DY259937

Overview
NameDY259937
Unique NameDY259937
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length1073
Libraries
Library NameType
Fruit-TFcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY259937 vs. ExPASy Swiss-Prot
Match: PIMT1_METAC (Protein-L-isoaspartate O-methyltransferase 1 OS=Methanosarcina acetivorans GN=pcm1 PE=3 SV=1)

HSP 1 Score: 78.9518 bits (193), Expect = 5.470e-14
Identity = 51/154 (33.12%), Postives = 78/154 (50.65%), Query Frame = 2
Query:  263 KKVSEVMETIDRACFVPDGTPP--YVDSPMAIGYNATISAPHMHATCLQLLEENLKPGMHALDIGSGTGYLTACFALMVGPQGRAVGVEHLPELVASSIQNIEKSAAAPLLKKGSPSLHVGDGKKGGPNLPPMKQYIGRTAPPQNPPALIDPLK 718
            +KV + M  + R  FVP+      Y+D+P+ IG+  TISAPHM A    LLE  L  G+  L+IG+G+GY  A    +VG  G    VE +  LV  + +N++K+         + ++ + DG  G     P  + +   A P  P  L++ LK
Sbjct:   60 EKVLKAMLRVPRHLFVPEYAKKGAYIDTPLEIGFGQTISAPHMVAIMCDLLE--LSEGLKVLEIGAGSGYNAAVMGELVGKSGHVYTVERIEPLVDFARENLKKAGYE------NVTVLLDDGSMGYSKCAPYDRIVVTCAAPDIPEPLLEQLK 205          
BLAST of DY259937 vs. ExPASy Swiss-Prot
Match: PIMT_METMA (Protein-L-isoaspartate O-methyltransferase OS=Methanosarcina mazei GN=pcm PE=3 SV=1)

HSP 1 Score: 78.1814 bits (191), Expect = 9.331e-14
Identity = 60/187 (32.09%), Postives = 92/187 (49.20%), Query Frame = 2
Query:  218 KAMVEHLQHYGVITSKKVSEVMETIDRACFVPD--GTPPYVDSPMAIGYNATISAPHMHATCLQLLEENLKPGMHALDIGSGTGYLTACFALMVGPQGRAVGVEHLPELVASSIQNIEKSAAAPLLKKGSPSLHVGDGKKGGPNLPPMKQYIGRTAPPQNPPALIDPLKTRKPNGDS--PLAKYSPE 766
            K +VE L+  G +  +KV + M  + R  FVP+      YVD P+ IG+  TISAPHM A   ++LE  L  G   L+IG+G+GY  A  + +VG  G    VE +  L   + +N++++         + ++ + +G  G P   P  +     A P  P  L++ L   KP G    P+  YS E
Sbjct:   36 KLLVEGLE--GFVIDEKVLQAMLRVPRHRFVPEYEQRAAYVDMPLEIGHGQTISAPHMVAMMCEILE--LAEGHKVLEIGAGSGYNAAVMSELVGKTGHIYTVERVEPLANFAKKNLKEAGYK------NVTVLLENGSMGYPGYAPYDRIAVTCAAPNIPETLLEQL---KPGGIMVIPVGSYSQE 209          
BLAST of DY259937 vs. ExPASy Swiss-Prot
Match: PIMT_PYRAR (Protein-L-isoaspartate O-methyltransferase OS=Pyrobaculum arsenaticum (strain DSM 13514 / JCM 11321) GN=pcm PE=3 SV=1)

HSP 1 Score: 77.7962 bits (190), Expect = 1.219e-13
Identity = 56/169 (33.14%), Postives = 88/169 (52.07%), Query Frame = 2
Query:  218 KAMVEHLQHYGVITSKKVSEVMETIDRACFV-PD-GTPPYVDSPMAIGYNATISAPHMHATCLQLLEENLKPGMHALDIGSGTGYLTACFALMVGPQGRAVGVEHLPELVASSIQNIEKSAAAPLLKKGSPSLHVGDGKKGGPNLPPMKQYIGRTAPPQNPPALIDPLK 718
            K +V+ L+  GV+ S++V + + ++ R  FV P+     Y D P+ +  +ATISAPHM A   +L+E   +PGM  L++G+G+GY  A  A  +  +G+   VE +  L   + QN+E+     L   G   +   DGK+G     P    I   A    P AL++ LK
Sbjct:    3 KKLVDDLEREGVLKSERVKKALLSVPREEFVMPEYRMMAYEDRPLPLFADATISAPHMVAMMCELIEP--RPGMSILEVGTGSGYHAAVCAEAIERRGKVYTVEIVKGLAIYAAQNLER-----LGYWGVVEVFHSDGKRGLEKFAPYDAIIVTAAAASIPSALVNQLK 164          
BLAST of DY259937 vs. ExPASy Swiss-Prot
Match: PIMT_UNCMA (Protein-L-isoaspartate O-methyltransferase OS=Uncultured methanogenic archaeon RC-I GN=pcm PE=3 SV=1)

