DY259937

Overview
NameDY259937
Unique NameDY259937
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length1073
Libraries
Library NameType
Fruit-TFcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY259937 vs. ExPASy Swiss-Prot
Match: PIMT_METJA (Protein-L-isoaspartate O-methyltransferase OS=Methanocaldococcus jannaschii GN=pcm PE=1 SV=1)

HSP 1 Score: 95.1301 bits (235), Expect = 7.376e-19
Identity = 64/171 (37.43%), Postives = 89/171 (52.05%), Query Frame = 2
Query:  212 KNKAMVEHLQHYGVITSKKVSEVMETIDRACFVPDGTPPY--VDSPMAIGYNATISAPHMHATCLQLLEENLKPGMHALDIGSGTGYLTACFALMVGPQGRAVGVEHLPELVASSIQNIEKSAAAPLLKKGSPSLHVGDGKKGGPNLPPMKQYIGRTAPPQNPPALIDPLK 718
            + KA++E L   G I SK+V + +  + R  F+P+    Y  VD+P+ IGY  TISA HM     +LL+  LKPGM  L+IG+G GY  A  A +VG  G  V +E +PEL   + + + K      L   +  + VGDG  G   L P  +     A P+ P  LI  LK
Sbjct:    6 QKKAVIEKLIREGYIKSKRVIDALLKVPREEFLPEHLKEYAYVDTPLEIGYGQTISAIHMVGMMCELLD--LKPGMKVLEIGTGCGYHAAVTAEIVGEDGLVVSIERIPELAEKAERTLRK------LGYDNVIVIVGDGTLGYEPLAPYDRIYTTAAGPKIPEPLIRQLK 168          
BLAST of DY259937 vs. ExPASy Swiss-Prot
Match: PIMT2_ARCFU (Protein-L-isoaspartate O-methyltransferase 2 OS=Archaeoglobus fulgidus GN=pcm2 PE=3 SV=1)

HSP 1 Score: 93.2041 bits (230), Expect = 2.803e-18
Identity = 62/167 (37.13%), Postives = 85/167 (50.90%), Query Frame = 2
Query:  260 SKKVSEVMETIDRACFVPDG--TPPYVDSPMAIGYNATISAPHMHATCLQLLEENLKPGMHALDIGSGTGYLTACFALMVGPQGRAVGVEHLPELVASSIQNIEKSAAAPLLKKGSPSLHVGDGKKGGPNLPPMKQYIGRTAPPQNPPALIDPLKTRK----PNGDS 742
            S+KV E +  + R  FVP+      YVD+P+ IGY  TISAPHM A   +LL+  L+ G   L++G+G GY  A  A +VG  G+ + +E++PEL   +       A    L   +  + VGDG KG     P  +     A P  P  LI+ LK R     P GDS
Sbjct:   21 SRKVYEAIRKVPRHLFVPESYKNEAYVDTPLPIGYGQTISAPHMVAIMCELLD--LREGDKVLEVGTGCGYHAAVTAEIVGKSGKVISIEYIPELAERA------RAILKALGYDNVEVIVGDGSKGYEKEAPYDKIYVTAAAPDIPKPLIEQLKPRGRMVIPVGDS 179          
BLAST of DY259937 vs. ExPASy Swiss-Prot
Match: PIMT_IGNH4 (Protein-L-isoaspartate O-methyltransferase OS=Ignicoccus hospitalis (strain KIN4/I / DSM 18386 / JCM 14125) GN=pcm PE=3 SV=1)

