DY259937

Overview
NameDY259937
Unique NameDY259937
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length1073
Libraries
Library NameType
Fruit-TFcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY259937 vs. ExPASy Swiss-Prot
Match: PIMT_METVS (Protein-L-isoaspartate O-methyltransferase OS=Methanococcus vannielii (strain SB / ATCC 35089 / DSM 1224) GN=pcm PE=3 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 2.541e-11
Identity = 55/174 (31.61%), Postives = 84/174 (48.28%), Query Frame = 2
Query:  206 VNKNKAMVEHLQHYGVITSKKVSEVMETIDRACFVPD--GTPPYVDSPMAIGYNATISAPHMHATCLQLLEENLKPGMHALDIGSGTGYLTACFALMVGPQGRAVGVEHLPELVASSIQNIEKSAAAPLLKKGSPSLHV--GDGKKGGPNLPPMKQYIGRTAPPQNPPALIDPL 715
            +N+  ++V +L   G I  K V   + ++ R  FVP    +  Y D+P+ IGY  TISA HM     + L+  L  G + L+IG+G+GY  A    ++G  G+   +E + EL  S+ +N        LLK G  ++ V  GDG KG     P  +     A  + P  L + L
Sbjct:    3 LNEMVSVVTNLVERGYIRKKSVVSALLSVPRHKFVPKYLESSAYQDNPLEIGYGQTISAIHMVGIMCEELD--LDKGQNVLEIGTGSGYHAAVVLEIIGKSGKLTTIERVFELFNSAKEN--------LLKFGYNNIEVIYGDGTKGHIENAPYDRIYLTAAGKKVPEILFEQL 166          
BLAST of DY259937 vs. ExPASy Swiss-Prot
Match: PIMT2_ANADF (Protein-L-isoaspartate O-methyltransferase 2 OS=Anaeromyxobacter sp. (strain Fw109-5) GN=pcm2 PE=3 SV=2)

HSP 1 Score: 68.9366 bits (167), Expect = 5.661e-11
Identity = 54/170 (31.76%), Postives = 80/170 (47.06%), Query Frame = 2
Query:  212 KNKAMVEHLQHYGVITSKKVSEVMETIDRACFVPDG--TPPYVDSPMAIGYNATISAPHMHATCLQLLEENLKPGMHALDIGSGTGYLTACFALMVGPQGRAVGVEHLPELVASSIQNIEKSAAAPLLKKGSPSLHVGDGKKGGPNLPPMKQYIGRTAPPQNPPALIDPL 715
            + + MVE       I  ++V E M  + R  FVP+   +  Y+D P+ IG   TIS P++ A   Q L   L+ G   L++GSG+GY  A  A +    G   G+E  PEL A S++ + +      L  G+  L  GDG  G P   P +  +   A  + P  L + L
Sbjct:   39 ERRRMVEEQLAARGIRDRRVLEAMGKVPRERFVPEQWRSLAYLDEPLPIGRGQTISQPYVVAFMAQALA--LRGGERVLEVGSGSGYAAAVLAHLA---GAVYGIELEPELHARSVETLAE------LGYGNVHLRRGDGFLGWPERAPFRAIVVSCAMEEIPAPLWEQL 197          
BLAST of DY259937 vs. ExPASy Swiss-Prot
Match: PIMT_MYXXD (Protein-L-isoaspartate O-methyltransferase OS=Myxococcus xanthus (strain DK 1622) GN=pcm PE=3 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 7.393e-11
Identity = 51/165 (30.91%), Postives = 80/165 (48.48%), Query Frame = 2
Query:  230 EHLQHYGVITSKKVSEVMETIDRACFVPDGT--PPYVDSPMAIGYNATISAPHMHATCLQLLEENLKPGMHALDIGSGTGYLTACFALMVGPQGRAVGVEHLPELVASSIQNIEKSAAAPLLKKGSPSLHVGDGKKGGPNLPPMKQYIGRTAPPQNPPALIDPLK 718
            ++L  +G I   +V E +  ++RA FVP+        DSP+ IG+  TIS P++ A   + L+  L+     L+IG+G+GY TA  +L+         VE +PEL  S+ + + +     +      S   GDG  G P+  P    +   APP  P  L+  LK
Sbjct:    8 DYLSRHG-IKDARVLEAIARLNRADFVPEDLREEASADSPLPIGHGQTISQPYVVALMTEALQ--LQGDERVLEIGTGSGYQTALLSLLCR---EVYSVEIVPELAQSAREVLGRQGFENV------SFREGDGSLGWPDQAPFDAILAAAAPPDVPLQLLSQLK 160          
The following BLAST results are available for this feature:
BLAST of DY259937 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 53
Match NameE-valueIdentityDescription
PIMT_METVS2.541e-1131.61Protein-L-isoaspartate O-methyltransferase OS=Meth... [more]
PIMT2_ANADF5.661e-1131.76Protein-L-isoaspartate O-methyltransferase 2 OS=An... [more]
PIMT_MYXXD7.393e-1130.91Protein-L-isoaspartate O-methyltransferase OS=Myxo... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAP10YL04FM1 Fruit-TF Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY259937 ID=DY259937; Name=DY259937; organism=Citrus clementina; type=EST; length=1073bp
TTATTATATGCCTGGTTTAAAGCACATATTATCAACCTTCACTCTTATCC
CTCACCGTCATCGCTGTTCTTACTTACCATCACCGTCACCGTCACTTGTC
TCTTTGTCTTCTTCTTTTCATCTTCCAAATCCAGATAACCTCAGTCGTTT
CCTCACGGGTAACTGTCCCTTTTTCAAGATGGAGCGATACTGGAGTGGAA
GTGGTGTCAACAAGAATAAAGCGATGGTGGAGCATTTGCAGCATTATGGA
GTGATTACATCAAAAAAGGTATCTGAAGTAATGGAAACTATTGATCGGGC
TTGCTTTGTGCCAGATGGTACTCCACCTTATGTTGACAGCCCAATGGCAA
TAGGTTACAATGCCACTATTTCAGCACCTCATATGCATGCAACATGCCTT
CAATTATTGGAGGAGAATCTGAAACCTGGCATGCACGCTTTGGATATTGG
TTCTGGAACTGGATATTTGACAGCATGCTTTGCCTTGATGGTTGGACCAC
AAGGTCGTGCTGTGGGTGTCGAGCACCTTCCTGAGTTGGTGGCTTCCTCA
ATCCAGAATATTGAAAAAAGTGCAGCGGCTCCTTTGCTGAAAAAAGGTTC
TCCCTCATTGCATGTTGGTGATGGAAAAAAAGGTGGGCCCAATTTGCCCC
CCATGAAGCAATACATTGGCCGAACCGCACCCCCCCAAAATCCCCCGGCC
CTTATTGACCCCCTTAAAACCCGGAAGCCAAATGGTGACTCCCCGTTGGC
AAAATACTCCCCGGAATCGAATGGGGTTAACAAAAACCCCAAAGGGCCCC
CCTAACCCTCGGGAGGAAACCCCCCGTCCTTTACCTCCCCCCCTACCCAC
TCCGGGAGCACCCTCTGGGGGGCGCGGGGGAGGGCTATAATTCCCTTTCC
CCCCTAAACAAGGTGCGCGACCCCTTTAGCCATCAAACACAACGCTTGCC
AATGGGGCAAACAAAAACCACCCCACCCATCCACCCTACACATGGGGGCG
GTTTATTCTTCCCCCTCATATAATTTCCCGATCGGAGTCGGGTGTCGCAC
ACCCCCCCACCCCTCCCCCCCCC
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