DY259937

Overview
NameDY259937
Unique NameDY259937
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length1073
Libraries
Library NameType
Fruit-TFcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY259937 vs. ExPASy Swiss-Prot
Match: PIMT_METTH (Protein-L-isoaspartate O-methyltransferase OS=Methanobacterium thermoautotrophicum GN=pcm PE=3 SV=1)

HSP 1 Score: 83.9593 bits (206), Expect = 1.700e-15
Identity = 59/175 (33.71%), Postives = 87/175 (49.71%), Query Frame = 2
Query:  206 VNKNKAMVEHLQHYGVITSKKVSEVMETIDRACFVPDGTP--PYVDSPMAIGYNATISAPHMHATCLQLLEENLKPGMHALDIGSGTGYLTACFALMVGPQGRAVGVEHLPELVASSIQNIEKSAAAPLLKKGSPSLHV--GDGKKGGPNLPPMKQYIGRTAPPQNPPALIDPLK 718
            +++ + MV+ L   G I S+ V   ME + R  FVP+      Y+D P+ IG   TISAPHM A   ++L+  L+PGM  L+IG+G GY  A  A ++GP+G    VE +  L         + A   L   G  ++ V  GDG +G  +  P  +     A P  P  L+  L+
Sbjct:    2 MDERRRMVQDLMERGYIKSEAVRRAMERVPREEFVPEDEMHRAYMDMPLPIGEGQTISAPHMVAMIAEILD--LEPGMKVLEIGTGCGYNAAVIAEIIGPEGHLYTVERIGILY--------ERARKKLRSLGYDNITVIHGDGSQGFADEAPYSRIYVTAAAPYIPDPLMKQLE 166          
BLAST of DY259937 vs. ExPASy Swiss-Prot
Match: PIMT_PYRAB (Protein-L-isoaspartate O-methyltransferase OS=Pyrococcus abyssi GN=pcm PE=3 SV=1)

HSP 1 Score: 83.5741 bits (205), Expect = 2.221e-15
Identity = 58/171 (33.92%), Postives = 88/171 (51.46%), Query Frame = 2
Query:  218 KAMVEHLQHYGVITSKKVSEVMETIDRACFVPDGTPPY--VDSPMAIGYNATISAPHMHATCLQLLEENLKPGMHALDIGSGTGYLTACFALMVGPQGRAVGVEHLPELVASSIQNIEKSAAAPLLKKGSPSLHV--GDGKKGGPNLPPMKQYIGRTAPPQNPPALIDPLK 718
            K  VE L+  G+I S +V E      R  FV D    Y  +D P+ I    T+SAPHM A  L++ +  LK GM+ L++G+G+G+  A  + +V  +     +E +PELV  + +N+E++        G  ++HV  GDG KG P   P    I     P+ P  L++ LK
Sbjct:   11 KRTVEMLEREGIIRSLEVKEAFLKYPRYMFVEDRYKSYAHIDEPLPIPAGQTVSAPHMVAIMLEIAK--LKEGMNVLEVGTGSGWNAALISYIV--KTDVYSIERIPELVEFAKRNLERA--------GVKNVHVILGDGSKGFPPKAPYDVIIVTAGAPKVPEPLVEQLK 169          
BLAST of DY259937 vs. ExPASy Swiss-Prot
Match: PIMT_METBU (Protein-L-isoaspartate O-methyltransferase OS=Methanococcoides burtonii (strain DSM 6242) GN=pcm PE=3 SV=1)