HSP 1 Score: 92.8189 bits (229), Expect = 3.661e-18
Identity = 59/171 (34.50%), Postives = 90/171 (52.63%), Query Frame = 2
Query:  212 KNKAMVEHLQHYGVITSKKVSEVMETIDRACFVPDGTP--PYVDSPMAIGYNATISAPHMHATCLQLLEENLKPGMHALDIGSGTGYLTACFALMVGPQGRAVGVEHLPELVASSIQNIEKSAAAPLLKKGSPSLHVGDGKKGGPNLPPMKQYIGRTAPPQNPPALIDPLK 718
            K + ++ +L   G I  K+V+E M  + R  FVP+      Y D+P+ IG   TISAPHM A  ++  E  L+ G   L++G+G+GY  A  A +VGP+G    +E +PEL   + + ++       L   + ++ VGDG KG P   P  + I   A  + P AL+  LK
Sbjct:    4 KKRELIRNLIAEGYIKRKEVAEAMMKVPRELFVPEELRHMAYEDTPLPIGAGQTISAPHMVAYMVEAAE--LRRGDKVLEVGTGSGYHAAVMAELVGPEGHVYTIERIPELAERARERLK------ALGYNNVTVLVGDGSKGYPPAAPYDKIIVTAAAKRVPEALLKQLK 166          
BLAST of DY259937 vs. ExPASy Swiss-Prot
Match: PIMT_PYRHO (Protein-L-isoaspartate O-methyltransferase OS=Pyrococcus horikoshii GN=pcm PE=3 SV=2)

HSP 1 Score: 92.0485 bits (227), Expect = 6.244e-18
Identity = 64/173 (36.99%), Postives = 91/173 (52.60%), Query Frame = 2
Query:  212 KNKAMVEHLQHYGVITSKKVSEVMETIDRACFVPDGTPPY--VDSPMAIGYNATISAPHMHATCLQLLEENLKPGMHALDIGSGTGYLTACFALMVGPQGRAVGVEHLPELVASSIQNIEKSAAAPLLKKGSPSLHV--GDGKKGGPNLPPMKQYIGRTAPPQNPPALIDPLK 718
            K K  VE L+  G+I S+KV        R  FV D    Y  VD P+ I    TISAPHM A  L++ +  LKPGM+ L++G+G+G+  A  A +V  +G    +E +PELV  + +N+E++        G  ++HV  GDG KG P   P    I     P+ P  L++ LK
Sbjct:   10 KWKRTVEMLKAEGIIKSEKVERAFLKCPRYLFVEDRYKKYAHVDEPLPIPAGQTISAPHMVAIMLEIAD--LKPGMNVLEVGTGSGWNAALIAEIV--KGDVYSIERIPELVEFAKRNLERA--------GVKNVHVILGDGSKGFPPKSPYDAIIVTAGAPEIPKPLVEQLK 170          
BLAST of DY259937 vs. ExPASy Swiss-Prot
Match: PIMT_PYRAE (Protein-L-isoaspartate O-methyltransferase OS=Pyrobaculum aerophilum GN=pcm PE=3 SV=1)

HSP 1 Score: 88.9669 bits (219), Expect = 5.286e-17
Identity = 62/169 (36.69%), Postives = 89/169 (52.66%), Query Frame = 2
Query:  218 KAMVEHLQHYGVITSKKVSEVMETIDRACFV-PD-GTPPYVDSPMAIGYNATISAPHMHATCLQLLEENLKPGMHALDIGSGTGYLTACFALMVGPQGRAVGVEHLPELVASSIQNIEKSAAAPLLKKGSPSLHVGDGKKGGPNLPPMKQYIGRTAPPQNPPALIDPLK 718
            K +VE L+  G++ S++V   + T+ R  FV P+     Y D P+ +   ATISAPHM A   +L+E   +PGM  L++G+G+GY  A  A  +  +GR   +E + EL   + QN+E+     L   G   ++ GDGKKG     P    I   A    PPALI  LK
Sbjct:    3 KRLVEELERDGIVKSERVKRALLTVPREEFVLPEYRMMAYEDRPLPLFAGATISAPHMVAMMCELIEP--RPGMKILEVGTGSGYHAAVCAEAIEKKGRIYTIEIVKELAVFAAQNLER-----LGYWGVVEVYHGDGKKGLEKHAPFDAIIVTAAADVIPPALIRQLK 164          
BLAST of DY259937 vs. ExPASy Swiss-Prot
Match: PIMT_STAMF (Protein-L-isoaspartate O-methyltransferase OS=Staphylothermus marinus (strain ATCC 43588 / DSM 3639 / F1) GN=pcm PE=3 SV=1)

