DY259974

Overview
NameDY259974
Unique NameDY259974
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length926
Libraries
Library NameType
Fruit-TFcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY259974 vs. ExPASy Swiss-Prot
Match: TXTP_CAEEL (Putative tricarboxylate transport protein, mitochondrial OS=Caenorhabditis elegans GN=K11H3.3 PE=2 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 3.479e-11
Identity = 47/153 (30.72%), Postives = 80/153 (52.29%), Query Frame = 2
Query:   95 MISGSIAGSVEHM-AMYPVDTLKTR-MQVIGASRPLHPAGVRQAFSSVLKLEGPAGFYRGIAAMGLGAGPAHAVYFSVYELCKEFFSGGVPNNSMAHAVSGVFSTVASDAVI---TPMDMVKQRLQ-LKSSPYKGVPDCVKRVLVEEGIGAFY 535
            ++ G  AG  E + A+ P++T+K + +   G ++P +  G       ++K EG  G Y+G+ A     G   A+ F V E  K+++ GG     ++  + G+   VA  A +   TP+D+VK R+Q L++  YK   DC  ++  +EG  AFY
Sbjct:  125 LLCGLGAGLSEAVFAVTPMETVKVKFIHDQGLAQPKYK-GFVHGVGCIVKAEGLGGIYKGVTATMAKQGSNQAIRFFVMETLKDWYRGGDNTQPISKPIVGLMGAVAGAASVYGNTPIDVVKTRMQGLEAKKYKNTLDCAMQIWKKEGFFAFY 276          
BLAST of DY259974 vs. ExPASy Swiss-Prot
Match: S2540_MOUSE (Solute carrier family 25 member 40 OS=Mus musculus GN=Slc25a40 PE=2 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 3.479e-11
Identity = 45/171 (26.32%), Postives = 84/171 (49.12%), Query Frame = 2
Query:  116 GSVEHMAMYPVDTLKTRMQVIGASRPLHPAGVRQAFSSVLKLEGPAGFYRGIAAMGLGAGPAHAVYFSVYELCKEFFSGGV-PNNSMAHAVSGVFSTVASDAVITPMDMVKQRLQLKSSPYKGVPDCVKRVLVEEGIGAFYASYRTTVIMNAPFQAVHFATYEAVKRALME 625
            G ++HM +   ++ K   +  G  R     G   AF  +L+ EG    + G+    + A PA  +YF+ YE    F    +  N +    V+GV +   +  VI+P+++++ ++Q K   YK +   V   + E+G  + +  +  T++ + PF A+++  YE +KR L E
Sbjct:   62 GLMDHMCVCEEESKKAWYKKPGNFR-----GTLDAFLKILRNEGIKSLWSGLPPTLVMAIPATVIYFTCYEQLSAFLKTKLGENETRIPIVAGVVARFGAVTVISPLELIRTKVQSKKFSYKELYQFVSMRVSEDGWISLWKGWAPTILRDVPFSAMYWYNYENLKRWLCE 227          
BLAST of DY259974 vs. ExPASy Swiss-Prot
Match: UCP2_PIG (Mitochondrial uncoupling protein 2 OS=Sus scrofa GN=UCP2 PE=2 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 4.543e-11
Identity = 67/266 (25.19%), Postives = 108/266 (40.60%), Query Frame = 2
Query:   98 ISGSIAGSVEHMAMYPVDTLKTRMQVIGASR-PLHPA------GVRQAFSSVLKLEGPAGFYRGIAAMGLGAGPAHA-VYFSVYELCKEFFSGGVPNNSM-AHAVSGVFSTVASDAVITPMDMVKQRLQLKSSP-----YKGVPDCVKRVLVEEGIGAFYASYRTTVIMNAPFQAVHFATYEAVKRALMEFDPNSGSDESLVVHXXXXXXXXXXXXXXXXPLDVVKPRCRAGWPWAG*IFKRSIGNGMKPAGGKRNPGAFGRGDPP 853
            +    A  +  +  +P+DT K R+Q+ G  R P+  A      GV     ++++ EGP   Y G+ A GL    + A V   +Y+  K F++ G  +  + +  ++G  +   + AV  P D+VK R Q ++       Y+   D  K +  EEG+   +      V  NA        TY+ +K  L++ D  +   + L  H                P+DVVK R     P        S G+       K  P AF +G  P
