DY259953

Overview
NameDY259953
Unique NameDY259953
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length977
Libraries
Library NameType
Fruit-TFcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY259953 vs. ExPASy Swiss-Prot
Match: PKS1_DICDI (Probable polyketide synthase 1 OS=Dictyostelium discoideum GN=stlA PE=1 SV=1)

HSP 1 Score: 80.8777 bits (198), Expect = 1.258e-14
Identity = 64/221 (28.96%), Postives = 98/221 (44.34%), Query Frame = 1
Query:   88 VEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGA-----SPYPGLECSGTILSVGKNVSRWKVGDQVCALLGGGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVFMTSHLSPGESFLVHGGSSGIGTFAIQMGKCQG------VRVFVTAGNEEKLAVCKDLGADVCILYKTED---FVARMKEETG--GKGVDVILDCLGTSHFQRN 702
            ++   + ++++ IKVE   +N  D L  KG  P          +P  GLECSG I  +G NV+ + VG  V            V      V+  P  +S  +AA+ P V CT W ++F    LS  ES L+H  + G+G  ++ + K +         V+ T G+ EK    K L  +   L+K +    F  R KE +      +DVIL+ L     + N
Sbjct: 1948 IKQSMLTENQIEIKVECVGINFKDNLFYKGLLPQEIFRMGDIYNPPYGLECSGVITRIGSNVTEYSVGQNVFGF-ARHSLGSHVVTNKDLVILKPDTISFSEAASIPVVYCTAWYSLFNIGQLSNEESILIHSATGGVGLASLNLLKMKNQQQQPLTNVYATVGSNEKK---KFLIDNFNNLFKEDGENIFSTRDKEYSNQLESKIDVILNTLSGEFVESN 2164          
BLAST of DY259953 vs. ExPASy Swiss-Prot
Match: ZADH2_HUMAN (Zinc-binding alcohol dehydrogenase domain-containing protein 2 OS=Homo sapiens GN=ZADH2 PE=1 SV=1)

HSP 1 Score: 80.4925 bits (197), Expect = 1.643e-14
Identity = 68/225 (30.22%), Postives = 106/225 (47.11%), Query Frame = 1
Query:   31 MKAIVITQ--PGSPEVLQL-QEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYPGLECSGTILSVGKNVS-RWKVGDQVCALLGGGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVFMTSHLSPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGNEEKLAVCKDLGADVCILYKTEDFVARMKEETGGKGVDVILDCLGTSHF 693
            M+ +V+T+  P   E + L ++   P   D ++L++     +N +D     G Y P        G E  G ++++G + S R+ VG Q  A +  G +AE   VPA    PVPS     +         T + ++     LS G+  LV   + G G FA+Q+ K     V  T  ++EK A  K LG D  I YKTE     +K+E   +GVDV+ + +G + F
Sbjct:   33 MQKLVVTRLSPNFREAVTLSRDCPVPLPGDGDLLVRNRFVGVNASDINYSAGRYDPSVKPPFDIGFEGIGEVVALGLSASARYTVG-QAVAYMAPGSFAEYTVVPASIATPVPS--VKPEYLTLLVSGTTAYISLKELGGLSEGKKVLVTAAAGGTGQFAMQLSKKAKCHVIGTCSSDEKSAFLKSLGCDRPINYKTEPVGTVLKQEY-PEGVDVVYESVGGAMF 253          
BLAST of DY259953 vs. ExPASy Swiss-Prot
Match: RT4I1_HUMAN (Reticulon-4-interacting protein 1, mitochondrial OS=Homo sapiens GN=RTN4IP1 PE=1 SV=2)

