DY259959

Overview
NameDY259959
Unique NameDY259959
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length1098
Libraries
Library NameType
Fruit-TFcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY259959 vs. ExPASy Swiss-Prot
Match: ARF5_ARATH (Probable ADP-ribosylation factor At2g18390 OS=Arabidopsis thaliana GN=At2g18390 PE=2 SV=1)

HSP 1 Score: 154.066 bits (388), Expect = 1.383e-36
Identity = 75/165 (45.45%), Postives = 108/165 (65.45%), Query Frame = 2
Query:    2 RILMLGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRVVEARDELHRMLNEDELRDAVLLVFANKQDLPNAMNAAEITDKLGLHSL-RPRHWYIQSTCATSGEGLYEGLDWLSNNLANKAY 493
            RILM+GLD +GKTTI+ K+   +     PT+GFN++T+ Y+  +  +WDVGGQ  IR  WR+YF+ T GL++VVDS+D  R+ + + EL  +L E+ L  + LL+ ANKQD+  A+   EI   L L S+ + RHW I    A +GEGL EG DWL  ++A++ Y
Sbjct:   18 RILMVGLDNSGKTTIVLKINGEDTSVISPTLGFNIKTIIYQKYTLNIWDVGGQKTIRSYWRNYFEQTDGLVWVVDSSDLRRLDDCKMELDNLLKEERLAGSSLLILANKQDIQGALTPDEIGKVLNLESMDKSRHWKIVGCSAYTGEGLLEGFDWLVQDIASRIY 182          
BLAST of DY259959 vs. ExPASy Swiss-Prot
Match: ARL5C_MOUSE (ADP-ribosylation factor-like protein 5C OS=Mus musculus GN=Arl5c PE=2 SV=1)

HSP 1 Score: 152.91 bits (385), Expect = 3.081e-36
Identity = 69/155 (44.52%), Postives = 107/155 (69.03%), Query Frame = 2
Query:    2 RILMLGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRVVEARDELHRMLNEDELRDAVLLVFANKQDLPNAMNAAEITDKLGLHSLRPRHWYIQSTCATSGEGLYEGLDWL 466
            +++++GLD AGKTTILY+    E+V T  TIG NVE +  +   F +WD+GGQ+ +R  W  Y+ N + +I V+DS DR+R++  R+EL++ML  + L++A +L+FANKQD+ ++M  AEI+  L L +++   W+IQ  CA +GEGL  GL W+
Sbjct:   18 KVIIVGLDNAGKTTILYQFLTNEVVHTCSTIGSNVEEIVLRKTHFLMWDLGGQEALRSTWDTYYSNAEFVILVIDSTDRNRLLTTREELYKMLAHEALQNASVLIFANKQDVKDSMTTAEISQFLTLSAIKDHPWHIQGCCALTGEGLPAGLQWM 172          
BLAST of DY259959 vs. ExPASy Swiss-Prot
Match: ARL4A_RAT (ADP-ribosylation factor-like protein 4A OS=Rattus norvegicus GN=Arl4a PE=2 SV=1)

HSP 1 Score: 150.599 bits (379), Expect = 1.529e-35
Identity = 75/167 (44.91%), Postives = 111/167 (66.47%), Query Frame = 2
Query:    5 ILMLGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEY-----KNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRVVEARDELHRMLNEDELRDAVLLVFANKQDLPNAMNAAEITDKLGLHSL-RPRHWYIQSTCATSGEGLYEGLDWLSNNLANK 487
            I++LGLD AGKTT+LY+L+  E V T+PT GFN E ++      K ++F  WDVGGQ+K+RPLW+ Y + T G++FVVDS D +R+ EA+ ELH++    E +   +L+ ANKQDL N+++ +EI   L +  L     W++Q TCA  G+GL EGL+ L + +  +
Sbjct:   23 IVILGLDCAGKTTVLYRLQFNEFVNTVPTKGFNTEKIKVTLGNSKTVTFHFWDVGGQEKLRPLWKSYTRCTDGIVFVVDSVDVERMEEAKTELHKITRISENQGVPVLIVANKQDLRNSLSLSEIEKLLAMGELSSSTPWHLQPTCAIIGDGLKEGLEKLHDMIIKR 189          
BLAST of DY259959 vs. ExPASy Swiss-Prot
Match: ARL4A_MOUSE (ADP-ribosylation factor-like protein 4A OS=Mus musculus GN=Arl4a PE=2 SV=1)

