DY259936

Overview
NameDY259936
Unique NameDY259936
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length899
Libraries
Library NameType
Fruit-TFcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY259936 vs. ExPASy Swiss-Prot
Match: ASNS_MOUSE (Asparagine synthetase [glutamine-hydrolyzing] OS=Mus musculus GN=Asns PE=2 SV=3)

HSP 1 Score: 98.5969 bits (244), Expect = 5.152e-20
Identity = 62/169 (36.69%), Postives = 92/169 (54.44%), Query Frame = 3
Query:   27 MCGILAVFGCIDNSQAKXXXXXXXXXXXXXXGPD---WSGLHYHGDCYLAHQRLAIVDPTSGDQPL-YNEDKTVVVTVNGEIYNHKQLREQLKNHQFRTGSDCEVIAHLYEEHG-EEFVDMLDGMFSFVLLDTRDKSFIAARDAVGVTPLYMGWGLDGSIWFASEMKAL 518
            MCGI A+FG  D    +              GPD   +  ++ + +C     RLA+VDP  G QP+   +   + +  NGEIYNHK L+++ +  +++T  D E+I HLY++ G E+ + MLDG+F+F+LLDT +K     RD  GV PL+     DG +   SE K L
Sbjct:    1 MCGIWALFGSDDCLSVQCLSAMKIAHR----GPDAFRFENVNGYTNCCFGFHRLAVVDPLFGMQPIRVRKYPYLWLCYNGEIYNHKALQQRFE-FEYQTNVDGEIILHLYDKGGIEKTICMLDGVFAFILLDTANKKVFLGRDTYGVRPLFKAMTEDGFLAVCSEAKGL 164          
BLAST of DY259936 vs. ExPASy Swiss-Prot
Match: ASNS_RAT (Asparagine synthetase [glutamine-hydrolyzing] OS=Rattus norvegicus GN=Asns PE=2 SV=3)

HSP 1 Score: 98.2117 bits (243), Expect = 6.729e-20
Identity = 62/169 (36.69%), Postives = 92/169 (54.44%), Query Frame = 3
Query:   27 MCGILAVFGCIDNSQAKXXXXXXXXXXXXXXGPD---WSGLHYHGDCYLAHQRLAIVDPTSGDQPL-YNEDKTVVVTVNGEIYNHKQLREQLKNHQFRTGSDCEVIAHLYEEHG-EEFVDMLDGMFSFVLLDTRDKSFIAARDAVGVTPLYMGWGLDGSIWFASEMKAL 518
            MCGI A+FG  D    +              GPD   +  ++ + +C     RLA+VDP  G QP+   +   + +  NGEIYNHK L+++ +  +++T  D E+I HLY++ G E+ + MLDG+F+F+LLDT +K     RD  GV PL+     DG +   SE K L
Sbjct:    1 MCGIWALFGSDDCLSVQCLSAMKIAHR----GPDAFRFENVNGYTNCCFGFHRLAVVDPLFGMQPIRVRKYPYLWLCYNGEIYNHKALQQRFE-FEYQTNVDGEIILHLYDKGGIEKTICMLDGVFAFILLDTANKKVFLGRDTYGVRPLFKALTEDGFLAVCSEAKGL 164          
BLAST of DY259936 vs. ExPASy Swiss-Prot
Match: ASNS_HUMAN (Asparagine synthetase [glutamine-hydrolyzing] OS=Homo sapiens GN=ASNS PE=1 SV=4)

HSP 1 Score: 98.2117 bits (243), Expect = 6.729e-20
Identity = 62/169 (36.69%), Postives = 92/169 (54.44%), Query Frame = 3
Query:   27 MCGILAVFGCIDNSQAKXXXXXXXXXXXXXXGPD---WSGLHYHGDCYLAHQRLAIVDPTSGDQPLYNEDKTVV-VTVNGEIYNHKQLREQLKNHQFRTGSDCEVIAHLYEEHG-EEFVDMLDGMFSFVLLDTRDKSFIAARDAVGVTPLYMGWGLDGSIWFASEMKAL 518
            MCGI A+FG  D    +              GPD   +  ++ + +C     RLA+VDP  G QP+  +    + +  NGEIYNHK++++  +  +++T  D E+I HLY++ G E+ + MLDG+F+FVLLDT +K     RD  GV PL+     DG +   SE K L
Sbjct:    1 MCGIWALFGSDDCLSVQCLSAMKIAHR----GPDAFRFENVNGYTNCCFGFHRLAVVDPLFGMQPIRVKKYPYLWLCYNGEIYNHKKMQQHFE-FEYQTKVDGEIILHLYDKGGIEQTICMLDGVFAFVLLDTANKKVFLGRDTYGVRPLFKAMTEDGFLAVCSEAKGL 164          
BLAST of DY259936 vs. ExPASy Swiss-Prot
Match: ASNS_PONAB (Asparagine synthetase [glutamine-hydrolyzing] OS=Pongo abelii GN=ASNS PE=2 SV=3)

