DY259973
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of DY259973 vs. ExPASy Swiss-Prot
Match: MLP3B_HUMAN (Microtubule-associated proteins 1A/1B light chain 3B OS=Homo sapiens GN=MAP1LC3B PE=1 SV=3) HSP 1 Score: 60.077 bits (144), Expect = 1.234e-14 Identity = 26/81 (32.10%), Postives = 52/81 (64.20%), Query Frame = 3 Query: 75 AKNSFKLEHPLERRQAEAARIRDKYPDRIPVIVERAE-KSDVPEIDKKKYLVPADLTVGQFVYVVRKRIKLTPEKAIFIFV 314 ++ +FK E+R + IR+++P +IPVI+ER + + +P +DK K+LVP + + + + ++R+R++L +A F+ V Sbjct: 3 SEKTFKQRRTFEQRVEDVRLIREQHPTKIPVIIERYKGEKQLPVLDKTKFLVPDHVNMSELIKIIRRRLQLNANQAFFLLV 83 HSP 2 Score: 41.2022 bits (95), Expect = 1.234e-14 Identity = 17/31 (54.84%), Postives = 23/31 (74.19%), Query Frame = 1 Query: 346 MSAIYEENRDEDGFLYMTYSGENTFGIF*SV 438 +S +YE +DEDGFLYM Y+ + TFG+ SV Sbjct: 95 ISEVYESEKDEDGFLYMVYASQETFGMKLSV 125
BLAST of DY259973 vs. ExPASy Swiss-Prot
Match: MLP3A_BOVIN (Microtubule-associated proteins 1A/1B light chain 3A OS=Bos taurus GN=MAP1LC3A PE=2 SV=1) HSP 1 Score: 60.8474 bits (146), Expect = 1.624e-14 Identity = 28/77 (36.36%), Postives = 49/77 (63.64%), Query Frame = 3 Query: 87 FKLEHPLERRQAEAARIRDKYPDRIPVIVERAE-KSDVPEIDKKKYLVPADLTVGQFVYVVRKRIKLTPEKAIFIFV 314 FK R E +IR+++P +IPVI+ER + + +P +DK K+LVP + + + V ++R+R++L P +A F+ V Sbjct: 7 FKQRRSFADRCKEVQQIREQHPSKIPVIIERYKGEKQLPVLDKTKFLVPDHVNMSELVKIIRRRLQLNPTQAFFLLV 83 HSP 2 Score: 40.0466 bits (92), Expect = 1.624e-14 Identity = 15/23 (65.22%), Postives = 19/23 (82.61%), Query Frame = 1 Query: 355 IYEENRDEDGFLYMTYSGENTFG 423 IYE+ +DEDGFLYM Y+ + TFG Sbjct: 98 IYEQEKDEDGFLYMVYASQETFG 120
BLAST of DY259973 vs. ExPASy Swiss-Prot
Match: MP3B2_HUMAN (Microtubule-associated proteins 1A/1B light chain 3 beta 2 OS=Homo sapiens GN=MAP1LC3B2 PE=2 SV=1) HSP 1 Score: 60.077 bits (144), Expect = 1.306e-13 Identity = 26/81 (32.10%), Postives = 52/81 (64.20%), Query Frame = 3 Query: 75 AKNSFKLEHPLERRQAEAARIRDKYPDRIPVIVERAE-KSDVPEIDKKKYLVPADLTVGQFVYVVRKRIKLTPEKAIFIFV 314 ++ +FK E+R + IR+++P +IPVI+ER + + +P +DK K+LVP + + + + ++R+R++L +A F+ V Sbjct: 3 SEKTFKQRRTFEQRVEDVRLIREQHPTKIPVIIERYKGEKQLPVLDKTKFLVPDHVNMSELIKIIRRRLQLNANQAFFLLV 83 HSP 2 Score: 37.7354 bits (86), Expect = 1.306e-13 Identity = 16/31 (51.61%), Postives = 22/31 (70.97%), Query Frame = 1 Query: 346 MSAIYEENRDEDGFLYMTYSGENTFGIF*SV 438 +S +YE +DEDGFLYM + + TFG+ SV Sbjct: 95 ISEVYESEKDEDGFLYMVCASQETFGMKLSV 125 The following BLAST results are available for this feature:
BLAST of DY259973 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 83
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Sequences
The
following sequences are available for this feature:
EST sequence >DY259973 ID=DY259973; Name=DY259973; organism=Citrus clementina; type=EST; length=629bpback to top |