DY259925

Overview
NameDY259925
Unique NameDY259925
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length1070
Libraries
Library NameType
Fruit-TFcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig1358 contig Ccv1_Contig1358:1..1070. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of DY259925 vs. ExPASy Swiss-Prot
Match: HOG1_COCHE (Mitogen-activated protein kinase HOG1 OS=Cochliobolus heterostrophus GN=HOG1 PE=1 SV=1)

HSP 1 Score: 142.51 bits (358), Expect = 4.012e-33
Identity = 65/142 (45.77%), Postives = 91/142 (64.08%), Query Frame = 2
Query:   20 VWSVGCIFMELMNRRPLFPGNDHLHQMRLLIELLGTPTDADLGFVRNEDAKRYIRQLPQHPRQSLAQVFPHVHPLAIDLVDRMLTFDPMKRITVDEALAHPYLARLHDEADEPVCPEPFSFDFEQQSLGEEQIKDMIYQEAL 445
            +WS GCIF E++  +PLFPG DH++Q  ++ ELLGTP D  +  + +E+  R+++ LP+  RQ LA  F +  P A+DL++ ML FDP KR+  ++ALAHPYLA  HD  DEPV  E F + F    L  +  K M+Y E L
Sbjct:  197 IWSAGCIFAEMLEGKPLFPGKDHVNQFSIITELLGTPPDDVIQTICSENTLRFVQSLPKRERQPLANKFKNAEPDAVDLLENMLVFDPRKRVRAEQALAHPYLAPYHDPTDEPVADEKFDWSFNDADLPVDTWKIMMYSEIL 338          
BLAST of DY259925 vs. ExPASy Swiss-Prot
Match: HOG1_SETTU (Mitogen-activated protein kinase HOG1 OS=Setosphaeria turcica GN=HOG1 PE=2 SV=2)

HSP 1 Score: 142.124 bits (357), Expect = 5.240e-33
Identity = 64/142 (45.07%), Postives = 91/142 (64.08%), Query Frame = 2
Query:   20 VWSVGCIFMELMNRRPLFPGNDHLHQMRLLIELLGTPTDADLGFVRNEDAKRYIRQLPQHPRQSLAQVFPHVHPLAIDLVDRMLTFDPMKRITVDEALAHPYLARLHDEADEPVCPEPFSFDFEQQSLGEEQIKDMIYQEAL 445
            +WS GCIF E++  +PLFPG DH++Q  ++ ELLGTP D  +  + +E+  R+++ LP+  RQ LA  F +  P A+DL++ ML FDP KR+  ++ALAHPYLA  HD  DEP+  E F + F    L  +  K M+Y E L
Sbjct:  170 IWSAGCIFAEMLEGKPLFPGKDHVNQFSIITELLGTPPDDVIQTICSENTLRFVQPLPKRERQPLANKFKNAEPEAVDLLENMLVFDPRKRVRAEQALAHPYLAPYHDPTDEPIAEEKFDWSFNDADLPVDTWKIMMYSEIL 311          
BLAST of DY259925 vs. ExPASy Swiss-Prot
Match: HOG1_TRIAT (Mitogen-activated protein kinase hog1 OS=Trichoderma atroviride GN=hog1 PE=3 SV=1)

HSP 1 Score: 141.739 bits (356), Expect = 6.843e-33
Identity = 67/142 (47.18%), Postives = 89/142 (62.68%), Query Frame = 2
Query:   20 VWSVGCIFMELMNRRPLFPGNDHLHQMRLLIELLGTPTDADLGFVRNEDAKRYIRQLPQHPRQSLAQVFPHVHPLAIDLVDRMLTFDPMKRITVDEALAHPYLARLHDEADEPVCPEPFSFDFEQQSLGEEQIKDMIYQEAL 445
            +WS GCIF E++  +PLFPG DH++Q  ++ ELLGTP D  +  + +E+  R+++ LP+  RQ L   F +    AIDL++RML FDP KRIT  EALAH YLA  HD  DEPV  E F + F    L  +  K M+Y E L
Sbjct:  197 IWSAGCIFAEMLEGKPLFPGKDHVNQFSIITELLGTPPDDVINTIASENTLRFVKSLPKRERQPLRNKFKNADDSAIDLLERMLVFDPKKRITATEALAHDYLAPYHDPTDEPVAEEKFDWSFNDADLPVDTWKIMMYSEIL 338          
BLAST of DY259925 vs. ExPASy Swiss-Prot
Match: HOG1_ALTBR (Mitogen-activated protein kinase HOG1 OS=Alternaria brassicicola GN=HOG1 PE=3 SV=1)