HSP 1 Score: 150.599 bits (379), Expect = 1.529e-35
Identity = 75/167 (44.91%), Postives = 111/167 (66.47%), Query Frame = 2
Query:    5 ILMLGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEY-----KNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRVVEARDELHRMLNEDELRDAVLLVFANKQDLPNAMNAAEITDKLGLHSL-RPRHWYIQSTCATSGEGLYEGLDWLSNNLANK 487
            I++LGLD AGKTT+LY+L+  E V T+PT GFN E ++      K ++F  WDVGGQ+K+RPLW+ Y + T G++FVVDS D +R+ EA+ ELH++    E +   +L+ ANKQDL N+++ +EI   L +  L     W++Q TCA  G+GL EGL+ L + +  +
Sbjct:   23 IVILGLDCAGKTTVLYRLQFNEFVNTVPTKGFNTEKIKVTLGNSKTVTFHFWDVGGQEKLRPLWKSYTRCTDGIVFVVDSVDVERMEEAKTELHKITRISENQGVPVLIVANKQDLRNSLSLSEIEKLLAMGELSSSTPWHLQPTCAIIGDGLKEGLEKLHDMIIKR 189          
BLAST of DY259959 vs. ExPASy Swiss-Prot
Match: ARL4A_HUMAN (ADP-ribosylation factor-like protein 4A OS=Homo sapiens GN=ARL4A PE=2 SV=2)

HSP 1 Score: 150.599 bits (379), Expect = 1.529e-35
Identity = 75/167 (44.91%), Postives = 111/167 (66.47%), Query Frame = 2
Query:    5 ILMLGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEY-----KNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRVVEARDELHRMLNEDELRDAVLLVFANKQDLPNAMNAAEITDKLGLHSL-RPRHWYIQSTCATSGEGLYEGLDWLSNNLANK 487
            I++LGLD AGKTT+LY+L+  E V T+PT GFN E ++      K ++F  WDVGGQ+K+RPLW+ Y + T G++FVVDS D +R+ EA+ ELH++    E +   +L+ ANKQDL N+++ +EI   L +  L     W++Q TCA  G+GL EGL+ L + +  +
Sbjct:   23 IVILGLDCAGKTTVLYRLQFNEFVNTVPTKGFNTEKIKVTLGNSKTVTFHFWDVGGQEKLRPLWKSYTRCTDGIVFVVDSVDVERMEEAKTELHKITRISENQGVPVLIVANKQDLRNSLSLSEIEKLLAMGELSSSTPWHLQPTCAIIGDGLKEGLEKLHDMIIKR 189          
BLAST of DY259959 vs. ExPASy Swiss-Prot
Match: ARL4A_BOVIN (ADP-ribosylation factor-like protein 4A OS=Bos taurus GN=ARL4A PE=2 SV=1)

HSP 1 Score: 150.599 bits (379), Expect = 1.529e-35
Identity = 75/167 (44.91%), Postives = 111/167 (66.47%), Query Frame = 2
Query:    5 ILMLGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEY-----KNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRVVEARDELHRMLNEDELRDAVLLVFANKQDLPNAMNAAEITDKLGLHSL-RPRHWYIQSTCATSGEGLYEGLDWLSNNLANK 487
            I++LGLD AGKTT+LY+L+  E V T+PT GFN E ++      K ++F  WDVGGQ+K+RPLW+ Y + T G++FVVDS D +R+ EA+ ELH++    E +   +L+ ANKQDL N+++ +EI   L +  L     W++Q TCA  G+GL EGL+ L + +  +
Sbjct:   23 IVILGLDCAGKTTVLYRLQFNEFVNTVPTKGFNTEKIKVTLGNSKTVTFHFWDVGGQEKLRPLWKSYTRCTDGIVFVVDSVDVERMEEAKTELHKITRISENQGVPVLIVANKQDLRNSLSLSEIEKLLAMGELSSSTPWHLQPTCAIIGDGLKEGLEKLHDMIIKR 189          
BLAST of DY259959 vs. ExPASy Swiss-Prot
Match: ARL14_MOUSE (ADP-ribosylation factor-like protein 14 OS=Mus musculus GN=Arl14 PE=2 SV=1)