HSP 1 Score: 77.0258 bits (188), Expect = 2.079e-13
Identity = 53/150 (35.33%), Postives = 75/150 (50.00%), Query Frame = 2
Query:  281 METIDRACFVPDGTPP--YVDSPMAIGYNATISAPHMHATCLQLLEENLKPGMHALDIGSGTGYLTACFALMVGPQGRAVGVEHLPELVASSIQNIEKSAAAPLLKKGSPSLHV--GDGKKGGPNLPPMKQYIGRTAPPQNPPALIDPLK 718
            M+ + R  FVP+   P  Y D+P+ IG+N TISAP M A   Q L+  ++ G   L+IG+G GY  A  A++ G  G    VE +PEL           A + L + G  ++ V   DG +G P+  P  +     A P  P  L+D LK
Sbjct:    1 MDRVPREEFVPEDVRPDAYYDTPLPIGHNQTISAPSMVAIMCQALD--IREGNKVLEIGTGLGYHAAVMAVLAGASGVVYTVERIPELA--------DMARSVLSRLGFDNVKVFLRDGTEGLPDFAPYDRISVAAAAPDVPQPLVDQLK 140          
BLAST of DY259937 vs. ExPASy Swiss-Prot
Match: PIMT_METM7 (Protein-L-isoaspartate O-methyltransferase OS=Methanococcus maripaludis (strain C7 / ATCC BAA-1331) GN=pcm PE=3 SV=1)

HSP 1 Score: 77.0258 bits (188), Expect = 2.079e-13
Identity = 55/174 (31.61%), Postives = 84/174 (48.28%), Query Frame = 2
Query:  206 VNKNKAMVEHLQHYGVITSKKVSEVMETIDRACFVPDGTPPY--VDSPMAIGYNATISAPHMHATCLQLLEENLKPGMHALDIGSGTGYLTACFALMVGPQGRAVGVEHLPELVASSIQNIEKSAAAPLLKKGSPSLHV--GDGKKGGPNLPPMKQYIGRTAPPQNPPALIDPL 715
            +N+   ++ +L   G I  + V + + T+ R  F+P     Y  +DSP+ IGY  TISA HM     + L+  L  G + L++G+G+GY  A  + +VG  G    +E +PEL   S Q         LL+ G  ++ V  GDG KG     P  +     + P  P AL + L
Sbjct:    3 LNEIVGVIGNLISNGYIKKQSVIDALMTVPRHKFIPKSMEEYAYIDSPLGIGYGQTISAIHMVGIMCEELD--LDVGQNVLEVGTGSGYHAAVVSEIVGESGNVTTIERIPELFEKSKQ--------VLLELGYENVEVVLGDGTKGYLENSPYDRIYVTASGPDVPKALFEQL 166          
BLAST of DY259937 vs. ExPASy Swiss-Prot
Match: PIMT_METMP (Protein-L-isoaspartate O-methyltransferase OS=Methanococcus maripaludis GN=pcm PE=3 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 2.298e-12
Identity = 51/172 (29.65%), Postives = 84/172 (48.84%), Query Frame = 2
Query:  206 VNKNKAMVEHLQHYGVITSKKVSEVMETIDRACFVPDGTPPY--VDSPMAIGYNATISAPHMHATCLQLLEENLKPGMHALDIGSGTGYLTACFALMVGPQGRAVGVEHLPELVASSIQNIEKSAAAPLLKKGSPSLHVGDGKKGGPNLPPMKQYIGRTAPPQNPPALIDPL 715
            +N+   ++E+L   G I  + V + + ++ R  F+      Y  VDSP+ IGY  TISA HM     + L+  L  G + L++G+G+GY  A  + +VG  G+   +E +PEL  +S + + +      L   +  + +GDG KG     P  +     + P  P AL   L
Sbjct:    3 LNEIIPVIENLISRGYIKKQSVIDAILSVPRHKFISKSMESYAYVDSPLEIGYGQTISAIHMVGIMCEELD--LDEGQNVLEVGTGSGYHAAVVSKIVGESGKVTTIERIPELFENSKKTLSE------LGYNNVEVVLGDGTKGYLENAPYDRIYVTASGPDVPKALFKQL 166          
BLAST of DY259937 vs. ExPASy Swiss-Prot
Match: PIMT_ANAD2 (Protein-L-isoaspartate O-methyltransferase OS=Anaeromyxobacter dehalogenans (strain 2CP-1 / ATCC BAA-258) GN=pcm PE=3 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 6.687e-12
Identity = 54/160 (33.75%), Postives = 81/160 (50.62%), Query Frame = 2
Query:  236 LQHYGVITSKKVSEVMETIDRACFVPD--GTPPYVDSPMAIGYNATISAPHMHATCLQLLEENLKPGMHALDIGSGTGYLTACFALMVGPQGRAVGVEHLPELVASSIQNIEKSAAAPLLKKGSPSLHV--GDGKKGGPNLPPMKQYIGRTAPPQNPPAL 703
            L H G I  ++V + +  +DRA FV        Y D P+ IG+  TIS P++ A   + LE  L+ G   L++G+G+GY TA  A + G       VE +P L A       ++ A  L + G  ++H+  GDG  G P   P ++ +   A P+ PPAL
Sbjct:    9 LGHMG-IRDRRVLDAIAALDRARFVSRDLSAEAYADRPLPIGFGQTISQPYVVAFMTEALE--LEGGERVLEVGTGSGYQTALLARLAG---EVWSVEIVPGLAA-------RARALLLEELGLANVHLREGDGALGWPEAAPFERILVTAAAPRVPPAL 155          
BLAST of DY259937 vs. ExPASy Swiss-Prot
Match: PIMT_ANADE (Protein-L-isoaspartate O-methyltransferase OS=Anaeromyxobacter dehalogenans (strain 2CP-C) GN=pcm PE=3 SV=1)