HSP 1 Score: 79.337 bits (194), Expect = 3.661e-14
Identity = 77/251 (30.68%), Postives = 110/251 (43.82%), Query Frame = 1
Query:    4 NSTLESEGTMKAIVITQPGSPEVLQL-QEVEDPQIK-DDEVLIKVEATALNRADTLQRKGSYPPPKGASPYP--------------GLECSGTILSVGKNVSRWKVGDQVCALLGG---GGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVFMTSHLSP----GESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGNEEKLAVCKDLGADVCILYKTEDFVARMKEETGGKGVDVILDCLGTS 687
            ++T      M A VI + G  EVL+  Q +  P I   +EV++KV A ++N  D   R G           P              G + SG ++  G +V  +K GD+V A +     G  +E V V   +V   P  ++   AA+ P VA T WS +     L+     G+  L+ G S G+GTFAIQ+ K     V      +    V K LGAD  I YK+     ++K     K  D ILD +G S
Sbjct:   34 STTSPRSTVMPAWVIDKYGKNEVLRFTQNMMMPIIHYPNEVIVKVHAASVNPIDVNMRSGYGATALNMKRDPLHVKIKGEEFPLTLGRDVSGVVMECGLDVKYFKPGDEVWAAVPPWKQGTLSEFVVVSGNEVSHKPKSLTHTQAASLPYVALTAWSAINKVGGLNDKNCTGKRVLILGASGGVGTFAIQVMKAWDAHVTAVCSQDASELVRK-LGADDVIDYKSGSVEEQLKSL---KPFDFILDNVGGS 280          
BLAST of DY259953 vs. ExPASy Swiss-Prot
Match: QORL1_BOVIN (Quinone oxidoreductase-like protein 1 OS=Bos taurus GN=CRYZL1 PE=2 SV=1)

HSP 1 Score: 79.337 bits (194), Expect = 3.661e-14
Identity = 68/225 (30.22%), Postives = 109/225 (48.44%), Query Frame = 1
Query:   31 MKAIVITQPGSPEVLQL--QEVED-PQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYPGLECSGTILSVGKNVSRWKVGDQVCALLG----GGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVFMTSHLSPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGNEEKLAVCKDLGADVCILYKTEDFVARMK----EETGGKGVDVILD 672
            MK +   Q  + E +    QE E+ P  +D+ V ++V+A AL++ +T +        K   P  G E +G +L VG  VS ++  D+V  +L       G  E V V    ++  P  V+  +AA        V++ +   SHLSPG+S L+  G+S +GT AIQ+   +G +V  TA + E     +     +  +    +  A +     EETGG GVD++LD
Sbjct:    1 MKGLYFQQSSTNEEITFVFQERENLPVTEDNYVKLQVKACALSQINT-KLLAEMKMEKEFFPV-GREVAGIVLDVGSKVSFFQPDDEVVGILPLDSEDPGLCEAVRVHEHYLVHKPEKVTWTEAAGTIRDGLRVYTALHYLSHLSPGKSVLIMDGASALGTIAIQLAHHRGAKVISTACSLEDKQFLERFRPPIARVIDVSNGKAHVAESCLEETGGLGVDIVLD 223          
BLAST of DY259953 vs. ExPASy Swiss-Prot
Match: YDJL_ECOLI (Uncharacterized zinc-type alcohol dehydrogenase-like protein ydjL OS=Escherichia coli (strain K12) GN=ydjL PE=3 SV=1)

HSP 1 Score: 78.9518 bits (193), Expect = 4.781e-14
Identity = 67/247 (27.13%), Postives = 111/247 (44.94%), Query Frame = 1
Query:   85 EVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYP---GLECSGTILSVGKNVSRWKVGDQV--------CAL-----------------LG------GGGYAEKVAVPAGQVLPV--------PSGVSLKDAAAFPEVACTVWSTVFMTSHLSPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGNEEKLAV----CKDLGADVCILYKTEDFVARMKEETGGKGVDVILDCLGTS 687
            +V  P    ++V+I+++A A+  AD       Y    G+  +    G E +G I  VG+ V  WKVG +V        C +                 LG      GGG+++   VP G++L +        P GV  +DAA    + C  + ++   S   PG+  +V G +  +G F++QM +  G    V  G +E +AV     K+LGA   +   TED VAR ++  G   + ++++C G +
Sbjct:   18 DVPQPMCGPEDVVIEIKAAAICGADMKH----YNVDSGSDEFNSIRGHEFAGCIAQVGEKVKDWKVGQRVVSDNSGHVCGVCPACEQGDFLCCTEKVNLGLDNNTWGGGFSKYCLVP-GEILKIHRHALWEIPDGVDYEDAAVLDPI-CNAYKSIAQQSKFLPGQDVVVIG-TGPLGLFSVQMARIMGAVNIVVVGLQEDVAVRFPVAKELGATAVVNGSTEDVVARCQQICGKDNLGLVIECSGAN 257          
BLAST of DY259953 vs. ExPASy Swiss-Prot
Match: PKS45_DICDI (Probable polyketide synthase 45 OS=Dictyostelium discoideum GN=pks45 PE=3 SV=1)