HSP 1 Score: 87.8113 bits (216), Expect = 1.178e-16
Identity = 58/177 (32.77%), Postives = 92/177 (51.98%), Query Frame = 2
Query:  209 NKNKAMVEHLQHYGVITSKKVSEVMETIDRACFVPDGTPPY--VDSPMAIGYNATISAPHMHATCLQLLEENLKPGMHALDIGSGTGYLTACFALMVGPQ-----GRAVGVEHLPELVASSIQNIEKSAAAPLLKKGSPSLHVGDGKKGGPNLPPMKQYIGRTAPPQNPPALIDPLK 718
            N+ + ++++L+  G+I S KV   + ++ R  FVP     Y  +D P+ IG+  TISA HM A   + L+   +PG   L+IG+G+GY  A  A +V  Q     G    VE +PEL   + +N+E++     +     ++ VGDG KG P   P  + I   A P+ P  L+  L+
Sbjct:    7 NERRRVIDYLRRIGIIRSDKVYRALLSVPREEFVPPQYREYAYIDEPLPIGFGQTISAIHMVAIMTEELDP--EPGNIVLEIGTGSGYQAAVLAEIVAKQDPNRRGHVYTVERIPELAEFAKKNLERTGYIEYV-----TVIVGDGTKGYPEKAPYDRIIVTAAAPEVPKPLLKQLR 176          
BLAST of DY259937 vs. ExPASy Swiss-Prot
Match: PIMT1_ARCFU (Protein-L-isoaspartate O-methyltransferase 1 OS=Archaeoglobus fulgidus GN=pcm1 PE=3 SV=1)

HSP 1 Score: 86.6557 bits (213), Expect = 2.623e-16
Identity = 57/155 (36.77%), Postives = 82/155 (52.90%), Query Frame = 2
Query:  260 SKKVSEVMETIDRACFVPDG--TPPYVDSPMAIGYNATISAPHMHATCLQLLEENLKPGMHALDIGSGTGYLTACFALMVGPQGRAVGVEHLPELVASSIQNIEKSAAAPLLKKGSPSLHVGDGKKGGPNLPPMKQYIGRTAPPQNPPALIDPLK 718
            S+KV   ++ + R  FVP+   T  YVD+P+ IGY  TISAPHM A   +LL+  L+ G   L+IG+G GY  A  A +VG +G  V VE +PEL   + +N+        L   +  + VGDG  G   + P  +     + P  P  L++ LK
Sbjct:   21 SEKVYNAIKKVPRHLFVPERYRTMAYVDTPLPIGYGQTISAPHMVAIMCELLD--LREGERVLEIGTGCGYHAAVTAEIVGKRGLVVSVERIPELAEIAKRNLS------ALGYENVVVIVGDGSLGYEPMAPYDKIYVTASAPDIPKPLLEQLK 167          
BLAST of DY259937 vs. ExPASy Swiss-Prot
Match: PIMT_THENV (Protein-L-isoaspartate O-methyltransferase OS=Thermoproteus neutrophilus (strain DSM 2338 / JCM 9278 / V24Sta) GN=pcm PE=3 SV=1)