HSP 1 Score: 141.739 bits (356), Expect = 6.843e-33
Identity = 63/142 (44.37%), Postives = 91/142 (64.08%), Query Frame = 2
Query:   20 VWSVGCIFMELMNRRPLFPGNDHLHQMRLLIELLGTPTDADLGFVRNEDAKRYIRQLPQHPRQSLAQVFPHVHPLAIDLVDRMLTFDPMKRITVDEALAHPYLARLHDEADEPVCPEPFSFDFEQQSLGEEQIKDMIYQEAL 445
            +WS GCIF E++  +PLFPG DH++Q  ++ ELLGTP D  +  + +E+  R+++ LP+  RQ L+  F +  P A+DL++ ML FDP KR+  ++ALAHPYLA  HD  DEP+  E F + F    L  +  K M+Y E L
Sbjct:  197 IWSAGCIFAEMLEGKPLFPGKDHVNQFSIITELLGTPPDDVIQTICSENTLRFVQSLPKRERQPLSNKFKNAEPQAVDLLENMLVFDPKKRVRAEQALAHPYLAPYHDPTDEPIAEEKFDWSFNDADLPVDTWKIMMYSEIL 338          
BLAST of DY259925 vs. ExPASy Swiss-Prot
Match: ERKA_DROME (Mitogen-activated protein kinase ERK-A OS=Drosophila melanogaster GN=rl PE=1 SV=2)

HSP 1 Score: 141.739 bits (356), Expect = 6.843e-33
Identity = 64/148 (43.24%), Postives = 97/148 (65.54%), Query Frame = 2
Query:    2 YTAAPYVWSVGCIFMELMNRRPLFPGNDHLHQMRLLIELLGTPTDADLGFVRNEDAKRYIRQLPQHPRQSLAQVFPHVHPLAIDLVDRMLTFDPMKRITVDEALAHPYLARLHDEADEPVCPEPFSFDFEQQSLGEEQIKDMIYQEAL 445
            YT +  +WSVGCI  E+++ RP+FPG  +L Q+  ++ +LG+P+  DL  + NE A+ Y+  LP  P    A++FP+   LA+DL+ +MLTF+P KRI V+EALAHPYL + +D  DEPV   PF  + E   +  + +K +I++E L
Sbjct:  268 YTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGVLGSPSRDDLECIINEKARNYLESLPFKPNVPWAKLFPNADALALDLLGKMLTFNPHKRIPVEEALAHPYLEQYYDPGDEPVAEVPFRINMENDDISRDALKSLIFEETL 415          
BLAST of DY259925 vs. ExPASy Swiss-Prot
Match: MPK2_ARATH (Mitogen-activated protein kinase 2 OS=Arabidopsis thaliana GN=MPK2 PE=1 SV=2)

HSP 1 Score: 141.354 bits (355), Expect = 8.937e-33
Identity = 67/147 (45.58%), Postives = 99/147 (67.35%), Query Frame = 2
Query:   20 VWSVGCIFMELMNRRPLFPGNDHLHQMRLLIELLGTPTDADLGFVRNEDAKRYIRQLPQHPRQSLAQVFPHVHPLAIDLVDRMLTFDPMKRITVDEALAHPYLARLHDEADEPVCPEPFSFDF-EQQSLGEEQIKDMIYQEALPLNP 457
            VWSVGCIF EL+ R+P+FPG + L+Q++L+I +LG+  + DL F+ N  AKRYI  LP  P  S ++++P  + LAIDL+ +ML  DP KRI+V EAL HPY+A L+D +  P    P   D  E + LG E I++++++E +  +P
Sbjct:  217 VWSVGCIFAELLGRKPVFPGTECLNQIKLIINILGSQREEDLEFIDNPKAKRYIESLPYSPGISFSRLYPGANVLAIDLLQKMLVLDPSKRISVTEALQHPYMAPLYDPSANPPAQVPIDLDVDEDEDLGAEMIRELMWKEMIHYHP 363          
BLAST of DY259925 vs. ExPASy Swiss-Prot
Match: HOG1_ARXAD (Mitogen-activated protein kinase hog1 OS=Arxula adeninivorans GN=hog1 PE=1 SV=1)