HSP 1 Score: 97.4413 bits (241), Expect = 1.148e-19
Identity = 62/169 (36.69%), Postives = 91/169 (53.85%), Query Frame = 3
Query:   27 MCGILAVFGCIDNSQAKXXXXXXXXXXXXXXGPD---WSGLHYHGDCYLAHQRLAIVDPTSGDQPLYNEDKTVV-VTVNGEIYNHKQLREQLKNHQFRTGSDCEVIAHLYEEHG-EEFVDMLDGMFSFVLLDTRDKSFIAARDAVGVTPLYMGWGLDGSIWFASEMKAL 518
            MCGI A+FG  D    +              GPD   +  ++ + +C     RLA+VDP  G QP+  +    + +  NGEIYNHK++++  +  +++T  D E+I HLY++ G E+ + MLDG+F+FVLLDT  K     RD  GV PL+     DG +   SE K L
Sbjct:    1 MCGIWALFGSDDCLSVQCLSAMKIAHR----GPDAFRFENVNGYTNCCFGFHRLAVVDPLFGMQPIRVKKYPYLWLCYNGEIYNHKKMQQHFE-FEYQTKVDGEIILHLYDKGGIEQTICMLDGVFAFVLLDTATKKVFLGRDTYGVRPLFKAMTEDGFLAVCSEAKGL 164          
BLAST of DY259936 vs. ExPASy Swiss-Prot
Match: ASNB_BACSU (Asparagine synthetase [glutamine-hydrolyzing] 1 OS=Bacillus subtilis GN=asnB PE=1 SV=2)

HSP 1 Score: 97.4413 bits (241), Expect = 1.148e-19
Identity = 60/168 (35.71%), Postives = 86/168 (51.19%), Query Frame = 3
Query:   27 MCGILAVFGCIDNSQA--KXXXXXXXXXXXXXXGPDWSGLHYHGDCYLAHQRLAIVDPTSGDQPLYNEDKTVVVTVNGEIYNHKQLREQL--KNHQFRTGSDCEVIAHLYEEHGEEFVDMLDGMFSFVLLDTRDKSFIAARDAVGVTPLYMGWGLDGSIWFASEMKAL 518
            MCG + VF     +Q   +              GPD  G  +        +RL+I+D  +G QPL  ED+T  +  NGEIYN+ +LRE+L  K + F T SD EV+   Y  + EE    L GMF+F++ +  D     ARD  G+ PLY    ++  ++FASE K+L
Sbjct:    1 MCGFVGVFNKHPLAQTADQEELIKQMNQMIVHRGPDSDGYFHDEHVGFGFRRLSIIDVENGGQPLSYEDETYWIIFNGEIYNYIELREELEAKGYTFNTDSDTEVLLATYRHYKEEAASKLRGMFAFLIWNKNDHVLYGARDPFGIKPLYY-TTINDQVYFASERKSL 167          
BLAST of DY259936 vs. ExPASy Swiss-Prot
Match: ASNS_BOVIN (Asparagine synthetase [glutamine-hydrolyzing] OS=Bos taurus GN=ASNS PE=2 SV=3)

HSP 1 Score: 95.1301 bits (235), Expect = 5.696e-19
Identity = 62/169 (36.69%), Postives = 90/169 (53.25%), Query Frame = 3
Query:   27 MCGILAVFGCIDNSQAKXXXXXXXXXXXXXXGPD---WSGLHYHGDCYLAHQRLAIVDPTSGDQPLYNEDKTVV-VTVNGEIYNHKQLREQLKNHQFRTGSDCEVIAHLYEEHG-EEFVDMLDGMFSFVLLDTRDKSFIAARDAVGVTPLYMGWGLDGSIWFASEMKAL 518
            MCGI A+FG  D    +              GPD   +  ++ + +C     RLA+VD   G QP+  +    + +  NGEIYNHK+L+   +  +++T  D E+I HLY++ G E+ V MLDG+F+F+LLDT +K     RD  GV PL+     DG +   SE K L
Sbjct:    1 MCGIWALFGSDDCLSVQCLSAMKIAHR----GPDAFRFENVNGYTNCCFGFHRLAVVDQLFGMQPIRVKKYPYLWLCYNGEIYNHKKLQHHFE-FEYQTKVDGEIILHLYDKGGIEQTVCMLDGVFAFILLDTANKKVFLGRDTYGVRPLFKAMTEDGFLAVCSEAKGL 164          
BLAST of DY259936 vs. ExPASy Swiss-Prot
Match: ASNS_CHICK (Asparagine synthetase [glutamine-hydrolyzing] OS=Gallus gallus GN=ASNS PE=2 SV=3)