HSP 1 Score: 149.828 bits (377), Expect = 2.608e-35
Identity = 75/161 (46.58%), Postives = 113/161 (70.19%), Query Frame = 2
Query:    5 ILMLGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYK-NISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVD-SNDRDRVVEARDELHRMLNEDELRDAVLLVFANKQDLPNAMNAAEITDKLGLHSL-RPRHWYIQSTCATSGEGLYEGLDWLSNNL 478
            IL+LGLD+AGK+T+LY+LK  E + TIPTIGFNVE V+ + +++ TVWDVGGQ+K+R +W  Y +N QGL++VVD S  + R+ ++R E   +L  + +++  +++ ANKQDLP A++A +IT    +  L   R+WY+Q  CA +GEGL +G   L+  L
Sbjct:   16 ILLLGLDSAGKSTLLYRLKFAETLATIPTIGFNVEMVQLQSSLTLTVWDVGGQEKMRTVWDCYCENAQGLMYVVDCSEGKKRLEDSRKEFKHILKNEHIKNTPVVILANKQDLPGALSAEDITRMFKVKKLCSNRNWYVQPCCAVTGEGLDDGFRKLTEFL 176          
BLAST of DY259959 vs. ExPASy Swiss-Prot
Match: ARL4D_MOUSE (ADP-ribosylation factor-like protein 4D OS=Mus musculus GN=Arl4d PE=2 SV=1)

HSP 1 Score: 142.895 bits (359), Expect = 3.188e-33
Identity = 72/160 (45.00%), Postives = 107/160 (66.88%), Query Frame = 2
Query:    5 ILMLGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEY-----KNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRVVEARDELHRMLNEDELRDAVLLVFANKQDLPNAMNAAEITDKLGLHSLRPRH-WYIQSTCATSGEGLYEGLDWL 466
            ++++GLD+AGKT++LY+LK  E V ++PT GFN E +       + I+F VWDVGGQ+K+RPLWR Y + T GL+FVVDS + +R+ EA+ ELHR+    + +   +LV ANKQD P A++AAE+  +L +  L      ++Q+  A  G GL +GL+ L
Sbjct:   24 VVVIGLDSAGKTSLLYRLKFKEFVQSVPTKGFNTEKIRVPLGGSRGITFQVWDVGGQEKLRPLWRSYTRRTDGLVFVVDSAEIERLEEAKVELHRISKASDNQGVPVLVLANKQDQPGALSAAEVEKRLAVRELAAATLTHVQACSAVDGLGLQQGLERL 183          
BLAST of DY259959 vs. ExPASy Swiss-Prot
Match: ARL11_BOVIN (ADP-ribosylation factor-like protein 11 OS=Bos taurus GN=ARL11 PE=2 SV=1)

HSP 1 Score: 142.51 bits (358), Expect = 4.164e-33
Identity = 70/160 (43.75%), Postives = 109/160 (68.12%), Query Frame = 2
Query:    2 RILMLGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYK-NISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRVVEARDELHRMLNEDELRDAVLLVFANKQDLPNAMNAAEITDKLGLHSLRPRHWYIQSTCATSGEGLYEGLDWLSNNL 478
            +++M+GLD+AGKTT+LY+LK  ++V T+PT+GFNVE +E   ++S T+WDVGGQ ++R  W+ + + T  L++V+DS D  R+ EA  EL  +L++  +    LLV ANKQ++P A++  EI D+LGL     R W +++  A +G GL E L+ L + L
Sbjct:   14 QVVMMGLDSAGKTTLLYRLKGYQLVETLPTVGFNVEPLEEPGHVSLTLWDVGGQSQLRASWKDHLEGTDILVYVLDSTDEARLPEAVAELREVLDDPSVASVPLLVLANKQEVPQALSLPEIRDRLGLQGFLGRSWDLRACSALTGAGLPEALESLRSLL 173          
BLAST of DY259959 vs. ExPASy Swiss-Prot
Match: ARL4D_PONAB (ADP-ribosylation factor-like protein 4D OS=Pongo abelii GN=ARL4D PE=2 SV=1)