HSP 1 Score: 85.5001 bits (210), Expect = 5.844e-16
Identity = 64/167 (38.32%), Postives = 86/167 (51.50%), Query Frame = 2
Query:  224 MVEHLQHYGVITSKKVSEVMETIDRACFV-PD-GTPPYVDSPMAIGYNATISAPHMHATCLQLLEENLKPGMHALDIGSGTGYLTACFALMVGPQGRAVGVEHLPELVASSIQNIEKSAAAPLLKKGSPSLHVGDGKKGGPNLPPMKQYIGRTAPPQNPPALIDPLK 718
            +VE L   GVI S+ V   M  + R  FV P+     Y D P+ +  +ATISAPHM A   +L+E   KPGM  L++G+G+GY  A  A  +  +GR   VE + EL   + QNIE+     L   G   ++ GDG+ G     P    I   A  Q PPAL+  LK
Sbjct:    5 LVEELVREGVIKSESVRRAMLAVPREEFVMPEYRMMAYEDRPLPLFADATISAPHMVAMMCELVEP--KPGMKILEVGAGSGYQAAVCAEAMERRGRVYTVEIVKELAIYAAQNIER-----LGYWGVVEVYHGDGRSGLERHAPFDAIIVTAAARQIPPALVRQLK 164          
BLAST of DY259937 vs. ExPASy Swiss-Prot
Match: PIMT_PYRFU (Protein-L-isoaspartate O-methyltransferase OS=Pyrococcus furiosus GN=pcm PE=1 SV=2)

HSP 1 Score: 85.5001 bits (210), Expect = 5.844e-16
Identity = 60/168 (35.71%), Postives = 88/168 (52.38%), Query Frame = 2
Query:  227 VEHLQHYGVITSKKVSEVMETIDRACFVPDGTPPY--VDSPMAIGYNATISAPHMHATCLQLLEENLKPGMHALDIGSGTGYLTACFALMVGPQGRAVGVEHLPELVASSIQNIEKSAAAPLLKKGSPSLHV--GDGKKGGPNLPPMKQYIGRTAPPQNPPALIDPLK 718
            VE L+  G+I SK+V        R  FV D    Y  +D P+ I    T+SAPHM A  L++   NLKPGM+ L++G+G+G+  A  + +V  +     +E +PELV  + +N+E++        G  ++HV  GDG KG P   P    I     P+ P  LI+ LK
Sbjct:   15 VEMLKAEGIIRSKEVERAFLKYPRYLFVEDKYKKYAHIDEPLPIPAGQTVSAPHMVAIMLEIA--NLKPGMNILEVGTGSGWNAALISEIV--KTDVYTIERIPELVEFAKRNLERA--------GVKNVHVILGDGSKGFPPKAPYDVIIVTAGAPKIPEPLIEQLK 170          
BLAST of DY259937 vs. ExPASy Swiss-Prot
Match: PIMT_THEON (Protein-L-isoaspartate O-methyltransferase OS=Thermococcus onnurineus (strain NA1) GN=pcm PE=3 SV=1)

