DY259947
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DY259947 vs. ExPASy Swiss-Prot
Match: NU5C_ATRBE (NAD(P)H-quinone oxidoreductase subunit 5, chloroplastic OS=Atropa belladonna GN=ndhF PE=3 SV=1) HSP 1 Score: 156.377 bits (394), Expect = 9.991e-38 Identity = 80/136 (58.82%), Postives = 93/136 (68.38%), Query Frame = -3 Query: 3 MEHTYQYSWXXXXXXXXXXXXXXXXXLFFPTATKNLRRMWAFISILLLSIVMIFSIDLSIEQIDRTSIYQSLRSWTITSDLSFEFGYFIDPLTSIMSXXXXXXXXXXXIYSDNYMSHDQGYLRFFAYMSFFNASML 410 ME TY+Y+W + FPTATK+ RRMWAF S+LLLSIVMIFSI LSI+QI+ +S YQ + SW I +D S +FGY IDPLTSIMS IYSDNYM+HDQGYLRFFAYMSFF+ SML Sbjct: 1 MEQTYEYAWIIPFIPLPVPMLIGAGLILFPTATKSFRRMWAFQSVLLLSIVMIFSIYLSIQQINSSSFYQYVWSWIINNDFSLDFGYLIDPLTSIMSILITTVGIMVLIYSDNYMAHDQGYLRFFAYMSFFSTSML 136
BLAST of DY259947 vs. ExPASy Swiss-Prot
Match: NU5C_TOBAC (NAD(P)H-quinone oxidoreductase subunit 5, chloroplastic OS=Nicotiana tabacum GN=ndhF PE=3 SV=2) HSP 1 Score: 155.992 bits (393), Expect = 1.305e-37 Identity = 79/136 (58.09%), Postives = 92/136 (67.65%), Query Frame = -3 Query: 3 MEHTYQYSWXXXXXXXXXXXXXXXXXLFFPTATKNLRRMWAFISILLLSIVMIFSIDLSIEQIDRTSIYQSLRSWTITSDLSFEFGYFIDPLTSIMSXXXXXXXXXXXIYSDNYMSHDQGYLRFFAYMSFFNASML 410 ME TY+Y+W FPTATK+ RRMWAF S+LLLSIVM+FSI LSI+QI+ +S YQ + SW I +D S +FGY IDPLTSIMS IYSDNYM+HDQGYLRFFAYMSFF+ SML Sbjct: 1 MEQTYEYAWIIPFIPLPVPMLIGAGLFLFPTATKSFRRMWAFQSVLLLSIVMVFSIYLSIQQINSSSFYQYVWSWIINNDFSLDFGYLIDPLTSIMSILITTVGIMVLIYSDNYMAHDQGYLRFFAYMSFFSTSML 136
BLAST of DY259947 vs. ExPASy Swiss-Prot
Match: NU5C_RANMC (NAD(P)H-quinone oxidoreductase subunit 5, chloroplastic OS=Ranunculus macranthus GN=ndhF PE=3 SV=1) HSP 1 Score: 155.992 bits (393), Expect = 1.305e-37 Identity = 81/136 (59.56%), Postives = 91/136 (66.91%), Query Frame = -3 Query: 3 MEHTYQYSWXXXXXXXXXXXXXXXXXLFFPTATKNLRRMWAFISILLLSIVMIFSIDLSIEQIDRTSIYQSLRSWTITSDLSFEFGYFIDPLTSIMSXXXXXXXXXXXIYSDNYMSHDQGYLRFFAYMSFFNASML 410 MEH YQ +W L FPT TK +RR+WAF S+LLLSI+MIFS+ LSI+QID IYQ + SWTI +D S +FG FIDPLTSIM IYSDNYMSHDQGYLRFFAYMSFFNASML Sbjct: 1 MEHIYQDAWIIPFIPLPIPIAIGLGLLLFPTTTKRIRRIWAFFSVLLLSIIMIFSVILSIKQIDGNPIYQYVWSWTINNDFSLDFGNFIDPLTSIMLILITTVGIMVLIYSDNYMSHDQGYLRFFAYMSFFNASML 136
BLAST of DY259947 vs. ExPASy Swiss-Prot
