DY259925

Overview
NameDY259925
Unique NameDY259925
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length1070
Libraries
Library NameType
Fruit-TFcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig1358 contig Ccv1_Contig1358:1..1070. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of DY259925 vs. ExPASy Swiss-Prot
Match: HOG1_NEUCR (Mitogen-activated protein kinase hog-1 OS=Neurospora crassa GN=hog-1 PE=1 SV=1)

HSP 1 Score: 140.198 bits (352), Expect = 1.991e-32
Identity = 65/142 (45.77%), Postives = 89/142 (62.68%), Query Frame = 2
Query:   20 VWSVGCIFMELMNRRPLFPGNDHLHQMRLLIELLGTPTDADLGFVRNEDAKRYIRQLPQHPRQSLAQVFPHVHPLAIDLVDRMLTFDPMKRITVDEALAHPYLARLHDEADEPVCPEPFSFDFEQQSLGEEQIKDMIYQEAL 445
            +WS GCIF E++  +PLFPG DH++Q  ++ ELLGTP D  +  + +E+  R+++ LP+  RQ L   F +    A+DL++RML FDP KRIT  EAL+H YLA  HD  DEPV  E F + F    L  +  K M+Y E L
Sbjct:  197 IWSAGCIFAEMLEGKPLFPGKDHVNQFSIITELLGTPPDDVINTIASENTLRFVKSLPKRERQPLKNKFKNADSSAVDLLERMLVFDPKKRITATEALSHEYLAPYHDPTDEPVAEEKFDWSFNDADLPVDTWKIMMYSEIL 338          
BLAST of DY259925 vs. ExPASy Swiss-Prot
Match: HOG1_CHAGB (Mitogen-activated protein kinase HOG1 OS=Chaetomium globosum GN=HOG1 PE=3 SV=1)

HSP 1 Score: 140.198 bits (352), Expect = 1.991e-32
Identity = 66/142 (46.48%), Postives = 87/142 (61.27%), Query Frame = 2
Query:   20 VWSVGCIFMELMNRRPLFPGNDHLHQMRLLIELLGTPTDADLGFVRNEDAKRYIRQLPQHPRQSLAQVFPHVHPLAIDLVDRMLTFDPMKRITVDEALAHPYLARLHDEADEPVCPEPFSFDFEQQSLGEEQIKDMIYQEAL 445
            +WS GCIF E++  +PLFPG DH++Q  ++ ELLGTP D  +  + +E+  R+++ LP   RQ L   F +  P AIDL++RML FDP KRIT  EALAH YLA  HD  DEP     F + F    L  +  K M+Y E L
Sbjct:  197 IWSAGCIFAEMLEGKPLFPGKDHVNQFSIITELLGTPPDDVINTIASENTLRFVKSLPMRERQPLKNKFKNADPTAIDLLERMLVFDPKKRITATEALAHEYLAPYHDPTDEPTAELKFDWSFNDADLPVDTWKIMMYSEIL 338          
BLAST of DY259925 vs. ExPASy Swiss-Prot
Match: HOG1_BEABA (Mitogen-activated protein kinase HOG1 OS=Beauveria bassiana GN=HOG1 PE=3 SV=1)

HSP 1 Score: 140.198 bits (352), Expect = 1.991e-32
Identity = 66/142 (46.48%), Postives = 90/142 (63.38%), Query Frame = 2
Query:   20 VWSVGCIFMELMNRRPLFPGNDHLHQMRLLIELLGTPTDADLGFVRNEDAKRYIRQLPQHPRQSLAQVFPHVHPLAIDLVDRMLTFDPMKRITVDEALAHPYLARLHDEADEPVCPEPFSFDFEQQSLGEEQIKDMIYQEAL 445
            +WS GCIF E+++ +PLFPG DH++Q  ++ ELLGTP D  +  + +E+  R+++ LP+  RQ L   F +    AIDL++RML FDP KRIT  EAL+H YLA  HD  DEPV  E F + F    L  +  K M+Y E L
Sbjct:  197 IWSAGCIFAEMLDGKPLFPGKDHVNQFSIITELLGTPPDDVINTIASENTLRFVKSLPKRERQPLRNKFRNADDSAIDLMERMLVFDPKKRITAAEALSHDYLAPYHDPTDEPVAEEKFDWSFNDADLPVDTWKIMMYSEIL 338          
BLAST of DY259925 vs. ExPASy Swiss-Prot
Match: FUS3_YEAST (Mitogen-activated protein kinase FUS3 OS=Saccharomyces cerevisiae GN=FUS3 PE=1 SV=2)