HSP 1 Score: 141.354 bits (355), Expect = 8.937e-33
Identity = 64/142 (45.07%), Postives = 91/142 (64.08%), Query Frame = 2
Query:   20 VWSVGCIFMELMNRRPLFPGNDHLHQMRLLIELLGTPTDADLGFVRNEDAKRYIRQLPQHPRQSLAQVFPHVHPLAIDLVDRMLTFDPMKRITVDEALAHPYLARLHDEADEPVCPEPFSFDFEQQSLGEEQIKDMIYQEAL 445
            +WS GCIF E++  +PLFPG DH+HQ  ++ ELLG P D  +  + +E+   +++ LP+  R  L+Q FP+  P A+DL+++ML FDP KRI   +ALAHPYLA  H+ +DEPV  E F + F    L  +  K M+Y E L
Sbjct:  197 IWSAGCIFAEMLRGKPLFPGKDHVHQFSIITELLGNPPDDVIETIGSENTLNFVKSLPKRERIPLSQKFPNADPDAVDLLEKMLVFDPRKRINAADALAHPYLAPYHEPSDEPVASEKFDWSFNDADLPVDTWKVMMYSEIL 338          
BLAST of DY259925 vs. ExPASy Swiss-Prot
Match: HOG1_GIBZE (Mitogen-activated protein kinase HOG1 OS=Gibberella zeae GN=HOG1 PE=3 SV=1)

HSP 1 Score: 140.584 bits (353), Expect = 1.524e-32
Identity = 66/142 (46.48%), Postives = 89/142 (62.68%), Query Frame = 2
Query:   20 VWSVGCIFMELMNRRPLFPGNDHLHQMRLLIELLGTPTDADLGFVRNEDAKRYIRQLPQHPRQSLAQVFPHVHPLAIDLVDRMLTFDPMKRITVDEALAHPYLARLHDEADEPVCPEPFSFDFEQQSLGEEQIKDMIYQEAL 445
            +WS GCIF E++  +PLFPG DH++Q  ++ ELLGTP D  +  + +E+  R+++ LP+  RQ L   F +    AIDL++RML FDP KRIT  EALAH YL+  HD  DEPV  E F + F    L  +  K M+Y E L
Sbjct:  197 IWSAGCIFAEMLEGKPLFPGKDHVNQFSIITELLGTPPDDVINTIASENTLRFVKSLPKRERQPLRNKFKNADDSAIDLLERMLVFDPKKRITATEALAHDYLSPYHDPTDEPVAEEKFDWSFNDADLPVDTWKIMMYSEIL 338          
BLAST of DY259925 vs. ExPASy Swiss-Prot
Match: MK14B_DROME (Mitogen-activated protein kinase 14B OS=Drosophila melanogaster GN=p38b PE=1 SV=1)

HSP 1 Score: 140.198 bits (352), Expect = 1.991e-32
Identity = 65/152 (42.76%), Postives = 94/152 (61.84%), Query Frame = 2
Query:    2 YTAAPYVWSVGCIFMELMNRRPLFPGNDHLHQMRLLIELLGTPTDADLGFVRNEDAKRYIRQLPQHPRQSLAQVFPHVHPLAIDLVDRMLTFDPMKRITVDEALAHPYLARLHDEADEPVCPEPFSFDFEQQSLGEEQIKDMIYQEALPLNP 457
            Y     +WSVGCI  EL+  R LFPG DH+HQ+ L++E+LGTP D  +  + +E A+ YIR LP  PR++   +F   +PLAIDL+++ML  D  KRIT ++ALAHPY+ + HD  DE      +   FE+  L  E+ ++M++ E     P
Sbjct:  203 YNQTADIWSVGCIMAELLTGRTLFPGTDHIHQLNLIMEVLGTPADEFMSRISSESARNYIRSLPVMPRRNFRDIFRGANPLAIDLLEKMLELDADKRITAEQALAHPYMEKYHDPTDEQTA-ALYDQSFEENELPVEKWREMVFSEVTAFKP 353          
BLAST of DY259925 vs. ExPASy Swiss-Prot
Match: HOG1_USTMA (Mitogen-activated protein kinase HOG1 OS=Ustilago maydis GN=HOG1 PE=3 SV=1)