HSP 1 Score: 78.9518 bits (193), Expect = 4.781e-14
Identity = 56/198 (28.28%), Postives = 100/198 (50.51%), Query Frame = 1
Query:   85 EVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKG------ASPYPGLECSGTILSVGKNVSRWKVGDQVCALLGGGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVFMTSHL--SPGESFLVHGGSSGIGTFAIQMGKCQGV--RVFVTAGNEEKLAVCKDLGAD-VCILY--KTEDFVARMKEE 639
            E +   +K++E+ ++V AT +N  D+L  +   PP         + P  G+ECSG +  +G  V+++KVGD V  +      +  +      VL  P  +S  +AA+ P V CT + ++F + +L     ES L+H  S GIG   + + K  G   +++VT G++EK    ++   D +  +Y  +  DF+  +K +
Sbjct: 1910 EAKQSNLKENEIEVQVVATGINFKDSLIFRNLVPPVLANHDGDYSKPEFGIECSGIVSRIGSKVTKFKVGDSVLGISWKSTSSHAINYQDAFVLK-PDNISFVEAASIPLVYCTSFYSLFYSGNLKIENNESVLIHQASGGIGLACLNILKSCGFKSKLYVTVGSKEKEDYLRETYGDFITGIYSSRNTDFLENIKTD 2106          
BLAST of DY259953 vs. ExPASy Swiss-Prot
Match: PKS37_DICDI (Probable polyketide synthase 37 OS=Dictyostelium discoideum GN=stlB PE=2 SV=1)

HSP 1 Score: 78.9518 bits (193), Expect = 4.781e-14
Identity = 61/255 (23.92%), Postives = 108/255 (42.35%), Query Frame = 1
Query:    4 NSTLESEGTMKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYPGLECSGTILSVGKNVSRWKVGDQVCALLGGGGYAEKVAVPAGQVLPVP---------SGVSLKDA----------AAFPEVACTVWSTVFMTSHLSPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAG-NEEKLAVCKDLGADVCILYKTE--DFVARMKEETGGKGVDVILDCLGTSHFQRN 702
            N+++        + ++  G    L++++    +    +VL++VE   LN  D L+  G    P   +   G E SG ++ +G+ V+   VG  V  +         V   +  V P+P         S  ++ D              P V  T W ++ +   L  GE  L+H G  G+G   IQ+    G  + VT G NE+K  + K+ G D   +Y +    F   +   T G+GVD++L+ L   + +++
Sbjct: 1700 NNSINYNNNYYRVELSDNGIISDLKIKQFRQMKCGVGQVLVRVEMCTLNFRDILKSLGRDYDPIHLNSM-GDEFSGKVIEIGEGVNNLSVGQYVFGINMSKSMGSFVCCNSDLVFPIPIPTPSSSSSSNENIDDQEIISKLLNQYCTIPIVFLTSWYSIVIQGRLKKGEKILIHSGCGGVGLATIQISMMIGAEIHVTVGSNEKKQYLIKEFGIDEKRIYSSRSLQFYNDLMVNTDGQGVDMVLNSLSGEYLEKS 1953          
BLAST of DY259953 vs. ExPASy Swiss-Prot
Match: RT4I1_MOUSE (Reticulon-4-interacting protein 1, mitochondrial OS=Mus musculus GN=Rtn4ip1 PE=1 SV=2)

