DY259936

Overview
NameDY259936
Unique NameDY259936
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length899
Libraries
Library NameType
Fruit-TFcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of DY259936 vs. ExPASy Swiss-Prot
Match: ASNH2_METJA (Putative asparagine synthetase [glutamine-hydrolyzing] 2 OS=Methanocaldococcus jannaschii GN=MJ1056 PE=3 SV=3)

HSP 1 Score: 77.0258 bits (188), Expect = 1.605e-13
Identity = 53/153 (34.64%), Postives = 82/153 (53.59%), Query Frame = 3 
Query:  120 GPDWSGLHYHG----DCYLAHQRLAIVDPTS-GDQPL-YNEDKT-------------VVVTVNGEIYNHKQLREQLKNHQFRTGSDCEVIAHLYEEHGEEFVDMLDGMFSFVLLDTRDKSFIAARDAVGVTPLYMGWGLDGSIW-FASEMKAL 518
            GPD  G+  +        L H RLAI+D +  G QP+ YN D+              +++  NGEIYN+ +L+E+  N +  TG+D EVI  LY + G + V   +GM++F + D +      +RD +GV P Y  W  DG+ + F+SE+K +
Sbjct:   30 GPDDEGIFIYNFKNYSIGLGHVRLAILDLSEKGHQPMGYNVDEDKIIYRDDELDRADIIIVYNGEIYNYLELKEKF-NLETETGTDTEVILKLYNKLGFDCVKEFNGMWAFCIFDKKKGLIFCSRDRLGVKPFYYYW--DGNEFIFSSELKGI 179
[Close]
BLAST of DY259936 vs. ExPASy Swiss-Prot
Match: ASNS_MIMIV (Probable asparagine synthetase [glutamine-hydrolyzing] OS=Acanthamoeba polyphaga mimivirus GN=MIMI_R475 PE=3 SV=3)

HSP 1 Score: 76.6406 bits (187), Expect = 2.096e-13
Identity = 46/122 (37.70%), Postives = 69/122 (56.56%), Query Frame = 3 
Query:  159 YLAHQRLAIVDPTSGDQPLYNEDKTVVVTVNGEIYNHKQLREQLKNHQFRTGSDCEVIAHLYEEHG-EEFVDMLDGMFSFVLLDTRDKSFIAARDAVGVTPLYMGWGLD-GSIWFASEMKAL 518
            +L   RLAI+D +      + ++ +     NGEIYN+K L E+  N + ++  DCE++  L+   G E  +  LD  F+ V++D  +    AARD  GV PLY G+  + G I FASE+KAL
Sbjct:   48 FLGFTRLAIMDTSEAGLQPFKDNNSNYSICNGEIYNYKNLAEKF-NIEMQSQCDCEILLPLFNLRGFEGLLSDLDAEFATVIVDKYNSKLYAARDKYGVRPLYYGYNCEKGLIGFASELKAL 168
The following BLAST results are available for this feature:
BLAST of DY259936 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 32
Match NameE-valueIdentityDescription
ASNH2_METJA1.605e-1334.64Putative asparagine synthetase [glutamine-hydrolyz... [more]
ASNS_MIMIV2.096e-1337.70Probable asparagine synthetase [glutamine-hydrolyz... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAP10YL03FM1 Fruit-TF Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY259936 ID=DY259936; Name=DY259936; organism=Citrus clementina; type=EST; length=899bp
CTCATTTTTCGCGCTTTCCCGCCGCCATGTGTGGGATTCTCGCCGTGTTC
GGCTGCATTGACAACTCTCAAGCAAAACGCTCCCGTATCATCGAGCTCTC
CAGAAGGTTGCGGCACAGAGGTCCTGATTGGAGTGGCCTGCACTATCATG
GGGATTGTTATCTAGCACACCAGCGATTGGCTATTGTAGACCCTACTTCT
GGGGATCAGCCACTTTACAACGAAGACAAGACAGTTGTTGTCACGGTGAA
TGGGGAGATTTATAACCACAAGCAACTTAGGGAACAACTAAAGAATCATC
AGTTCCGAACTGGGAGTGACTGTGAAGTGATTGCCCACCTTTATGAAGAA
CATGGAGAAGAATTTGTTGACATGTTGGATGGCATGTTCTCTTTTGTTCT
CCTCGACACCCGGGACAAAAGCTTCATTGCAGCTCGGGATGCTGTCGGTG
TTACGCCACTATATATGGGCTGGGGTCTTGATGGATCAATATGGTTTGCT
TCAGAAATGAAAGCTTTGAGTGATGATTGTGAGCGATTCATTTCTTTCCC
TCCAGGGCATATTTATTCTAGCCAACAAGGAGGAGTAAGAAGATGGTATA
CCCACCAGGGTACTCGGAACAAATCCCTTCAATTCCTATGACCCCCTGGT
TTACCTAAGGCCTTTGAAAAGCTGGGGTTAAAAAAATTATGACGGAAGAC
CCTTTGGTGTGGTTTTGCCTGGGGAACTGAACCCCCCCCTGGTTGGGGCG
GGGCCACCCCTCTTTTTACCCAACTCAAAACTCGCTGCCTGGGGGGACAC
ATTGTCACCCTTTTGCCATGGTTGGAAAGAAACCCAAATTCACAACCCCC
AAAAAAGGGACAAAAACTATGGAACCCTCCCCAGAATTTTCCCTCCACT
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