DY259931

Overview
NameDY259931
Unique NameDY259931
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length1037
Libraries
Library NameType
Fruit-TFcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of DY259931 vs. ExPASy Swiss-Prot
Match: PEM3_PHACH (Manganese peroxidase H3 OS=Phanerochaete chrysosporium PE=1 SV=2)

HSP 1 Score: 68.9366 bits (167), Expect = 5.377e-11
Identity = 48/166 (28.92%), Postives = 76/166 (45.78%), Query Frame = 1 
Query:  160 MLRIAWHSAGTYDVKT--KTGGPFGTMRL--AAEQAHSANNGLDIAVRLLEPFKEQFPTISYADLYQLAGVVGV-EVTGGPDIPFHPGRDDKAEPPQEGRLPDAKQGNDHLRQVFGAQMGLSDKDIVALSGGHTLGRCHKERSGFE-GPWTRNPLIFDNSYFTELL 639
            ++R+ +H A           GG  G+M L    E   SANNG+D +V  L PF ++  TIS  D+ Q  G V +    G P + F   R +K  P  +G +P+ +     + + F      S  ++V+L   H++ R  K     +  P+   P +FD   F E+L
Sbjct:   65 VIRLTFHDAIAISQSKGPSAGGADGSMLLFPTIEPNFSANNGIDDSVNNLIPFMQKHNTISAGDIVQFTGAVALTNCPGAPQLEFLARRPNKTIPAIDGLIPEPQDSVTSILERFKDAGNFSPFEVVSLLASHSVARADKVDETIDAAPFDTTPFVFDTQIFLEVL 230
[Close]
BLAST of DY259931 vs. ExPASy Swiss-Prot
Match: PEM2_PHLRA (Manganese peroxidase 2 OS=Phlebia radiata GN=mnp2 PE=1 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 7.022e-11
Identity = 47/146 (32.19%), Postives = 67/146 (45.89%), Query Frame = 1 
Query:  214 GGPFGTMRL--AAEQAHSANNGLDIAVRLLEPFKEQFPTISYADLYQLAGVVGV-EVTGGPDIPFHPGRDDKAEPPQEGRLPDAKQGNDHLRQVFGAQMGLSDKDIVALSGGHTLGRC-HKERSGFEGPWTRNPLIFDNSYFTELL 639
            GG  G+M +    E A   N G+  +V  L PF  QFPTIS  DL Q AG V +    G P + F  GR +   P  +G +P+ +     +   F      S  ++VAL   H++ R  H + +    P+   P  FD   F E+L
Sbjct:   85 GGADGSMLIFPTVEPAFFPNLGIADSVNNLIPFLSQFPTISAGDLVQFAGAVAISNCPGAPQLEFLAGRPNATAPAIDGLIPEPQDDVTKILARFKDAGNFSPAEVVALLASHSIARADHVDPTLDAAPFDSTPFDFDTQIFLEVL 230
The following BLAST results are available for this feature:
BLAST of DY259931 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 82
Match NameE-valueIdentityDescription
PEM3_PHACH5.377e-1128.92Manganese peroxidase H3 OS=Phanerochaete chrysospo... [more]
PEM2_PHLRA7.022e-1132.19Manganese peroxidase 2 OS=Phlebia radiata GN=mnp2 ... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAP10YK22FM1 Fruit-TF Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY259931 ID=DY259931; Name=DY259931; organism=Citrus clementina; type=EST; length=1037bp
CTCGTTTGTTAAGGATTTGCGTCTCTCTTTCTCATTTCATTCAGCGTTGA
AAAGATGACGAAGAATTACCCCACTGTTAGCGAGGATTACAAGAAGGCCG
TGGAGAAATGCAAGAGGAAGCTCAGAGGCTTCATCGCTGAGAAGAACTGC
GCTCCACTCATGCTCCGTATCGCGTGGCACTCAGCTGGTACATATGATGT
GAAGACCAAGACCGGAGGTCCATTCGGAACCATGAGGCTCGCTGCTGAGC
AGGCACACTCAGCCAACAACGGCCTCGATATTGCCGTTAGGCTTTTGGAG
CCGTTCAAGGAGCAGTTCCCTACCATCTCCTACGCTGACCTTTATCAGCT
TGCTGGTGTTGTTGGCGTTGAGGTTACCGGTGGGCCCGATATCCCCTTCC
ACCCTGGAAGAGATGACAAGGCTGAGCCACCTCAAGAAGGCCGGCTTCCT
GATGCTAAACAGGGTAATGATCACTTGAGGCAAGTCTTTGGTGCTCAGAT
GGGCCTCAGCGACAAGGATATTGTTGCTCTCTCTGGTGGCCACACCCTGG
GAAGGTGCCACAAGGAGAGGTCTGGATTTGAGGGACCATGGACCCGCAAC
CCTCTCATTTTTGACAATTCCTACTTCACGGAGCTCTTGACTGGTGAGAA
GGATGGTCTTCTGCAATTGCCCTCCGACAAGGCCCTTCTGGATGACCCTG
TTTTCCGCCCTCTTGTTGAGAAATATGCTGCGGATGAGGACGCCTTCTTC
GCTGATTATGCCGAGGCTCATCCTCAAGCTCCCCTGAGCTAGGATTTGCT
GAAGCCCAAATTTACCTGAGTAAATAAATGGGTGGAATGATGCCCACCAC
CCGTGGGGCCCCATTTTATGTTTTTTGAATTCCCCAAAAAATTCCAATTT
TCAGAAGTTTGTGGGGGGGAATTTTGGGGTTTTTTTTTTTGCTGCCCAGG
GCGGAATTGGGAAAATGTTGGGGCCCAAAAACTAGCGGCACACATCACAC
CCCATTAGAAACCCCAAAACCCACAACCTGCTCTTCA
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