HSP 1 Score: 78.5666 bits (192), Expect = 6.244e-14
Identity = 82/252 (32.54%), Postives = 114/252 (45.24%), Query Frame = 1
Query:    7 STLESEGT-MKAIVITQPGSPEVLQL-QEVEDPQIK-DDEVLIKVEATALNRADTLQRKGS------------YPPPKGASPYP---GLECSGTILSVGKNVSRWKVGDQVCALLGG---GGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVFMTSHLSP----GESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGNEEKLAVCKDLGADVCILYKTEDFVARMKEETGGKGVDVILDCLGTS 687
            ST  +  T M A VI + G  EVL+  Q +  P I   +EV+IKV A ++N  D   R G             +   KG   +P   G + SG ++  G +V  ++ GD+V A +     G  +E V V   +V   P  ++   AA+ P VA T WS +     LS     G+  L+ G S G+GTFAIQ+ K  G  V      +    V K LGAD  I Y       ++K     K  D ILD +G S
Sbjct:   34 STTSARSTVMPAWVIDKYGKNEVLRFTQNMMLPIIHYPNEVIIKVHAASVNPIDVNMRSGYGATALNMKRDPLHMKTKGEE-FPLTLGRDVSGVVMECGLDVKYFQPGDEVWAAVPPWKQGTLSEFVVVSGNEVSHKPKSLTHTQAASLPYVALTAWSAINKVGGLSDKNCKGKRALILGASGGVGTFAIQVMKAWGAHVTAVCSKDASELVRK-LGADEVIDYTLGSVEEQLKSL---KLFDFILDNVGGS 280          
BLAST of DY259953 vs. ExPASy Swiss-Prot
Match: PKS25_DICDI (Probable polyketide synthase 25 OS=Dictyostelium discoideum GN=pks25 PE=3 SV=1)

HSP 1 Score: 78.5666 bits (192), Expect = 6.244e-14
Identity = 74/248 (29.84%), Postives = 124/248 (50.00%), Query Frame = 1
Query:   91 EDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYPGLECSGTILSVG-KNVSRWKVGDQVCALLGGGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVFMTSHLSPGESFLVHGGSSGIGTFAIQMGKC--QGVRVFVTAGNEEKLA-VCKDLGADVCILYKTED--FVARMKE---ETGGK--GVDVILDCLGT----SHFQRNPPQP*TLMGGFS*LDPG--WDQNRIKYNF 783
            +D  +K  ++ ++++AT LN  D L   G     KG S   GL+ SG +  VG K+   +KVGD+V  + G    +  + + +      PS ++   AA+ P V  T   +++   +L  GES L+H GS G+G  A+++ K       +FVT G+EEK   +    G  +  +Y T D  +  ++K    E G +  GVD+I++ L +    S+F+   P+   +    + L+P    D N+ KYNF
Sbjct: 1688 KDSILKPYDIEVEIKATGLNYKDYLVYSGLIKL-KGDSVDFGLDFSGRVSRVGIKSSKEFKVGDEVYGI-GQSTSSSHIIIDSMHACHKPSKITHVQAASIPAVYATSIHSLYNIGNLREGESILIHSGSGGVGLSALEILKSNNHSSPIFVTVGSEEKKQYLINTYGNLITGIYSTRDTNYQKQIKNKLIELGYETHGVDLIINTLSSEFMDSNFKCLNPEGRIVDLTITHLNPNEFIDNNKFKYNF 1933          
BLAST of DY259953 vs. ExPASy Swiss-Prot
Match: ADH2_KLUMA (Alcohol dehydrogenase 2 OS=Kluyveromyces marxianus GN=ADH2 PE=3 SV=3)