HSP 1 Score: 83.9593 bits (206), Expect = 1.700e-15
Identity = 61/166 (36.75%), Postives = 89/166 (53.61%), Query Frame = 2
Query:  227 VEHLQHYGVITSKKVSEVMETIDRACFV-PDGTP-PYVDSPMAIGYNATISAPHMHATCLQLLEENLKPGMHALDIGSGTGYLTACFALMVGPQGRAVGVEHLPELVASSIQNIEKSAAAPLLKKGSPSLHVGDGKKGGPNLPPMKQYIGRTAPPQNPPALIDPLK 718
            VE L+  G+I S+KV +    + R  FV P+     +VD P+ I    TISAPHM A  L+L E  L+ GM+ LDIG+G+G+  A  A +V  +     VE +PELV  + +N+EK+  A  +      + +GDG KG P   P  + +     P  P  L++ LK
Sbjct:   14 VEKLKREGIIRSEKVRQAFLKVPRYLFVLPEHKKWAHVDEPLPIPGGQTISAPHMVAIMLELAE--LEEGMNVLDIGTGSGWNAALAAELV--KTDVYTVERIPELVEFARKNLEKAGYADRV-----HVIIGDGTKGFPPKAPYDRILVAAGAPNVPEPLVEQLK 170          
The following BLAST results are available for this feature:
BLAST of DY259937 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 53
Match NameE-valueIdentityDescription
PIMT_METJA7.376e-1937.43Protein-L-isoaspartate O-methyltransferase OS=Meth... [more]
PIMT2_ARCFU2.803e-1837.13Protein-L-isoaspartate O-methyltransferase 2 OS=Ar... [more]
PIMT_IGNH43.661e-1834.50Protein-L-isoaspartate O-methyltransferase OS=Igni... [more]
PIMT_PYRHO6.244e-1836.99Protein-L-isoaspartate O-methyltransferase OS=Pyro... [more]
PIMT_PYRAE5.286e-1736.69Protein-L-isoaspartate O-methyltransferase OS=Pyro... [more]
PIMT_STAMF1.178e-1632.77Protein-L-isoaspartate O-methyltransferase OS=Stap... [more]
PIMT1_ARCFU2.623e-1636.77Protein-L-isoaspartate O-methyltransferase 1 OS=Ar... [more]
PIMT_THENV5.844e-1638.32Protein-L-isoaspartate O-methyltransferase OS=Ther... [more]
PIMT_PYRFU5.844e-1635.71Protein-L-isoaspartate O-methyltransferase OS=Pyro... [more]
PIMT_THEON1.700e-1536.75Protein-L-isoaspartate O-methyltransferase OS=Ther... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAP10YL04FM1 Fruit-TF Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY259937 ID=DY259937; Name=DY259937; organism=Citrus clementina; type=EST; length=1073bp
TTATTATATGCCTGGTTTAAAGCACATATTATCAACCTTCACTCTTATCC
CTCACCGTCATCGCTGTTCTTACTTACCATCACCGTCACCGTCACTTGTC
TCTTTGTCTTCTTCTTTTCATCTTCCAAATCCAGATAACCTCAGTCGTTT
CCTCACGGGTAACTGTCCCTTTTTCAAGATGGAGCGATACTGGAGTGGAA
GTGGTGTCAACAAGAATAAAGCGATGGTGGAGCATTTGCAGCATTATGGA
GTGATTACATCAAAAAAGGTATCTGAAGTAATGGAAACTATTGATCGGGC
TTGCTTTGTGCCAGATGGTACTCCACCTTATGTTGACAGCCCAATGGCAA
TAGGTTACAATGCCACTATTTCAGCACCTCATATGCATGCAACATGCCTT
CAATTATTGGAGGAGAATCTGAAACCTGGCATGCACGCTTTGGATATTGG
TTCTGGAACTGGATATTTGACAGCATGCTTTGCCTTGATGGTTGGACCAC
AAGGTCGTGCTGTGGGTGTCGAGCACCTTCCTGAGTTGGTGGCTTCCTCA
ATCCAGAATATTGAAAAAAGTGCAGCGGCTCCTTTGCTGAAAAAAGGTTC
TCCCTCATTGCATGTTGGTGATGGAAAAAAAGGTGGGCCCAATTTGCCCC
CCATGAAGCAATACATTGGCCGAACCGCACCCCCCCAAAATCCCCCGGCC
CTTATTGACCCCCTTAAAACCCGGAAGCCAAATGGTGACTCCCCGTTGGC
AAAATACTCCCCGGAATCGAATGGGGTTAACAAAAACCCCAAAGGGCCCC
CCTAACCCTCGGGAGGAAACCCCCCGTCCTTTACCTCCCCCCCTACCCAC
TCCGGGAGCACCCTCTGGGGGGCGCGGGGGAGGGCTATAATTCCCTTTCC
CCCCTAAACAAGGTGCGCGACCCCTTTAGCCATCAAACACAACGCTTGCC
AATGGGGCAAACAAAAACCACCCCACCCATCCACCCTACACATGGGGGCG
GTTTATTCTTCCCCCTCATATAATTTCCCGATCGGAGTCGGGTGTCGCAC
ACCCCCCCACCCCTCCCCCCCCC
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