Sbjct:   18 LGAGTAACIADLITFPLDTAKVRLQIQGERRGPVQAAASAQYRGVLGTILTMVRNEGPRSLYNGLVA-GLQRQMSFASVRIGLYDSVKHFYTKGSEHAGIGSRLLAGSTTGALAVAVAQPTDVVKVRFQAQARAGGGRRYRSTVDAYKTIAREEGLRGLWKGTSPNVARNAIVNCAELVTYDLIKDTLLKADLMT---DDLPCHFTSAFGAGFCTTVIASPVDVVKTRYMNSAPGQ----YSSAGHCALTMLQKEGPRAFYKGFTP 275          
BLAST of DY259974 vs. ExPASy Swiss-Prot
Match: TXTP_HUMAN (Tricarboxylate transport protein, mitochondrial OS=Homo sapiens GN=SLC25A1 PE=1 SV=2)

HSP 1 Score: 68.9366 bits (167), Expect = 4.543e-11
Identity = 55/239 (23.01%), Postives = 105/239 (43.93%), Query Frame = 2
Query:   41 PSKTKETTIHDGLEFWQFMISGSIAGSVEHMAMYPVDTLKTRMQVIGASRPLHPAGVRQAFSSVLKLEGPAGFYRGIAAMGLGAGPAHAVYFSVYELCKEFFSGGVPN-NSMAHAVSGVFSTVASDAVIT-PMDMVKQR-LQLKSSP---YKGVPDCVKRVLVEEGIGAFYASYRTTVIMNAPFQAVHFATYEAVKRALMEFDPNSGSDESLVVHXXXXXXXXXXXXXXXXPLDVVKPR 739
            P+  K    H G    + +++G +AG +E    +P + +KT++Q+   S P    G+       ++  G  G YRG++++  G+ P  AV F ++E             +S    + G+ + VA   V+  PM+ +K + +  ++SP   Y+G    V+ ++ E+G+   Y     TV+     QA+ F    +++      +PN   +   ++                 PLDV+K R
Sbjct:   15 PASGKAKLTHPG----KAILAGGLAGGIEICITFPTEYVKTQLQLDERSHPPRYRGIGDCVRQTVRSHGVLGLYRGLSSLLYGSIPKAAVRFGMFEFLSNHMRDAQGRLDSTRGLLCGLGAGVAEAVVVVCPMETIKVKFIHDQTSPNPKYRGFFHGVREIVREQGLKGTYQGLTATVLKQGSNQAIRFFVMTSLRNWYRGDNPNKPMNP--LITGVFGAIAGAASVFGNTPLDVIKTR 247          

HSP 2 Score: 68.1662 bits (165), Expect = 7.750e-11
Identity = 49/180 (27.22%), Postives = 86/180 (47.78%), Query Frame = 2
Query:   95 MISGSIAGSVEHMAMY-PVDTLKTRMQVIGASRPLHPAGVRQAFSSVLKLEGPAGFYRGIAAMGLGAGPAHAVYFSVYELCKEFFSGGVPNNSMAHAVSGVFSTVASDAVI---TPMDMVKQRLQ-LKSSPYKGVPDCVKRVLVEEGIGAFYASYRTTVIMNAPFQAVHFATYEAVKRAL 619
            ++ G  AG  E + +  P++T+K +      S      G       +++ +G  G Y+G+ A  L  G   A+ F V    + ++ G  PN  M   ++GVF  +A  A +   TP+D++K R+Q L++  Y+   DC  ++L +EG+ AFY      +       A+ F  Y+ V + L
Sbjct:  125 LLCGLGAGVAEAVVVVCPMETIKVKFIHDQTSPNPKYRGFFHGVREIVREQGLKGTYQGLTATVLKQGSNQAIRFFVMTSLRNWYRGDNPNKPMNPLITGVFGAIAGAASVFGNTPLDVIKTRMQGLEAHKYRNTWDCGLQILKKEGLKAFYKGTVPRLGRVCLDVAIVFVIYDEVVKLL 304          
BLAST of DY259974 vs. ExPASy Swiss-Prot
Match: MPCP_HUMAN (Phosphate carrier protein, mitochondrial OS=Homo sapiens GN=SLC25A3 PE=1 SV=2)

HSP 1 Score: 68.5514 bits (166), Expect = 5.934e-11
Identity = 50/183 (27.32%), Postives = 78/183 (42.62%), Query Frame = 2
Query:   98 ISGSIAGSVEHMAMYPVDTLKTRMQVIGASRPLHPAGVRQAFSSVLKLEGPAGFYRGIAAMGLGAGPAHAVYFSVYELCKEFFSG--GVPNNSM----AHAVSGVFSTVASDAVITPMDMVKQRLQLKSSPYKGVPDCVKRVLVEEGIGAFYASYRTTVIMNAPFQAVHFATYEAVKRALMEF 628