HSP 1 Score: 78.5666 bits (192), Expect = 6.244e-14
Identity = 63/242 (26.03%), Postives = 104/242 (42.98%), Query Frame = 1
Query:   28 TMKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYPGLECSGTILSVGKNVSRWKVGD--------------QVCAL----------LGG----GGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVFMTSHLSPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGNEEKLAVCKDLGADVCILY-KTEDFVARMKEETGGKGVDVI 666
            T K ++  + G    L  +++  P+ K +E+LI V+ + +   D    KG +P         G E +G ++++G NV  WK+GD              + C L          L G    G + +     A Q   +P+G  L   A       TV+  +  T+ +  G+   + G + G+G+ A+Q  K  G RV    G E K  + K LG +V I + K++D V  + + T G    VI
Sbjct:    6 TQKGVIFYENGGQ--LYYKDIPVPKPKSNELLINVKYSGVCHTDLHAWKGDWPLDTKLPLVGGHEGAGVVVAMGDNVKGWKIGDLAGIKWLNGSCMNCEECELSNESNCPDADLSGYTHDGSFQQYATADAVQAAHIPAGTDLAQVAPILCAGVTVYKAL-KTAEMKAGDWVAISGAAGGLGSLAVQYAKAMGFRVLGIDGGEGKEELFKSLGGEVFIDFTKSKDIVGEVIKATNGGAHGVI 244          
The following BLAST results are available for this feature:
BLAST of DY259953 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 124
Match NameE-valueIdentityDescription
PKS1_DICDI1.258e-1428.96Probable polyketide synthase 1 OS=Dictyostelium di... [more]
ZADH2_HUMAN1.643e-1430.22Zinc-binding alcohol dehydrogenase domain-containi... [more]
RT4I1_HUMAN3.661e-1430.68Reticulon-4-interacting protein 1, mitochondrial O... [more]
QORL1_BOVIN3.661e-1430.22Quinone oxidoreductase-like protein 1 OS=Bos tauru... [more]
YDJL_ECOLI4.781e-1427.13Uncharacterized zinc-type alcohol dehydrogenase-li... [more]
PKS45_DICDI4.781e-1428.28Probable polyketide synthase 45 OS=Dictyostelium d... [more]
PKS37_DICDI4.781e-1423.92Probable polyketide synthase 37 OS=Dictyostelium d... [more]
RT4I1_MOUSE6.244e-1432.54Reticulon-4-interacting protein 1, mitochondrial O... [more]
PKS25_DICDI6.244e-1429.84Probable polyketide synthase 25 OS=Dictyostelium d... [more]
ADH2_KLUMA6.244e-1426.03Alcohol dehydrogenase 2 OS=Kluyveromyces marxianus... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAP10YM02FM1 Fruit-TF Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY259953 ID=DY259953; Name=DY259953; organism=Citrus clementina; type=EST; length=977bp
TTTAATTCTACTCTGGAAAGTGAAGGCACAATGAAGGCAATAGTGATAAC
TCAACCCGGTAGCCCAGAAGTGCTGCAGTTGCAAGAAGTAGAAGACCCTC
AAATCAAAGACGACGAAGTGTTGATCAAAGTCGAAGCTACTGCCCTGAAC
CGGGCCGACACTCTTCAACGAAAAGGCTCCTACCCTCCACCCAAAGGCGC
CAGCCCTTACCCGGGTCTCGAATGTTCCGGAACCATCCTGTCCGTTGGTA
AAAACGTCTCTAGATGGAAAGTCGGCGACCAGGTGTGTGCTCTGCTTGGT
GGAGGAGGGTATGCTGAGAAAGTGGCTGTTCCAGCTGGACAAGTTCTTCC
CGTTCCATCTGGTGTCTCACTCAAAGATGCTGCTGCGTTTCCGGAGGTGG
CTTGCACTGTTTGGTCAACGGTTTTCATGACCAGTCACCTATCCCCAGGG
GAGTCATTTCTGGTTCATGGGGGCTCTAGTGGAATTGGTACATTTGCGAT
TCAGATGGGAAAATGCCAAGGAGTGAGAGTCTTTGTTACAGCAGGAAATG
AGGAAAAGCTGGCTGTTTGCAAGGATCTTGGTGCGGATGTGTGCATCCTT
TACAAGACTGAGGATTTTGTTGCACGAATGAAGGAAGAAACTGGGGGGAA
AGGTGTTGATGTAATTTTAGATTGCCTGGGAACCTCCCACTTTCAGCGTA
ACCCTCCACAGCCCTGAACATTGATGGGAGGCTTTTCCTAATTGGACCCC
GGGTGGGACCAAAACCGAATTAAATATAACTTCCCCTGTTGCCAAACGCC
CCCTTGTGCAAGCGGTGGGTTCGCGAACCTAAAATAAAAAAAACAAAACT
TTATTTTCCTCGGGGCGGTAAAAAATGTTTGGCCCCCCACTGCCCATGGG
GAACGGGGACCCTCGCCTCCCCCTCTCTCCCCCCCTGCGGAAACCCCCCC
AACTCCCCCCCTCCCGGCGCAGAACCC
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