HSP 1 Score: 83.5741 bits (205), Expect = 2.221e-15
Identity = 53/155 (34.19%), Postives = 81/155 (52.26%), Query Frame = 2
Query:  257 TSKKVSEVMETIDRACFVPDGTPP--YVDSPMAIGYNATISAPHMHATCLQLLEENLKPGMHALDIGSGTGYLTACFALMVGPQGRAVGVEHLPELVASSIQNIEKSAAAPLLKKGSPSLHVGDGKKGGPNLPPMKQYIGRTAPPQNPPALIDPL 715
            T ++V   M+ + R  F+P+      Y D+P+ IGY+ TISAPHM A    LL+  +  GM  L+IGSG+GY  A  A + G  G+   VE +PELV  +  N+E++  +      + ++   DG  G P   P  +    +  P+ PP L + L
Sbjct:   10 TDQRVLNAMKKVPRHLFLPEDMQSFAYADTPLPIGYDQTISAPHMVAIMCDLLK--ITEGMTILEIGSGSGYNAAVMAELAGENGKVYTVERIPELVDLARNNLERAGYS------NVTVVHDDGSCGLPEHAPYDRIAVTSVAPEVPPPLREQL 156          
BLAST of DY259937 vs. ExPASy Swiss-Prot
Match: PIMT_META3 (Protein-L-isoaspartate O-methyltransferase OS=Methanococcus aeolicus (strain Nankai-3 / ATCC BAA-1280) GN=pcm PE=3 SV=1)

HSP 1 Score: 83.1889 bits (204), Expect = 2.901e-15
Identity = 59/175 (33.71%), Postives = 91/175 (52.00%), Query Frame = 2
Query:  206 VNKNKAMVEHLQHYGVITSKKVSEVMETIDRACFVPDGTPPY--VDSPMAIGYNATISAPHMHATCLQLLEENLKPGMHALDIGSGTGYLTACFALMVGPQGRAVGVEHLPELVASSIQNIEKSAAAPLLKKGSPSLHV--GDGKKGGPNLPPMKQYIGRTAPPQNPPALIDPLK 718
            + K +A+V+ L + G + +K VS+ + T+ R  F+P     Y  VD+P+ IG+  TISA HM A     L+  LK G   L+IG+G+GY  A  A +VG  G+ + +E +PEL         + A + L K G  ++ V  G+G  G     P  +     + P  P +LI+ LK
Sbjct:    3 IKKMEAIVKGLINAGYLKNKMVSKALLTVPRHEFIPAELHDYAYVDTPLNIGHGQTISAIHMVAIICDALD--LKEGDKVLEIGTGSGYHAAVVAEIVGKNGQVITIERIPELA--------EKAESTLKKLGYTNVKVICGNGTLGSSEFAPYDKIYLTASGPDIPNSLIEQLK 167          
BLAST of DY259937 vs. ExPASy Swiss-Prot
Match: PIMT_PYRIL (Protein-L-isoaspartate O-methyltransferase OS=Pyrobaculum islandicum (strain DSM 4184 / JCM 9189) GN=pcm PE=3 SV=1)

HSP 1 Score: 82.8037 bits (203), Expect = 3.788e-15
Identity = 59/167 (35.33%), Postives = 88/167 (52.69%), Query Frame = 2
Query:  224 MVEHLQHYGVITSKKVSEVMETIDRACFV-PD-GTPPYVDSPMAIGYNATISAPHMHATCLQLLEENLKPGMHALDIGSGTGYLTACFALMVGPQGRAVGVEHLPELVASSIQNIEKSAAAPLLKKGSPSLHVGDGKKGGPNLPPMKQYIGRTAPPQNPPALIDPLK 718
            +VE L + G+I +++V + M  + R  FV P+     Y D P+ + ++ATISAPHM A   +L+E   +PGM  L++G+G+GY  A  A  +  +G+   +E + EL   + QNIE+     L   G   ++ GDGKKG     P    I   A    P  LI  LK
Sbjct:    5 LVEELTNEGIIKTERVKKAMLAVPREEFVMPEYRMMAYEDRPLPLFFDATISAPHMVAMMCELVEP--RPGMKILEVGTGSGYQAAVCAEAIERKGKVYTIEIVKELAIYAAQNIER-----LGYWGIVEVYHGDGKKGLERHAPFDAIIVTAAARTIPSELIKQLK 164          
BLAST of DY259937 vs. ExPASy Swiss-Prot
Match: PIMT_THESM (Protein-L-isoaspartate O-methyltransferase OS=Thermococcus sibiricus (strain MM 739 / DSM 12597) GN=pcm PE=3 SV=1)