HSP 1 Score: 140.198 bits (352), Expect = 1.991e-32
Identity = 70/151 (46.36%), Postives = 95/151 (62.91%), Query Frame = 2
Query:    2 YTAAPYVWSVGCIFMELMNRRPLFPGNDHLHQMRLLIELLGTP-TDADLGFVRNEDAKRYIRQLPQHPRQSLAQVFPHVHPLAIDLVDRMLTFDPMKRITVDEALAHPYLARLHDEAD----EPVCPEPFSFDFEQQSLGEEQIKDMIYQE 439
            Y+ A  VWS GCI  EL  RRP+FPG D+ HQ+ L+  ++GTP +D DL  + +  A+ YI+ LP +P   L ++FP V+P  IDL+ RML FDP KRIT  EAL HPYL   HD  D    EP+ P  F FD  +++L  + +K +I+ E
Sbjct:  200 YSRAMDVWSCGCILAELFLRRPIFPGRDYRHQLLLIFGIIGTPHSDNDLRCIESPRAREYIKSLPMYPAAPLEKMFPRVNPKGIDLLQRMLVFDPAKRITAKEALEHPYLQTYHDPNDEPEGEPIPPSFFEFDHYKEALTTKDLKKLIWNE 350          
BLAST of DY259925 vs. ExPASy Swiss-Prot
Match: HOG1_WALIC (Mitogen-activated protein kinase HOG1 (Fragment) OS=Wallemia ichthyophaga GN=HOG1 PE=3 SV=1)

HSP 1 Score: 139.428 bits (350), Expect = 3.396e-32
Identity = 64/144 (44.44%), Postives = 95/144 (65.97%), Query Frame = 2
Query:    2 YTAAPYVWSVGCIFMELMNRRPLFPGNDHLHQMRLLIELLGTPTDADLGFVRNEDAKRYIRQLPQHPRQSLAQVFPHVHPLAIDLVDRMLTFDPMKRITVDEALAHPYLARLHDEADEPVCPEPFSFDFEQQSLGEEQIKDMIY 433
            Y +A  +WSVGCIF E+++ RP+FPG DH+HQ+ ++ ELLG+P +  +  + +E+ +R++  LP+  + S A  FP+ +   IDL+++ML F+P KRIT  +ALAHPYLA  HD  DEP   E F + F    L  +Q K M+Y
Sbjct:  125 YDSAVDIWSVGCIFAEMIDGRPIFPGKDHVHQLTVITELLGSPPEDVINTITSENTRRFVDALPKRHKISFADRFPNANAEEIDLLEKMLDFNPKKRITAADALAHPYLAPYHDPEDEPTANERFDWSFNDADLPTDQWKVMMY 268          
BLAST of DY259925 vs. ExPASy Swiss-Prot
Match: HOG1_COCMI (Mitogen-activated protein kinase HOG1 OS=Cochliobolus miyabeanus GN=HOG1 PE=3 SV=1)

HSP 1 Score: 139.428 bits (350), Expect = 3.396e-32
Identity = 64/142 (45.07%), Postives = 90/142 (63.38%), Query Frame = 2
Query:   20 VWSVGCIFMELMNRRPLFPGNDHLHQMRLLIELLGTPTDADLGFVRNEDAKRYIRQLPQHPRQSLAQVFPHVHPLAIDLVDRMLTFDPMKRITVDEALAHPYLARLHDEADEPVCPEPFSFDFEQQSLGEEQIKDMIYQEAL 445
            +WS GCIF E++  +PLFPG DH++Q  ++ ELLGTP D  +  + +E+  R+++ LP+  RQ LA  F +  P A+DL++ ML FDP KR+  ++ALAH YLA  HD  DEPV  E F + F    L  +  K M+Y E L
Sbjct:  197 IWSAGCIFAEMLEGKPLFPGKDHVNQFSIITELLGTPPDDVIQTICSENTLRFVQSLPKRERQPLANKFKNAEPDAVDLLENMLVFDPRKRVRAEQALAHAYLAPYHDPTDEPVADEKFDWSFNDADLPVDTWKIMMYSEIL 338          
BLAST of DY259925 vs. ExPASy Swiss-Prot
Match: SLT2_YEAST (Mitogen-activated protein kinase SLT2/MPK1 OS=Saccharomyces cerevisiae GN=SLT2 PE=1 SV=2)