HSP 1 Score: 92.4337 bits (228), Expect = 3.692e-18
Identity = 69/189 (36.51%), Postives = 92/189 (48.68%), Query Frame = 3
Query:   27 MCGILAVFGCIDNSQAKXXXXXXXXXXXXXXGPD---WSGLHYHGDCYLAHQRLAIVDPTSGDQPL-YNEDKTVVVTVNGEIYNHKQLREQLKNHQFRTGSDCEVIAHLYEEHG-EEFVDMLDGMFSFVLLDTRDKSFIAARDAVGVTPLYMGWGLDGSIWFASEMKALSDDCERFISFP------PGH 560
            MCGI A+FG    S                 GPD   +  ++   +C     RLA+VD   G QP+   +   + +  NGEIYN KQL+EQ    +++T  D EVI HLY   G E+   MLDG+F+F+LLDT ++    ARD  GV PL+     DG +   SE K L +       FP      PGH
Sbjct:    1 MCGIWALFG----SDECLSVQCLSAMKIAHRGPDAFRFENVNGFTNCCFGFHRLAVVDQLYGMQPIRVKKFPYLWLCYNGEIYNFKQLQEQF-GFEYQTLVDGEVILHLYNRGGIEQTASMLDGVFAFILLDTANRKVFLARDTYGVRPLFKVLTDDGFLGVCSEAKGLINLKHSTSLFPKVEPFLPGH 184          
BLAST of DY259936 vs. ExPASy Swiss-Prot
Match: ASNO_BACSU (Asparagine synthetase [glutamine-hydrolyzing] 3 OS=Bacillus subtilis GN=asnO PE=1 SV=3)

HSP 1 Score: 89.3521 bits (220), Expect = 3.126e-17
Identity = 56/139 (40.29%), Postives = 80/139 (57.55%), Query Frame = 3
Query:  120 GPDWSGLHYHGDCYLAHQRLAIVDPTSGDQPL---YNEDKTVVVTVNGEIYNHKQLREQLK--NHQFRTGSDCEVIAHLYEEHGEEFVDMLDGMFSFVLLDTRDKSFIAARDAVGVTPLYMGWGLDGSIW-FASEMKAL 518
            GPD S +         H+RLA+VD   G QP+   Y  D T  +  NGE+YN + LR++L+   HQF   SD EV+ H Y E  E+ VD L+G+F+F + D +     AARD +GV P +  +  +GS + F SE+KA+
Sbjct:   32 GPDDSNVWGEHHVLFGHKRLAVVDIEGGRQPMACTYKGD-TYTIIYNGELYNTEDLRKELRARGHQFERTSDTEVLLHSYIEWQEDCVDHLNGIFAFAVWDEKRNLLFAARDRLGVKPFF--YTKEGSSFLFGSEIKAI 167          
BLAST of DY259936 vs. ExPASy Swiss-Prot
Match: ASNH_MYCTU (Putative asparagine synthetase [glutamine-hydrolyzing] OS=Mycobacterium tuberculosis GN=asnB PE=3 SV=1)

HSP 1 Score: 77.0258 bits (188), Expect = 1.605e-13
Identity = 53/147 (36.05%), Postives = 69/147 (46.94%), Query Frame = 3
Query:  120 GPDWSGLHY-----HGDCYLAHQRLAIVDPTSGDQPLY----NEDKTVVVTVNGEIYNHKQLREQLKNHQ---FRTGSDCEVIAHLYEEHGEEFVDMLDGMFSFVLLDTRDKSFIAARDAVGVTPLYMGWGLDGSIWFASEMKALSD 524
            GPD SG  +      G       RL+I+D     QPL           V+  NGEIYN+ +LR++L+      F T  D E I   Y   G E +  L GMF+F L DT  +    ARD  G+ PL++  G  G+   ASE K L D
Sbjct:   37 GPDESGTWHAVDGASGGVVFGFNRLSIIDIAHSHQPLRWGPPEAPDRYVLVFNGEIYNYLELRDELRTQHGAVFATDGDGEAILAGYHHWGTEVLQRLRGMFAFALWDTVTRELFCARDPFGIKPLFIATGAGGTA-VASEKKCLLD 182          
BLAST of DY259936 vs. ExPASy Swiss-Prot
Match: ASNH_MYCBO (Putative asparagine synthetase [glutamine-hydrolyzing] OS=Mycobacterium bovis GN=asnB PE=1 SV=1)