HSP 1 Score: 79.7221 bits (195), Expect = 3.207e-14
Identity = 58/169 (34.32%), Postives = 87/169 (51.48%), Query Frame = 2
Query:  224 MVEHLQHYGVITSKKVSEVMETIDRACFVPDGTPPY--VDSPMAIGYNATISAPHMHATCLQLLEENLKPGMHALDIGSGTGYLTACFALMVGPQGRAVGVEHLPELVASSIQNIEKSAAAPLLKKGSPSLHV--GDGKKGGPNLPPMKQYIGRTAPPQNPPALIDPLK 718
            +VE+L+  G+I S+KV      + R  FV D    Y  VD P+ I    TISAPHM A  L+L E  L+ GM+ L++G+G+G+  A    +V  +     +E + +LV  + +N+E++            +HV  GDG KG P   P  + I     P+ P  LI+ LK
Sbjct:   13 LVENLEREGIIKSEKVKRAFLRVPRYKFVSDRYKEYAHVDEPLPIPAGQTISAPHMVAIMLELAE--LEGGMNVLEVGAGSGWNAALIYELV--KREVYTIERVSDLVEFARKNLERAGY-------KDKVHVIWGDGSKGYPPNAPYDRIIVTAGAPKVPEPLIEQLK 170          
BLAST of DY259937 vs. ExPASy Swiss-Prot
Match: PIMT_PYRCJ (Protein-L-isoaspartate O-methyltransferase OS=Pyrobaculum calidifontis (strain JCM 11548 / VA1) GN=pcm PE=3 SV=1)

HSP 1 Score: 79.7221 bits (195), Expect = 3.207e-14
Identity = 58/170 (34.12%), Postives = 86/170 (50.59%), Query Frame = 2
Query:  224 MVEHLQHYGVITSKKVSEVMETIDRACFVPDGTPPY-----VDSPMAIGYNATISAPHMHATCLQLLEENLKPGMHALDIGSGTGYLTACFALMVGPQGRAVGVEHLPELVASSIQNIEKSAAAPLLKKGSPSLHVGDGKKGGPNLPPMKQYIGRTAPPQNPPALIDPLK 718
            +V  L   GVI S++V   M  + R  FV   TP Y      D P+ +   ATISAPHM A   +L+E   +PGM  L++G+G+GY  A  A  +  QG+   VE + EL   + QN+E+     L   G   ++ GDG++G     P    +   A  + P AL++ L+
Sbjct:    5 LVAELVKEGVIKSERVKNAMLKVPREEFV---TPEYRMMAYEDRPLPLFAGATISAPHMVAMMCELIEP--RPGMKILEVGTGSGYHAAVCAEAIERQGKVYTVEIVRELAIFAAQNLER-----LGYLGVVEVYRGDGRRGLERHAPFDAVLVTAAASEIPKALVEQLR 164          
BLAST of DY259937 vs. ExPASy Swiss-Prot
Match: PIMT_THEM4 (Protein-L-isoaspartate O-methyltransferase OS=Thermosipho melanesiensis (strain BI429 / DSM 12029) GN=pcm PE=3 SV=1)