HSP 1 Score: 138.658 bits (348), Expect = 5.793e-32
Identity = 66/146 (45.21%), Postives = 95/146 (65.07%), Query Frame = 2
Query:    2 YTAAPYVWSVGCIFMELMNRRPLFPGNDHLHQMRLLIELLGTPTDADLGFVRNEDAKRYIRQLPQHPRQSLAQVFPHVHPLAIDLVDRMLTFDPMKRITVDEALAHPYLARLHDEADEPVCPEPFSFDFEQQSLGEEQIKDMIYQE 439
            YT A  VWS GCI  E +  +P+F G D+++Q+  ++++LGTP D  L  + +++ + YI QL   P+     ++P+ +  A+DL+++ML FDP KRITVDEAL HPYL+  HD ADEPVC E F F FE  +   E +K M+ QE
Sbjct:  210 YTKAIDVWSAGCILAEFLGGKPIFKGKDYVNQLNQILQVLGTPPDETLRRIGSKNVQDYIHQLGFIPKVPFVNLYPNANSQALDLLEQMLAFDPQKRITVDEALEHPYLSIWHDPADEPVCSEKFEFSFESVN-DMEDLKQMVIQE 354          
BLAST of DY259925 vs. ExPASy Swiss-Prot
Match: HOG1_ASPFU (Mitogen-activated protein kinase hog1 OS=Aspergillus fumigatus GN=hog1 PE=1 SV=1)

HSP 1 Score: 138.658 bits (348), Expect = 5.793e-32
Identity = 65/142 (45.77%), Postives = 89/142 (62.68%), Query Frame = 2
Query:   20 VWSVGCIFMELMNRRPLFPGNDHLHQMRLLIELLGTPTDADLGFVRNEDAKRYIRQLPQHPRQSLAQVFPHVHPLAIDLVDRMLTFDPMKRITVDEALAHPYLARLHDEADEPVCPEPFSFDFEQQSLGEEQIKDMIYQEAL 445
            +WS GCIF E++  +PLFPG DH++Q  ++ ELLGTP D  +  + +E+  R+++ LP+  RQ LA  F +  P A+DL++RML FDP KRI   EALAH YL+  HD  DEP   E F + F    L  +  K M+Y E L
Sbjct:  197 IWSAGCIFAEMLEGKPLFPGKDHVNQFSIITELLGTPPDDVIQTICSENTLRFVKSLPKRERQPLANKFKNADPEAVDLLERMLVFDPKKRIRAGEALAHEYLSPYHDPTDEPEAEEKFDWSFNDADLPVDTWKIMMYSEIL 338          
BLAST of DY259925 vs. ExPASy Swiss-Prot
Match: HOG1_WALMU (Mitogen-activated protein kinase HOG1 (Fragment) OS=Wallemia muriae GN=HOG1 PE=3 SV=1)

HSP 1 Score: 138.272 bits (347), Expect = 7.566e-32
Identity = 62/148 (41.89%), Postives = 97/148 (65.54%), Query Frame = 2
Query:    2 YTAAPYVWSVGCIFMELMNRRPLFPGNDHLHQMRLLIELLGTPTDADLGFVRNEDAKRYIRQLPQHPRQSLAQVFPHVHPLAIDLVDRMLTFDPMKRITVDEALAHPYLARLHDEADEPVCPEPFSFDFEQQSLGEEQIKDMIYQEAL 445
            Y +A  +WS+GCIF E+++ RP+FPG DH+HQ+ ++ ELLG+P +  +  + +E+ +R++  LP+  +    Q FP+ +   IDL+++ML F+P +RIT  +A+ HPYLA  HD +DEPV  E F + F    L  +Q K M+Y E L
Sbjct:  126 YDSAVDIWSIGCIFAEMIDGRPIFPGKDHVHQLTVITELLGSPPEDVINTITSENTRRFVDALPKREKIPFQQRFPNANEEEIDLLEKMLDFNPKERITAADAIQHPYLAPYHDPSDEPVANERFDWSFNDADLPVDQWKVMMYSEIL 273          
BLAST of DY259925 vs. ExPASy Swiss-Prot
Match: HOG1_TRIHA (Mitogen-activated protein kinase hog1 OS=Trichoderma harzianum GN=hog1 PE=1 SV=1)