HSP 1 Score: 77.0258 bits (188), Expect = 1.605e-13
Identity = 53/147 (36.05%), Postives = 69/147 (46.94%), Query Frame = 3
Query:  120 GPDWSGLHY-----HGDCYLAHQRLAIVDPTSGDQPLY----NEDKTVVVTVNGEIYNHKQLREQLKNHQ---FRTGSDCEVIAHLYEEHGEEFVDMLDGMFSFVLLDTRDKSFIAARDAVGVTPLYMGWGLDGSIWFASEMKALSD 524
            GPD SG  +      G       RL+I+D     QPL           V+  NGEIYN+ +LR++L+      F T  D E I   Y   G E +  L GMF+F L DT  +    ARD  G+ PL++  G  G+   ASE K L D
Sbjct:   37 GPDESGTWHAVDGASGGVVFGFNRLSIIDIAHSHQPLRWGPPEAPDRYVLVFNGEIYNYLELRDELRTQHGAVFATDGDGEAILAGYHHWGTEVLQRLRGMFAFALWDTVTRELFCARDPFGIKPLFIATGAGGTA-VASEKKCLLD 182          
The following BLAST results are available for this feature:
BLAST of DY259936 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 32
Match NameE-valueIdentityDescription
ASNS_MOUSE5.152e-2036.69Asparagine synthetase [glutamine-hydrolyzing] OS=M... [more]
ASNS_RAT6.729e-2036.69Asparagine synthetase [glutamine-hydrolyzing] OS=R... [more]
ASNS_HUMAN6.729e-2036.69Asparagine synthetase [glutamine-hydrolyzing] OS=H... [more]
ASNS_PONAB1.148e-1936.69Asparagine synthetase [glutamine-hydrolyzing] OS=P... [more]
ASNB_BACSU1.148e-1935.71Asparagine synthetase [glutamine-hydrolyzing] 1 OS... [more]
ASNS_BOVIN5.696e-1936.69Asparagine synthetase [glutamine-hydrolyzing] OS=B... [more]
ASNS_CHICK3.692e-1836.51Asparagine synthetase [glutamine-hydrolyzing] OS=G... [more]
ASNO_BACSU3.126e-1740.29Asparagine synthetase [glutamine-hydrolyzing] 3 OS... [more]
ASNH_MYCTU1.605e-1336.05Putative asparagine synthetase [glutamine-hydrolyz... [more]
ASNH_MYCBO1.605e-1336.05Putative asparagine synthetase [glutamine-hydrolyz... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAP10YL03FM1 Fruit-TF Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY259936 ID=DY259936; Name=DY259936; organism=Citrus clementina; type=EST; length=899bp
CTCATTTTTCGCGCTTTCCCGCCGCCATGTGTGGGATTCTCGCCGTGTTC
GGCTGCATTGACAACTCTCAAGCAAAACGCTCCCGTATCATCGAGCTCTC
CAGAAGGTTGCGGCACAGAGGTCCTGATTGGAGTGGCCTGCACTATCATG
GGGATTGTTATCTAGCACACCAGCGATTGGCTATTGTAGACCCTACTTCT
GGGGATCAGCCACTTTACAACGAAGACAAGACAGTTGTTGTCACGGTGAA
TGGGGAGATTTATAACCACAAGCAACTTAGGGAACAACTAAAGAATCATC
AGTTCCGAACTGGGAGTGACTGTGAAGTGATTGCCCACCTTTATGAAGAA
CATGGAGAAGAATTTGTTGACATGTTGGATGGCATGTTCTCTTTTGTTCT
CCTCGACACCCGGGACAAAAGCTTCATTGCAGCTCGGGATGCTGTCGGTG
TTACGCCACTATATATGGGCTGGGGTCTTGATGGATCAATATGGTTTGCT
TCAGAAATGAAAGCTTTGAGTGATGATTGTGAGCGATTCATTTCTTTCCC
TCCAGGGCATATTTATTCTAGCCAACAAGGAGGAGTAAGAAGATGGTATA
CCCACCAGGGTACTCGGAACAAATCCCTTCAATTCCTATGACCCCCTGGT
TTACCTAAGGCCTTTGAAAAGCTGGGGTTAAAAAAATTATGACGGAAGAC
CCTTTGGTGTGGTTTTGCCTGGGGAACTGAACCCCCCCCTGGTTGGGGCG
GGGCCACCCCTCTTTTTACCCAACTCAAAACTCGCTGCCTGGGGGGACAC
ATTGTCACCCTTTTGCCATGGTTGGAAAGAAACCCAAATTCACAACCCCC
AAAAAAGGGACAAAAACTATGGAACCCTCCCCAGAATTTTCCCTCCACT
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