Match: NU5C_POPTR (NAD(P)H-quinone oxidoreductase subunit 5, chloroplastic OS=Populus trichocarpa GN=ndhF PE=3 SV=1) HSP 1 Score: 155.992 bits (393), Expect = 1.305e-37 Identity = 79/136 (58.09%), Postives = 91/136 (66.91%), Query Frame = -3 Query: 3 MEHTYQYSWXXXXXXXXXXXXXXXXXLFFPTATKNLRRMWAFISILLLSIVMIFSIDLSIEQIDRTSIYQSLRSWTITSDLSFEFGYFIDPLTSIMSXXXXXXXXXXXIYSDNYMSHDQGYLRFFAYMSFFNASML 410 MEHTYQY W L FP +TK L R+WAF S+LLLSIVM+FSIDL I+QI+ +SIYQ + SWTI +D S EFGY IDPLTSI+ +YSD+YMSHDQGYLRFF YMSFFN SML Sbjct: 1 MEHTYQYLWIISFVTLPVPMLIGMGLLLFPVSTKKLHRIWAFPSVLLLSIVMVFSIDLFIQQINSSSIYQYVWSWTINNDFSLEFGYLIDPLTSILLILITTVGILVLVYSDSYMSHDQGYLRFFVYMSFFNTSML 136
BLAST of DY259947 vs. ExPASy Swiss-Prot
Match: NU5C_NICSY (NAD(P)H-quinone oxidoreductase subunit 5, chloroplastic OS=Nicotiana sylvestris GN=ndhF PE=3 SV=1) HSP 1 Score: 155.992 bits (393), Expect = 1.305e-37 Identity = 79/136 (58.09%), Postives = 92/136 (67.65%), Query Frame = -3 Query: 3 MEHTYQYSWXXXXXXXXXXXXXXXXXLFFPTATKNLRRMWAFISILLLSIVMIFSIDLSIEQIDRTSIYQSLRSWTITSDLSFEFGYFIDPLTSIMSXXXXXXXXXXXIYSDNYMSHDQGYLRFFAYMSFFNASML 410 ME TY+Y+W FPTATK+ RRMWAF S+LLLSIVM+FSI LSI+QI+ +S YQ + SW I +D S +FGY IDPLTSIMS IYSDNYM+HDQGYLRFFAYMSFF+ SML Sbjct: 1 MEQTYEYAWIIPFIPLPVPMLIGAGLFLFPTATKSFRRMWAFQSVLLLSIVMVFSIYLSIQQINSSSFYQYVWSWIINNDFSLDFGYLIDPLTSIMSILITTVGIMVLIYSDNYMAHDQGYLRFFAYMSFFSTSML 136
BLAST of DY259947 vs. ExPASy Swiss-Prot
Match: NU5C_DRIGR (NAD(P)H-quinone oxidoreductase subunit 5, chloroplastic OS=Drimys granadensis GN=ndhF PE=3 SV=1) HSP 1 Score: 155.992 bits (393), Expect = 1.305e-37 Identity = 82/136 (60.29%), Postives = 91/136 (66.91%), Query Frame = -3 Query: 3 MEHTYQYSWXXXXXXXXXXXXXXXXXLFFPTATKNLRRMWAFISILLLSIVMIFSIDLSIEQIDRTSIYQSLRSWTITSDLSFEFGYFIDPLTSIMSXXXXXXXXXXXIYSDNYMSHDQGYLRFFAYMSFFNASML 410 M+ YQY+W L PTATKNLRRMWAF S+ LLSIVM+FS DLS++QID +SIYQ L SWTI +D S EFG+ IDPLTSIMS IYSD YMSHDQGYLRFFAYMSF N SML Sbjct: 1 MQPIYQYAWIIPFVPLPVTMSIGLGLLLVPTATKNLRRMWAFPSVSLLSIVMVFSADLSVQQIDGSSIYQYLWSWTINNDFSLEFGHLIDPLTSIMSILITTVGIMVLIYSDKYMSHDQGYLRFFAYMSFSNTSML 136
BLAST of DY259947 vs. ExPASy Swiss-Prot
Match: NU5C_LACSA (NAD(P)H-quinone oxidoreductase subunit 5, chloroplastic OS=Lactuca sativa GN=ndhF PE=3 SV=2) HSP 1 Score: 155.221 bits (391), Expect = 2.226e-37 Identity = 80/136 (58.82%), Postives = 93/136 (68.38%), Query Frame = -3 Query: 3 MEHTYQYSWXXXXXXXXXXXXXXXXXLFFPTATKNLRRMWAFISILLLSIVMIFSIDLSIEQIDRTSIYQSLRSWTITSDLSFEFGYFIDPLTSIMSXXXXXXXXXXXIYSDNYMSHDQGYLRFFAYMSFFNASML 410 ME TYQY+W L FPTATK+LRRMW+F S+LLLSIVMIFS++LSI+QI+ + +YQ + SW I +D S EFGY IDPLTSIM IYSDNYMSHD GYLRFFAYMSFF+ SML Sbjct: 1 MEQTYQYAWIIPFLPLPVPMLIGLGLLLFPTATKSLRRMWSFQSVLLLSIVMIFSMNLSIQQINSSYVYQYVWSWIINNDFSLEFGYLIDPLTSIMLILITTVGIMVLIYSDNYMSHDHGYLRFFAYMSFFSTSML 136