HSP 1 Score: 79.337 bits (194), Expect = 4.188e-14
Identity = 51/150 (34.00%), Postives = 76/150 (50.67%), Query Frame = 2
Query:  224 MVEHLQHYGVITSKKVSEVMETIDRACFVPDGTPP--YVDSPMAIGYNATISAPHMHATCLQLLEENLKPGMHALDIGSGTGYLTACFALMVGPQGRAVGVEHLPELVASSIQNIEKSAAAPLLKKGSPSLHVGDGKKGGPNLPPMKQYI 667
            M EHL+ YGV  SK + E M  IDR  FVP+      Y D P+ IG+  TISAPHM    +   E +LK     L+IG+G+GY  A  +L+VG  G    +E + +L   + +  ++     +      +  +GDGK+G     P  + +
Sbjct:    1 MYEHLKRYGV--SKNIIEAMNKIDRKYFVPENVKDLAYDDIPLPIGFGQTISAPHMVG--IMCKELDLKEKDKVLEIGTGSGYNAAVMSLLVGKSGHIYTIERIKQLYKIATKRFKQFGLTNI------TCILGDGKEGFEEYAPFDKIV 140          
BLAST of DY259937 vs. ExPASy Swiss-Prot
Match: PIMT_KORCO (Protein-L-isoaspartate O-methyltransferase OS=Korarchaeum cryptofilum (strain OPF8) GN=pcm PE=3 SV=1)

HSP 1 Score: 79.337 bits (194), Expect = 4.188e-14
Identity = 58/175 (33.14%), Postives = 86/175 (49.14%), Query Frame = 2
Query:  224 MVEHLQHYGVITSKKVSEVMETIDRACFVPDGTPP--YVDSPMAIGYNATISAPHMHATCLQLLEENLKPGMHALDIGSGTGYLTACFALMVGPQ-------GRAVGVEHLPELVASSIQNIEKSAAAPLLKKGSPSLHV--GDGKKGGPNLPPMKQYIGRTAPPQNPPALIDPL 715
            ++E L   G+I ++KV    E + R  FVP+      Y D P+ IG + TISAPHM     ++L+  L+ G   L++GSG+GY  A  A +V P        G  + VE  P L + + +N+ K+         S  +HV   DG  G P    + + +   A PQ PP LI+ L
Sbjct:    6 LIESLVRRGIIKTEKVRRAAERVKRELFVPERYKEVAYEDIPLPIGDDQTISAPHMVFIMNEVLD--LEEGQLVLEVGSGSGYHAATIAEIVAPSDSPPSRWGAVITVEINPRLASLAFENLSKAGY-------SSRVHVVNADGSSGLPLRRKVDRIVVTAAAPQIPPPLIEML 171          
BLAST of DY259937 vs. ExPASy Swiss-Prot
Match: PIMT2_METAC (Protein-L-isoaspartate O-methyltransferase 2 OS=Methanosarcina acetivorans GN=pcm2 PE=3 SV=1)