            + G I+    H A+ P+D +K RMQV     P    G+   FS  LK +G  G  +G A   LG        F  YE+ K  +S   G  N  +     +  +   +   +D  + PM+  K R+Q +      + D   ++  EEG+ AFY       +   P+  + FA +E    AL +F
Sbjct:   70 LGGIISCGTTHTALVPLDLVKCRMQV----DPQKYKGIFNGFSVTLKEDGVRGLAKGWAPTFLGYSMQGLCKFGFYEVFKVLYSNMLGEENTYLWRTSLYLAASASAEFFADIALAPMEAAKVRIQTQPGYANTLRDAAPKMYKEEGLKAFYKGVAPLWMRQIPYTMMKFACFERTVEALYKF 248          
BLAST of DY259974 vs. ExPASy Swiss-Prot
Match: TXTP_BOVIN (Tricarboxylate transport protein, mitochondrial OS=Bos taurus GN=SLC25A1 PE=2 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 7.750e-11
Identity = 55/242 (22.73%), Postives = 102/242 (42.15%), Query Frame = 2
Query:   32 SVNPSKTKETTIHDGLEFWQFMISGSIAGSVEHMAMYPVDTLKTRMQVIGASRPLHPAGVRQAFSSVLKLEGPAGFYRGIAAMGLGAGPAHAVYFSVYELCKEFFSGGVPN-NSMAHAVSGVFSTVASDAVIT-PMDMVKQRL---QLKSSP-YKGVPDCVKRVLVEEGIGAFYASYRTTVIMNAPFQAVHFATYEAVKRALMEFDPNSGSDESLVVHXXXXXXXXXXXXXXXXPLDVVKPR 739
            S +P   K    H G    + +++G +AG +E    +P + +KT++Q+   S P    G+       ++  G  G YRG++++  G+ P  AV F  +E             +S    + G+ + V    V+  PM+ +K +    Q  +SP Y+G    V+ ++ E+G+   Y     TV+     Q + F    +++      +PN   +   ++                 PLDV+K R
Sbjct:   12 SASPGSGKAKLTHPG----KAILAGGLAGGIEICITFPTEYVKTQLQLDERSHPPRYRGIGDCVRQTVRSHGLLGLYRGLSSLLYGSIPKAAVRFGTFEFLSNHMRDAQGRLDSTRGLLCGLGAGVPEAVVVVCPMETIKVKFIHDQTSASPKYRGFFHGVREIVREQGLKGTYQGLTATVLKQGSNQGIRFFVMTSLRNWYRGDNPNKPMNP--LITGVFGAIAGAASVFGNTPLDVIKTR 247          
BLAST of DY259974 vs. ExPASy Swiss-Prot
Match: MPCP_MOUSE (Phosphate carrier protein, mitochondrial OS=Mus musculus GN=Slc25a3 PE=1 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 7.750e-11
Identity = 49/181 (27.07%), Postives = 79/181 (43.65%), Query Frame = 2
Query:  104 GSIAGSVEHMAMYPVDTLKTRMQVIGASRPLHPAGVRQAFSSVLKLEGPAGFYRGIAAMGLGAGPAHAVYFSVYELCKEFFSG--GVPNNSM----AHAVSGVFSTVASDAVITPMDMVKQRLQLKSSPYKGVPDCVKRVLVEEGIGAFYASYRTTVIMNAPFQAVHFATYEAVKRALMEF 628
            G ++  + H A+ P+D +K RMQV     P    G+   FS  LK +G  G  +G A   +G        F  YE+ K  +S   G  N  +     +  S   +   +D  + PM+  K R+Q +      + + V ++  EEG+ AFY       +   P+  + FA +E    AL +F
Sbjct:   67 GVLSCGLTHTAVVPLDLVKCRMQV----DPQKYKGIFNGFSITLKEDGVRGLAKGWAPTLIGYSMQGLCKFGFYEVFKALYSNILGEENTYLWRTSLYLASSASAEFFADIALAPMEAAKVRIQTQPGYANTLREAVPKMYKEEGLNAFYKGVAPLWMRQIPYTMMKFACFERTVEALYKF 243          
BLAST of DY259974 vs. ExPASy Swiss-Prot
Match: KMCP1_XENTR (Kidney mitochondrial carrier protein 1 OS=Xenopus tropicalis GN=slc25a30 PE=2 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 7.750e-11
Identity = 47/179 (26.26%), Postives = 80/179 (44.69%), Query Frame = 2