HSP 1 Score: 70.8626 bits (172), Expect = 1.490e-11
Identity = 55/167 (32.93%), Postives = 80/167 (47.90%), Query Frame = 2
Query:  215 NKAMVEHLQHYGVITSKKVSEVMETIDRACFVPDG--TPPYVDSPMAIGYNATISAPHMHATCLQLLEENLKPGMHALDIGSGTGYLTACFALMVGPQGRAVGVEHLPELVASSIQNIEKSAAAPLLKKGSPSLHV--GDGKKGGPNLPPMKQYIGRTAPPQNPPAL 703
            ++ + E L H G I  ++V + +  +DRA FVP       Y D P+ IG+  TIS P + A   + L   L  G   L++G+G+GY TA  A + G       VE +P L A       ++ A  L   G  ++H+  GDG  G P   P  + +   A PQ PP L
Sbjct:    2 SRELAEWLGHMG-IRDRRVLDAIAELDRARFVPPHLVAEAYADRPLPIGFGQTISQPFVVAFMTEAL--GLDGGERVLEVGTGSGYQTALLARLAG---EVWSVEIVPGLAA-------RARALLLGDLGLANVHLREGDGALGWPEAAPFDRILVTAAAPQVPPPL 155          
BLAST of DY259937 vs. ExPASy Swiss-Prot
Match: PIMT_METM6 (Protein-L-isoaspartate O-methyltransferase OS=Methanococcus maripaludis (strain C6 / ATCC BAA-1332) GN=pcm PE=3 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 1.946e-11
Identity = 51/172 (29.65%), Postives = 82/172 (47.67%), Query Frame = 2
Query:  206 VNKNKAMVEHLQHYGVITSKKVSEVMETIDRACFVPDGTPPY--VDSPMAIGYNATISAPHMHATCLQLLEENLKPGMHALDIGSGTGYLTACFALMVGPQGRAVGVEHLPELVASSIQNIEKSAAAPLLKKGSPSLHVGDGKKGGPNLPPMKQYIGRTAPPQNPPALIDPL 715
            +N+   +V +L   G I  + V + + ++ R  F+P     Y  +DSP+ IG   TISA HM     + L+ N+  G + L++G+G+GY  A  + +VG  G+   VE +PEL   S Q + +      L   +    +GDG  G     P  +     + P  P AL + L
Sbjct:    3 LNEIVGVVGNLISKGYIKKQSVIDALMSVPRHKFLPKNMEEYAYIDSPLGIGCGQTISAIHMVGIMCEELDLNM--GQNVLEVGTGSGYQAAVVSKIVGESGKVTTVERIPELFEKSKQVLSE------LGYENVEAVLGDGTLGYLENSPYDRIYVTASGPNVPKALFEQL 166          
BLAST of DY259937 vs. ExPASy Swiss-Prot
Match: PIMT_METM5 (Protein-L-isoaspartate O-methyltransferase OS=Methanococcus maripaludis (strain C5 / ATCC BAA-1333) GN=pcm PE=3 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 1.946e-11
Identity = 50/172 (29.07%), Postives = 83/172 (48.26%), Query Frame = 2
Query:  206 VNKNKAMVEHLQHYGVITSKKVSEVMETIDRACFVPDGTPPY--VDSPMAIGYNATISAPHMHATCLQLLEENLKPGMHALDIGSGTGYLTACFALMVGPQGRAVGVEHLPELVASSIQNIEKSAAAPLLKKGSPSLHVGDGKKGGPNLPPMKQYIGRTAPPQNPPALIDPL 715
            +N+   ++ +L   G I  + V + + ++ R  F+P     Y  +DSP+ IG   TISA HM     + L+  L  G + L++G+G+GY  A  + +VG  G+   +E +PEL   S Q + +      L   +  + +GDG KG     P  +     + P  P AL + L
Sbjct:    3 LNEIIGVIGNLISKGYIQKQSVIDALMSVPRHKFIPKAMEEYAYIDSPLGIGCGQTISAIHMVGIMCEELD--LDVGQNVLEVGTGSGYHAAVVSEIVGESGKVTTIERIPELFEKSKQVLSE------LGYENVEVVLGDGTKGYLENAPYDRIYVTASGPNVPIALFEQL 166          