HSP 1 Score: 140.198 bits (352), Expect = 1.991e-32
Identity = 66/148 (44.59%), Postives = 92/148 (62.16%), Query Frame = 2
Query:    2 YTAAPYVWSVGCIFMELMNRRPLFPGNDHLHQMRLLIELLGTPTDADLGFVRNEDAKRYIRQLPQHPRQSLAQVFPHVHPLAIDLVDRMLTFDPMKRITVDEALAHPYLARLHDEADEPVCPEPFSFDFEQQSLGEEQIKDMIYQEAL 445
            Y  A  VWS GCIF E++  +PLFPG DH++Q  ++ ELLGTP D  +  + +E+  R+++ LP+  R   +Q F +  P+A+DL+++ML FDP  RI+  EALAHPYLA  HD  DEP   E F + F    L  +  K M+Y E L
Sbjct:  191 YDVAVDVWSAGCIFAEMLEGKPLFPGKDHVNQFSIITELLGTPPDEVIKTICSENTLRFVQSLPKRERVPFSQKFKNADPMALDLLEKMLVFDPRTRISAAEALAHPYLAPYHDPTDEPEAEEAFDWSFNDADLPVDTWKVMMYSEIL 338          
The following BLAST results are available for this feature:
BLAST of DY259925 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 317
Match NameE-valueIdentityDescription
HOG1_COCHE4.012e-3345.77Mitogen-activated protein kinase HOG1 OS=Cochliobo... [more]
HOG1_SETTU5.240e-3345.07Mitogen-activated protein kinase HOG1 OS=Setosphae... [more]
HOG1_TRIAT6.843e-3347.18Mitogen-activated protein kinase hog1 OS=Trichoder... [more]
HOG1_ALTBR6.843e-3344.37Mitogen-activated protein kinase HOG1 OS=Alternari... [more]
ERKA_DROME6.843e-3343.24Mitogen-activated protein kinase ERK-A OS=Drosophi... [more]
MPK2_ARATH8.937e-3345.58Mitogen-activated protein kinase 2 OS=Arabidopsis ... [more]
HOG1_ARXAD8.937e-3345.07Mitogen-activated protein kinase hog1 OS=Arxula ad... [more]
HOG1_GIBZE1.524e-3246.48Mitogen-activated protein kinase HOG1 OS=Gibberell... [more]
MK14B_DROME1.991e-3242.76Mitogen-activated protein kinase 14B OS=Drosophila... [more]
HOG1_USTMA1.991e-3244.59Mitogen-activated protein kinase HOG1 OS=Ustilago ... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionKN0AAP10YK14FM1 Fruit-TF Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY259925 ID=DY259925; Name=DY259925; organism=Citrus clementina; type=EST; length=1070bp
CTACACTGCTGCCCCTTATGTGTGGTCTGTTGGCTGTATATTTATGGAGC
TTATGAACAGAAGGCCTCTGTTCCCAGGAAACGATCACTTGCATCAGATG
CGCTTATTGATAGAGCTTCTTGGAACACCAACAGATGCTGATCTGGGGTT
TGTCCGTAATGAGGATGCAAAAAGATATATACGACAACTTCCCCAACATC
CTCGTCAGTCGTTAGCCCAAGTTTTTCCACATGTTCATCCACTGGCTATT
GATCTTGTAGACAGAATGCTTACATTTGATCCCATGAAGAGAATTACTGT
TGACGAAGCACTAGCCCATCCTTATCTTGCAAGATTACATGATGAAGCCG
ATGAACCGGTCTGCCCAGAGCCATTTTCTTTTGATTTTGAGCAACAAAGC
CTGGGAGAAGAGCAAATAAAGGACATGATTTATCAGGAGGCATTACCACT
CAATCCAGGATTTGCTTAATAAAATAAACAGCACTGGTGCTCCGTTTTAA
TATTCACTATTTGTTTGTAATTCCATTAATTCAAGTGTTGCTCGGATGAA
AAGATGACTTTGAAGCCTTGAACCACTGCAGTTTGGCCGACAAATGTTAT
TTTTTCCCCTGCTGTACTATCACTCCTGCTGAAAATAATTAAATTCTCGA
ATTCTAATTTTTTTTGTTCCCCCTACCCTATTTCCACACAAAAAAACAAA
AATAATAACCCCACCTCTCCTTGCACCACTTTCGGCCTACACAGAAACCC
TTTGTTAATTATTTTTGTTTGCACCAATACAGTGACATACTTCCCCCAAC
TCCTCATCTTTCACTTGGCCACCTTCCTATATCCCCCCCTTCATGTATTG
ATAATTAATCTGTCTCCTCTGCTTTCGCCGTGCGCCCTACATCTCCCGCT
TTCCCCACACTCTCCCGACCACTACACACCTCTCATTCTACCTCACTCTC
TCTTTTCTCTCCATACCGATAATCCATTCCATCACCTATTCCAACTTCTC
CACCAACTCTCTTCCTCATCCGGCCATCTCACTTACTCGCCTTGACCTAT
GTTATATTTCCTATATCCTT
back to top