BLAST of DY259947 vs. ExPASy Swiss-Prot
Match: NU5C_AMBTC (NAD(P)H-quinone oxidoreductase subunit 5, chloroplastic OS=Amborella trichopoda GN=ndhF PE=3 SV=1) HSP 1 Score: 155.221 bits (391), Expect = 2.226e-37 Identity = 82/136 (60.29%), Postives = 92/136 (67.65%), Query Frame = -3 Query: 3 MEHTYQYSWXXXXXXXXXXXXXXXXXLFFPTATKNLRRMWAFISILLLSIVMIFSIDLSIEQIDRTSIYQSLRSWTITSDLSFEFGYFIDPLTSIMSXXXXXXXXXXXIYSDNYMSHDQGYLRFFAYMSFFNASML 410 ME TYQY+W L P ATK++RR+WAF S+LLLSIVM+FS +LSI+QI+ SIYQ L SWTI SD S EFGY ID LTSIMS IYSDNYMSHD+GYLRFFAYMSFFN SML Sbjct: 1 MERTYQYAWIIPFLTLAVPILIGLGLLLVPPATKSIRRIWAFPSVLLLSIVMVFSTNLSIQQINGNSIYQYLWSWTINSDSSLEFGYLIDSLTSIMSILIATVGMMVLIYSDNYMSHDKGYLRFFAYMSFFNTSML 136
BLAST of DY259947 vs. ExPASy Swiss-Prot
Match: NU5C_BRADI (NAD(P)H-quinone oxidoreductase subunit 5, chloroplastic OS=Brachypodium distachyon GN=ndhF PE=3 SV=1) HSP 1 Score: 154.451 bits (389), Expect = 3.797e-37 Identity = 78/136 (57.35%), Postives = 89/136 (65.44%), Query Frame = -3 Query: 3 MEHTYQYSWXXXXXXXXXXXXXXXXXLFFPTATKNLRRMWAFISILLLSIVMIFSIDLSIEQIDRTSIYQSLRSWTITSDLSFEFGYFIDPLTSIMSXXXXXXXXXXXIYSDNYMSHDQGYLRFFAYMSFFNASML 410 MEHTYQY+W P ATKN RR+WAF S+LLLSI M+FS+ LSI+QI+ +SIYQ L SWTI +D S EFGY IDPLTSIM IYSD YMSHD+GYLRFF Y+SFFN SML Sbjct: 1 MEHTYQYAWVIPLLPLPVILSMGFGLFLIPIATKNFRRIWAFPSVLLLSIAMVFSVQLSIQQINGSSIYQYLWSWTINNDFSLEFGYLIDPLTSIMLMLITTVGILVLIYSDGYMSHDEGYLRFFIYISFFNISML 136
BLAST of DY259947 vs. ExPASy Swiss-Prot
Match: NU5C_OENPA (NAD(P)H-quinone oxidoreductase subunit 5, chloroplastic OS=Oenothera parviflora GN=ndhF PE=3 SV=1) HSP 1 Score: 154.066 bits (388), Expect = 4.959e-37 Identity = 79/136 (58.09%), Postives = 92/136 (67.65%), Query Frame = -3 Query: 3 MEHTYQYSWXXXXXXXXXXXXXXXXXLFFPTATKNLRRMWAFISILLLSIVMIFSIDLSIEQIDRTSIYQSLRSWTITSDLSFEFGYFIDPLTSIMSXXXXXXXXXXXIYSDNYMSHDQGYLRFFAYMSFFNASML 410 ME+TYQYSW L FPTATKN RR+W+F SILLLS+VM+ S+ LSI+QI+R+ IYQ + SWTI +D S EFG+ IDPL SIM YSDNYMSHDQGYLRFFAY+SFFN SML Sbjct: 1 MEYTYQYSWIIPFIPLPVPILIGMGLLLFPTATKNHRRVWSFPSILLLSMVMLLSVYLSIQQINRSFIYQYVWSWTINNDFSLEFGHLIDPLASIMLILITTVGILVLFYSDNYMSHDQGYLRFFAYLSFFNTSML 136 The following BLAST results are available for this feature:
BLAST of DY259947 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 121
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Sequences
The
following sequences are available for this feature:
EST sequence >DY259947 ID=DY259947; Name=DY259947; organism=Citrus clementina; type=EST; length=595bpback to top |