The following BLAST results are available for this feature:
BLAST of DY259937 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 53
Match NameE-valueIdentityDescription
PIMT1_METAC5.470e-1433.12Protein-L-isoaspartate O-methyltransferase 1 OS=Me... [more]
PIMT_METMA9.331e-1432.09Protein-L-isoaspartate O-methyltransferase OS=Meth... [more]
PIMT_PYRAR1.219e-1333.14Protein-L-isoaspartate O-methyltransferase OS=Pyro... [more]
PIMT_UNCMA2.079e-1335.33Protein-L-isoaspartate O-methyltransferase OS=Uncu... [more]
PIMT_METM72.079e-1331.61Protein-L-isoaspartate O-methyltransferase OS=Meth... [more]
PIMT_METMP2.298e-1229.65Protein-L-isoaspartate O-methyltransferase OS=Meth... [more]
PIMT_ANAD26.687e-1233.75Protein-L-isoaspartate O-methyltransferase OS=Anae... [more]
PIMT_ANADE1.490e-1132.93Protein-L-isoaspartate O-methyltransferase OS=Anae... [more]
PIMT_METM61.946e-1129.65Protein-L-isoaspartate O-methyltransferase OS=Meth... [more]
PIMT_METM51.946e-1129.07Protein-L-isoaspartate O-methyltransferase OS=Meth... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAP10YL04FM1 Fruit-TF Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY259937 ID=DY259937; Name=DY259937; organism=Citrus clementina; type=EST; length=1073bp
TTATTATATGCCTGGTTTAAAGCACATATTATCAACCTTCACTCTTATCC
CTCACCGTCATCGCTGTTCTTACTTACCATCACCGTCACCGTCACTTGTC
TCTTTGTCTTCTTCTTTTCATCTTCCAAATCCAGATAACCTCAGTCGTTT
CCTCACGGGTAACTGTCCCTTTTTCAAGATGGAGCGATACTGGAGTGGAA
GTGGTGTCAACAAGAATAAAGCGATGGTGGAGCATTTGCAGCATTATGGA
GTGATTACATCAAAAAAGGTATCTGAAGTAATGGAAACTATTGATCGGGC
TTGCTTTGTGCCAGATGGTACTCCACCTTATGTTGACAGCCCAATGGCAA
TAGGTTACAATGCCACTATTTCAGCACCTCATATGCATGCAACATGCCTT
CAATTATTGGAGGAGAATCTGAAACCTGGCATGCACGCTTTGGATATTGG
TTCTGGAACTGGATATTTGACAGCATGCTTTGCCTTGATGGTTGGACCAC
AAGGTCGTGCTGTGGGTGTCGAGCACCTTCCTGAGTTGGTGGCTTCCTCA
ATCCAGAATATTGAAAAAAGTGCAGCGGCTCCTTTGCTGAAAAAAGGTTC
TCCCTCATTGCATGTTGGTGATGGAAAAAAAGGTGGGCCCAATTTGCCCC
CCATGAAGCAATACATTGGCCGAACCGCACCCCCCCAAAATCCCCCGGCC
CTTATTGACCCCCTTAAAACCCGGAAGCCAAATGGTGACTCCCCGTTGGC
AAAATACTCCCCGGAATCGAATGGGGTTAACAAAAACCCCAAAGGGCCCC
CCTAACCCTCGGGAGGAAACCCCCCGTCCTTTACCTCCCCCCCTACCCAC
TCCGGGAGCACCCTCTGGGGGGCGCGGGGGAGGGCTATAATTCCCTTTCC
CCCCTAAACAAGGTGCGCGACCCCTTTAGCCATCAAACACAACGCTTGCC
AATGGGGCAAACAAAAACCACCCCACCCATCCACCCTACACATGGGGGCG
GTTTATTCTTCCCCCTCATATAATTTCCCGATCGGAGTCGGGTGTCGCAC
ACCCCCCCACCCCTCCCCCCCCC
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