTPNNDVWPDV--ESLPDYKNTFPKWKGGSLSSMVKNLDKNGLDLLAKMLIYNPPKRISAREAMTHPYF----DDLDKSTLP 296          
The following BLAST results are available for this feature:
BLAST of DY259925 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 317
Match NameE-valueIdentityDescription
CDC2_ORYJA7.362e-1132.79Cell division control protein 2 homolog OS=Oryzias... [more]
CDC2_HUMAN7.362e-1133.91Cell division control protein 2 homolog OS=Homo sa... [more]
CDC2_EMENI7.362e-1132.11Cell division control protein 2 OS=Emericella nidu... [more]
CDC2_DROME7.362e-1133.94Cell division control protein 2 homolog OS=Drosoph... [more]
PHO85_ASHGO9.615e-1127.97Negative regulator of the PHO system OS=Ashbya gos... [more]
CDK10_MOUSE9.615e-1134.95Cell division protein kinase 10 OS=Mus musculus GN... [more]
CDC2_ORYLU9.615e-1132.79Cell division control protein 2 homolog OS=Oryzias... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAP10YK14FM1 Fruit-TF Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY259925 ID=DY259925; Name=DY259925; organism=Citrus clementina; type=EST; length=1070bp
CTACACTGCTGCCCCTTATGTGTGGTCTGTTGGCTGTATATTTATGGAGC
TTATGAACAGAAGGCCTCTGTTCCCAGGAAACGATCACTTGCATCAGATG
CGCTTATTGATAGAGCTTCTTGGAACACCAACAGATGCTGATCTGGGGTT
TGTCCGTAATGAGGATGCAAAAAGATATATACGACAACTTCCCCAACATC
CTCGTCAGTCGTTAGCCCAAGTTTTTCCACATGTTCATCCACTGGCTATT
GATCTTGTAGACAGAATGCTTACATTTGATCCCATGAAGAGAATTACTGT
TGACGAAGCACTAGCCCATCCTTATCTTGCAAGATTACATGATGAAGCCG
ATGAACCGGTCTGCCCAGAGCCATTTTCTTTTGATTTTGAGCAACAAAGC
CTGGGAGAAGAGCAAATAAAGGACATGATTTATCAGGAGGCATTACCACT
CAATCCAGGATTTGCTTAATAAAATAAACAGCACTGGTGCTCCGTTTTAA
TATTCACTATTTGTTTGTAATTCCATTAATTCAAGTGTTGCTCGGATGAA
AAGATGACTTTGAAGCCTTGAACCACTGCAGTTTGGCCGACAAATGTTAT
TTTTTCCCCTGCTGTACTATCACTCCTGCTGAAAATAATTAAATTCTCGA
ATTCTAATTTTTTTTGTTCCCCCTACCCTATTTCCACACAAAAAAACAAA
AATAATAACCCCACCTCTCCTTGCACCACTTTCGGCCTACACAGAAACCC
TTTGTTAATTATTTTTGTTTGCACCAATACAGTGACATACTTCCCCCAAC
TCCTCATCTTTCACTTGGCCACCTTCCTATATCCCCCCCTTCATGTATTG
ATAATTAATCTGTCTCCTCTGCTTTCGCCGTGCGCCCTACATCTCCCGCT
TTCCCCACACTCTCCCGACCACTACACACCTCTCATTCTACCTCACTCTC
TCTTTTCTCTCCATACCGATAATCCATTCCATCACCTATTCCAACTTCTC
CACCAACTCTCTTCCTCATCCGGCCATCTCACTTACTCGCCTTGACCTAT
GTTATATTTCCTATATCCTT
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