HSP 1 Score: 142.124 bits (357), Expect = 5.438e-33
Identity = 71/160 (44.38%), Postives = 106/160 (66.25%), Query Frame = 2
Query:    5 ILMLGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEY-----KNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRVVEARDELHRMLNEDELRDAVLLVFANKQDLPNAMNAAEITDKLGLHSLRPRH-WYIQSTCATSGEGLYEGLDWL 466
            ++++GLD+AGKT++LY+LK  E V ++PT GFN E +       + I+F VWDVGGQ+K+RPLWR Y + T GL+FVVD+ + +R+ EA+ ELHR+    + +   +LV ANKQD P A++AAE+  +L +  L      ++Q   A  G GL +GL+ L
Sbjct:   24 VVVIGLDSAGKTSLLYRLKFKEFVQSVPTKGFNTEKIRVPLGGSRGITFQVWDVGGQEKLRPLWRSYTRRTDGLVFVVDAAEAERLEEAKVELHRISRASDNQGVPVLVLANKQDQPGALSAAEVEKRLAVRELAAATLTHVQGCSAVDGLGLQQGLERL 183          
The following BLAST results are available for this feature:
BLAST of DY259959 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 217
Match NameE-valueIdentityDescription
ARF5_ARATH1.383e-3645.45Probable ADP-ribosylation factor At2g18390 OS=Arab... [more]
ARL5C_MOUSE3.081e-3644.52ADP-ribosylation factor-like protein 5C OS=Mus mus... [more]
ARL4A_RAT1.529e-3544.91ADP-ribosylation factor-like protein 4A OS=Rattus ... [more]
ARL4A_MOUSE1.529e-3544.91ADP-ribosylation factor-like protein 4A OS=Mus mus... [more]
ARL4A_HUMAN1.529e-3544.91ADP-ribosylation factor-like protein 4A OS=Homo sa... [more]
ARL4A_BOVIN1.529e-3544.91ADP-ribosylation factor-like protein 4A OS=Bos tau... [more]
ARL14_MOUSE2.608e-3546.58ADP-ribosylation factor-like protein 14 OS=Mus mus... [more]
ARL4D_MOUSE3.188e-3345.00ADP-ribosylation factor-like protein 4D OS=Mus mus... [more]
ARL11_BOVIN4.164e-3343.75ADP-ribosylation factor-like protein 11 OS=Bos tau... [more]
ARL4D_PONAB5.438e-3344.38ADP-ribosylation factor-like protein 4D OS=Pongo a... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAP10YM10FM1 Fruit-TF Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY259959 ID=DY259959; Name=DY259959; organism=Citrus clementina; type=EST; length=1098bp
GAGAATTCTCATGTTAGGTCTCGATGCAGCTGGTAAGACTACTATCCTGT
ACAAGCTTAAGCTCGGAGAGATCGTCACCACCATTCCTACCATTGGATTT
AATGTAGAGACCGTTGAGTATAAGAACATCAGCTTTACTGTCTGGGATGT
CGGGGGTCAAGACAAGATCCGACCTTTGTGGAGACATTATTTCCAAAACA
CCCAAGGACTCATCTTTGTGGTTGACAGTAATGATCGCGACCGTGTGGTA
GAAGCTAGGGATGAGTTGCACAGAATGTTGAATGAGGATGAATTGAGAGA
TGCTGTGCTGCTTGTATTTGCTAACAAGCAAGATCTTCCAAATGCAATGA
ATGCTGCTGAGATAACTGACAAGCTTGGCCTTCACTCTCTTCGCCCGCGC
CACTGGTATATCCAGAGCACATGTGCCACTTCTGGTGAAGGGCTGTATGA
GGGACTTGACTGGCTCTCAAACAACCTTGCAAACAAGGCATACACAACTA
AATTTTGAGTTTTGGGTTGCCCGCACCGCTGAAATACAGAGTTAACCCCA
CTCCTCAAGTGTTCTTGCCCTTTCCTTCCCGCAATACCTTCCTTGCCCCG
TTTTACTGTGTTTGTTGTTTTCCCTTGGCAACCGTTCGAAATTCTGTTTC
TCGTACCCATCCGAATCACTTCCCGAATGGTTTACCCTCCCCTCCCACAA
AAAATAAAACACAACAACTCTCCCCTTTTCCCTCCACAAAGTTCGGTCTT
CCCCCAAAGGCATCGGCCTCTCCCTCTTCTTTGCAACGCAAGTGGCCACC
ACCCGATCACAGAAAGATTCTTTCACTGCCCGTCCGCGTGATACCTCCCT
AACTGTATTCCTATATCCTTGCTGCTATCTCTTCCTCAGCCCTCTCCCGC
CCGATGTCCCTCACGCCCGCGGGTCTCCCTTTTTTCGCCTAGCCTACCTC
CCTTTTCTCTTTCTCTACCACCCCCTCCCCCCTCTCCCTCACACGCCTCC
TCCGCTCTCACGTCCTCACTCTCTCCCGCCCCGTCGTCTCCGCGCAACCC
TCTTTGTGCATATCCGGCCTCATCTCTGTCGCGTGGCAACATTATTCT
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