HSP 1 Score: 138.272 bits (347), Expect = 7.566e-32
Identity = 64/142 (45.07%), Postives = 88/142 (61.97%), Query Frame = 2
Query:   20 VWSVGCIFMELMNRRPLFPGNDHLHQMRLLIELLGTPTDADLGFVRNEDAKRYIRQLPQHPRQSLAQVFPHVHPLAIDLVDRMLTFDPMKRITVDEALAHPYLARLHDEADEPVCPEPFSFDFEQQSLGEEQIKDMIYQEAL 445
            +WS GCIF E++  +PLFPG DH++Q  ++ ELLGTP D  +  + +E+  R+++ LP+  RQ L   F +    AIDL++RML FDP KR+T  +ALAH YL   HD  DEPV  E F + F    L  +  K M+Y E L
Sbjct:  197 IWSAGCIFAEMLEGKPLFPGKDHVNQFSIITELLGTPPDDVINTIASENTLRFVKSLPKRERQPLRNKFKNADDSAIDLLERMLVFDPKKRVTATQALAHEYLQPYHDPTDEPVADEKFDWSFNDADLPVDTWKIMMYSEIL 338          
The following BLAST results are available for this feature:
BLAST of DY259925 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 317
Match NameE-valueIdentityDescription
HOG1_NEUCR1.991e-3245.77Mitogen-activated protein kinase hog-1 OS=Neurospo... [more]
HOG1_CHAGB1.991e-3246.48Mitogen-activated protein kinase HOG1 OS=Chaetomiu... [more]
HOG1_BEABA1.991e-3246.48Mitogen-activated protein kinase HOG1 OS=Beauveria... [more]
FUS3_YEAST1.991e-3246.36Mitogen-activated protein kinase FUS3 OS=Saccharom... [more]
HOG1_WALIC3.396e-3244.44Mitogen-activated protein kinase HOG1 (Fragment) O... [more]
HOG1_COCMI3.396e-3245.07Mitogen-activated protein kinase HOG1 OS=Cochliobo... [more]
SLT2_YEAST5.793e-3245.21Mitogen-activated protein kinase SLT2/MPK1 OS=Sacc... [more]
HOG1_ASPFU5.793e-3245.77Mitogen-activated protein kinase hog1 OS=Aspergill... [more]
HOG1_WALMU7.566e-3241.89Mitogen-activated protein kinase HOG1 (Fragment) O... [more]
HOG1_TRIHA7.566e-3245.07Mitogen-activated protein kinase hog1 OS=Trichoder... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionKN0AAP10YK14FM1 Fruit-TF Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY259925 ID=DY259925; Name=DY259925; organism=Citrus clementina; type=EST; length=1070bp
CTACACTGCTGCCCCTTATGTGTGGTCTGTTGGCTGTATATTTATGGAGC
TTATGAACAGAAGGCCTCTGTTCCCAGGAAACGATCACTTGCATCAGATG
CGCTTATTGATAGAGCTTCTTGGAACACCAACAGATGCTGATCTGGGGTT
TGTCCGTAATGAGGATGCAAAAAGATATATACGACAACTTCCCCAACATC
CTCGTCAGTCGTTAGCCCAAGTTTTTCCACATGTTCATCCACTGGCTATT
GATCTTGTAGACAGAATGCTTACATTTGATCCCATGAAGAGAATTACTGT
TGACGAAGCACTAGCCCATCCTTATCTTGCAAGATTACATGATGAAGCCG
ATGAACCGGTCTGCCCAGAGCCATTTTCTTTTGATTTTGAGCAACAAAGC
CTGGGAGAAGAGCAAATAAAGGACATGATTTATCAGGAGGCATTACCACT
CAATCCAGGATTTGCTTAATAAAATAAACAGCACTGGTGCTCCGTTTTAA
TATTCACTATTTGTTTGTAATTCCATTAATTCAAGTGTTGCTCGGATGAA
AAGATGACTTTGAAGCCTTGAACCACTGCAGTTTGGCCGACAAATGTTAT
TTTTTCCCCTGCTGTACTATCACTCCTGCTGAAAATAATTAAATTCTCGA
ATTCTAATTTTTTTTGTTCCCCCTACCCTATTTCCACACAAAAAAACAAA
AATAATAACCCCACCTCTCCTTGCACCACTTTCGGCCTACACAGAAACCC
TTTGTTAATTATTTTTGTTTGCACCAATACAGTGACATACTTCCCCCAAC
TCCTCATCTTTCACTTGGCCACCTTCCTATATCCCCCCCTTCATGTATTG
ATAATTAATCTGTCTCCTCTGCTTTCGCCGTGCGCCCTACATCTCCCGCT
TTCCCCACACTCTCCCGACCACTACACACCTCTCATTCTACCTCACTCTC
TCTTTTCTCTCCATACCGATAATCCATTCCATCACCTATTCCAACTTCTC
CACCAACTCTCTTCCTCATCCGGCCATCTCACTTACTCGCCTTGACCTAT
GTTATATTTCCTATATCCTT
back to top