HSP 1 Score: 78.9518 bits (193), Expect = 5.470e-14
Identity = 61/187 (32.62%), Postives = 91/187 (48.66%), Query Frame = 2
Query:  218 KAMVEHLQHYGVITSKKVSEVMETIDRACFVPD--GTPPYVDSPMAIGYNATISAPHMHATCLQLLEENLKPGMHALDIGSGTGYLTACFALMVGPQGRAVGVEHLPELVASSIQNIEKSAAAPLLKKGSPSLHVGDGKKGGPNLPPMKQYIGRTAPPQNPPALIDPLKTRKPNGDS--PLAKYSPE 766
            K +VE L+   ++  KKV + M  + R  FVP+      Y D P+ IG+  TIS PH  A   ++LE  L  G   L+IG+G+GY  A  A +VG  G    VE +  LV  + +N+E+      +   + ++ + +G  G P   P  +     A P  P AL++ L   KP G    P+  YS E
Sbjct:   31 KLLVEGLED--IVRDKKVLKAMFRVPRHRFVPEYEQRAAYTDRPLEIGHGQTISTPHTVALMCEILE--LSEGHKVLEIGTGSGYNAAVMAELVGKTGHIYSVERIEPLVNFARKNLEQ------MGYDNVTVLLENGSMGYPRYAPYDRIAVTCAAPTIPKALLEQL---KPGGIMVIPVGDYSQE 204          
The following BLAST results are available for this feature:
BLAST of DY259937 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 53
Match NameE-valueIdentityDescription
PIMT_METTH1.700e-1533.71Protein-L-isoaspartate O-methyltransferase OS=Meth... [more]
PIMT_PYRAB2.221e-1533.92Protein-L-isoaspartate O-methyltransferase OS=Pyro... [more]
PIMT_METBU2.221e-1534.19Protein-L-isoaspartate O-methyltransferase OS=Meth... [more]
PIMT_META32.901e-1533.71Protein-L-isoaspartate O-methyltransferase OS=Meth... [more]
PIMT_PYRIL3.788e-1535.33Protein-L-isoaspartate O-methyltransferase OS=Pyro... [more]
PIMT_THESM3.207e-1434.32Protein-L-isoaspartate O-methyltransferase OS=Ther... [more]
PIMT_PYRCJ3.207e-1434.12Protein-L-isoaspartate O-methyltransferase OS=Pyro... [more]
PIMT_THEM44.188e-1434.00Protein-L-isoaspartate O-methyltransferase OS=Ther... [more]
PIMT_KORCO4.188e-1433.14Protein-L-isoaspartate O-methyltransferase OS=Kora... [more]
PIMT2_METAC5.470e-1432.62Protein-L-isoaspartate O-methyltransferase 2 OS=Me... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAP10YL04FM1 Fruit-TF Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY259937 ID=DY259937; Name=DY259937; organism=Citrus clementina; type=EST; length=1073bp
TTATTATATGCCTGGTTTAAAGCACATATTATCAACCTTCACTCTTATCC
CTCACCGTCATCGCTGTTCTTACTTACCATCACCGTCACCGTCACTTGTC
TCTTTGTCTTCTTCTTTTCATCTTCCAAATCCAGATAACCTCAGTCGTTT
CCTCACGGGTAACTGTCCCTTTTTCAAGATGGAGCGATACTGGAGTGGAA
GTGGTGTCAACAAGAATAAAGCGATGGTGGAGCATTTGCAGCATTATGGA
GTGATTACATCAAAAAAGGTATCTGAAGTAATGGAAACTATTGATCGGGC
TTGCTTTGTGCCAGATGGTACTCCACCTTATGTTGACAGCCCAATGGCAA
TAGGTTACAATGCCACTATTTCAGCACCTCATATGCATGCAACATGCCTT
CAATTATTGGAGGAGAATCTGAAACCTGGCATGCACGCTTTGGATATTGG
TTCTGGAACTGGATATTTGACAGCATGCTTTGCCTTGATGGTTGGACCAC
AAGGTCGTGCTGTGGGTGTCGAGCACCTTCCTGAGTTGGTGGCTTCCTCA
ATCCAGAATATTGAAAAAAGTGCAGCGGCTCCTTTGCTGAAAAAAGGTTC
TCCCTCATTGCATGTTGGTGATGGAAAAAAAGGTGGGCCCAATTTGCCCC
CCATGAAGCAATACATTGGCCGAACCGCACCCCCCCAAAATCCCCCGGCC
CTTATTGACCCCCTTAAAACCCGGAAGCCAAATGGTGACTCCCCGTTGGC
AAAATACTCCCCGGAATCGAATGGGGTTAACAAAAACCCCAAAGGGCCCC
CCTAACCCTCGGGAGGAAACCCCCCGTCCTTTACCTCCCCCCCTACCCAC
TCCGGGAGCACCCTCTGGGGGGCGCGGGGGAGGGCTATAATTCCCTTTCC
CCCCTAAACAAGGTGCGCGACCCCTTTAGCCATCAAACACAACGCTTGCC
AATGGGGCAAACAAAAACCACCCCACCCATCCACCCTACACATGGGGGCG
GTTTATTCTTCCCCCTCATATAATTTCCCGATCGGAGTCGGGTGTCGCAC
ACCCCCCCACCCCTCCCCCCCCC
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