Query:  104 GSIAGSVEHMAMYPVDTLKTRMQVIGASRPLHPAGVRQAFSSVLKLEGPAGFYRGIAAMGLGAGPAHAVYFSVYELCKE--FFSGGVPNNSMAHAVSGVFSTVASDAVITPMDMVKQRLQ-------LKSSPYKGVPDCVKRVLVEEGIGAFYASYRTTVIMNAPFQAVHFATYEAVKR 613
            G ++G V      P D LK RMQ  G+   L   G+   F ++ + EG  G ++G++     A     V   VY++ K+    SG + +    H ++     +A      P+D+V+ R+        + +S YKG  DC+ +    EG  A Y  +    +   P+  + F TYE +K+
Sbjct:  113 GVLSGVVSSCIANPTDVLKIRMQAQGS---LIQGGMIGNFINIYQQEGTRGLWKGVSLTAQRAAIVVGVELPVYDITKKHLILSGLMGDTVYTHFLASFTCGLAGALASNPVDVVRTRMMNQRSIRNVSNSSYKGTLDCLLQTWKNEGFFALYKGFWPNWLRLGPWNIIFFITYEQLKK 288          
The following BLAST results are available for this feature:
BLAST of DY259974 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 168
Match NameE-valueIdentityDescription
TXTP_CAEEL3.479e-1130.72Putative tricarboxylate transport protein, mitocho... [more]
S2540_MOUSE3.479e-1126.32Solute carrier family 25 member 40 OS=Mus musculus... [more]
UCP2_PIG4.543e-1125.19Mitochondrial uncoupling protein 2 OS=Sus scrofa G... [more]
TXTP_HUMAN4.543e-1123.01Tricarboxylate transport protein, mitochondrial OS... [more]
MPCP_HUMAN5.934e-1127.32Phosphate carrier protein, mitochondrial OS=Homo s... [more]
TXTP_BOVIN7.750e-1122.73Tricarboxylate transport protein, mitochondrial OS... [more]
MPCP_MOUSE7.750e-1127.07Phosphate carrier protein, mitochondrial OS=Mus mu... [more]
KMCP1_XENTR7.750e-1126.26Kidney mitochondrial carrier protein 1 OS=Xenopus ... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAP10YN03FM1 Fruit-TF Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY259974 ID=DY259974; Name=DY259974; organism=Citrus clementina; type=EST; length=926bp
ATATCGGACCCCCGATTTCCACCCCGAAATCTCGGTAAACCCCTCCAAAA
CAAAAGAAACAACAATACACGACGGCCTCGAGTTCTGGCAGTTCATGATT
TCCGGGTCCATCGCGGGCTCCGTTGAGCACATGGCCATGTACCCAGTTGA
CACCCTCAAGACCCGCATGCAAGTCATAGGGGCGTCTCGCCCGCTTCATC
CCGCCGGCGTCCGTCAAGCCTTTAGCTCAGTGCTCAAGCTGGAGGGCCCG
GCAGGGTTTTACCGAGGAATTGCAGCTATGGGACTCGGCGCAGGACCCGC
ACACGCTGTTTACTTCTCGGTTTACGAGCTCTGTAAAGAGTTCTTCTCAG
GTGGGGTCCCTAATAACTCAATGGCTCACGCTGTGTCGGGTGTCTTCTCG
ACGGTGGCGAGTGATGCTGTGATTACGCCCATGGATATGGTGAAGCAGAG
GCTTCAGCTCAAGAGCAGTCCATACAAGGGAGTCCCAGACTGTGTCAAGA
GAGTGTTAGTTGAGGAAGGAATCGGCGCGTTTTACGCTTCATATAGGACT
ACGGTGATCATGAACGCGCCGTTTCAAGCAGTTCATTTCGCCACTTATGA
GGCAGTAAAGAGAGCTTTGATGGAATTTGACCCAAACAGTGGGAGTGATG
AGAGTTTAGTGGTTCATGCAACAGCCGGTGCGGCTGCCGGAGCTCTGGCC
GCTACCTTGACAACGCCCCTTGATGTTGTAAAACCCCGTTGCCGTGCCGG
GTGGCCGTGGGCGGGATAGATTTTCAAGCGTTCAATTGGGAATGGCATGA
AACCGGCCGGGGGAAAAAGGAATCCGGGGGCCTTTGGAAGGGGGGACCCC
CCAAAGGCGGTTACGGGTCCGGCCGCCCCCATCTGGGGGGTCAAAAACAA
ACCACCAAAATTCTTTCTTACACCAT
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