DY259981

Overview
NameDY259981
Unique NameDY259981
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length913
Libraries
Library NameType
Fruit-TFcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY259981 vs. ExPASy Swiss-Prot
Match: XDH_RAT (Xanthine dehydrogenase/oxidase OS=Rattus norvegicus GN=Xdh PE=1 SV=3)

HSP 1 Score: 125.946 bits (315), Expect = 3.096e-28
Identity = 85/242 (35.12%), Postives = 128/242 (52.89%), Query Frame = 2
Query:   92 VGGPITKSGAALQASGEAVYVDDIPSPTNCLYGAFIYSTKPLARIKSIEFKSNSIPCGVIALLTFKDIPEGGENIGCKSMFGPEPLFANELTRGAGQAVAFVVADTQKNANRAANLAVINYEMENLEPPILSVEEALKQSSLF--EIFPHWYPKQVGDITKGMDEADQKILSAEIKLGSQYYFYMETQTALAVP-DEDNCMVVYSSTQCPENVHATISRCLGIPPHNVRVITRRLGGRFWWK 808
            VG P+    A +QASGEAVY DDIP   N L    + ST+  A+I SI+        G +  LT +D+P    N     +F  E +FA +     G  +  VVADT ++A RAA    I YE     P I+++++A+  +S +  EI       + GD+ KG  EAD  ++S E+ +G Q +FY+ET   +AVP  E   M ++ STQ      + +++ LG+P + + V  +R+GG F  K
Sbjct:  573 VGRPLPHLAANMQASGEAVYCDDIPRYENELSLRLVTSTRAHAKITSIDTSEAKKVPGFVCFLTAEDVP----NSNATGLFNDETVFAKDEVTCVGHIIGAVVADTPEHAQRAARGVKITYED---LPAIITIQDAINNNSFYGSEI-----KIEKGDLKKGFSEAD-NVVSGELYIGGQEHFYLETNCTIAVPKGEAGEMELFVSTQNTMKTQSFVAKMLGVPDNRIVVRVKRMGGGFGGK 801          
BLAST of DY259981 vs. ExPASy Swiss-Prot
Match: XDH_DICDI (Xanthine dehydrogenase OS=Dictyostelium discoideum GN=xdh PE=3 SV=1)

HSP 1 Score: 125.561 bits (314), Expect = 4.043e-28
Identity = 94/272 (34.56%), Postives = 133/272 (48.90%), Query Frame = 2
Query:    8 YDLSDKNKVPT-----LLSSAKQVVQLSREYYPVGGPITKSGAALQASGEAVYVDDIPSPTNCLYGAFIYSTKPLARIKSIEFKSNSIPCGVIALLTFKDIPEGGENIGCKSMFGPEPLFANELTRGAGQAVAFVVADTQKNANRAANLAVINYEMENLEPPILSVEEALKQSSLFEIFPHWYPKQVGDITKGMDEADQKILSAEIKLGSQYYFYMETQTALAVPDEDNCMVVYSSTQCPENVHATISRCLGIPPHNVRVITRRLGGRFWWK 808
            Y +SDK K  T      LS  +Q  Q   + +P+  PI    A  Q +GEA+YVDD+   +  LY   + S K  A IKS++        GV A  + KDIP  G N  C  +   E +F  +     G  +  +VA+T   A  A+ L  I YE     P I S+E+A+ + S F   P  +  + GD+ KG  E+D  I+  E K+G+Q +FY+E    L +P E   + V SSTQ P    A ++  LGI  + V    +RLGG F  K
Sbjct:  580 YLVSDKEKSATDAYSRPLSFGEQNYQTQPDKHPITQPIKHQSADKQVTGEALYVDDVKMKS--LYAVMVPSLKAHANIKSVDASKALKAPGVKAFFSAKDIP--GIN-DCGPVIHDEEVFVTKTALFHGAPIGCIVAETHIQALEASKLVAIEYEEL---PAITSIEDAISKQSFF---PFTHLLKDGDMEKGWSESDH-IIDGEFKVGAQEHFYLEPNGTLVIPGEGKELTVISSTQNPTKTQAIVASVLGIGQNQVVCKLKRLGGGFGGK 839          
BLAST of DY259981 vs. ExPASy Swiss-Prot
Match: ADO_MACFA (Aldehyde oxidase OS=Macaca fascicularis GN=AOX1 PE=2 SV=1)

HSP 1 Score: 120.939 bits (302), Expect = 9.958e-27
Identity = 86/244 (35.25%), Postives = 129/244 (52.87%), Query Frame = 2
Query:   89 PVGGPITKSGAALQASGEAVYVDDIPSPTNCLYGAFIYSTKPLARIKSIEFKSNSIPCGVIALLTFKDIPEGGENIGCKSMFGPEPLFANELTRGAGQAVAFVVADTQKNANRAANLAVINYEMENLEPPILSVEEALKQSSLFEIFPHWYPKQVGDITKGMDEADQKILSAEIKLGSQYYFYMETQTALAVP-DEDNCMVVYSSTQCPENVHATISRCLGIPPHNVRVITRRLGGRFWWKNFK 817
            P+G PI        A+GEA+Y DD+P     L+  F+ S++  A+I SI+        GV+ ++T + + +   N  C      E   A +     GQ V  V+AD++  A RAA    I Y  ++LEP IL+++EA++ +S FE  P     + G++ +     DQ IL  EI +G Q +FYMETQ+ L VP  ED  M VY STQ P+ +   ++  L +P + V    +R+GG F  K FK
Sbjct:  579 PIGHPIMHLSGVKHATGEAIYCDDMPPVDQELFLTFVTSSRAHAKIVSIDLSEALSMPGVVDVITAEHLSD--VNSFC-FFTEAEEFLATDKVFCVGQLVCAVLADSEVQAKRAAKQVKIVY--QDLEPLILTIKEAIQHNSFFE--PE-RKLEYGNVDEAFKVVDQ-ILEGEIHMGGQEHFYMETQSMLVVPKGEDQEMDVYVSTQFPKYIQDIVASTLKLPANKVMCHVKRVGGAFGGKAFK 813          
BLAST of DY259981 vs. ExPASy Swiss-Prot
Match: ADO_BOVIN (Aldehyde oxidase OS=Bos taurus GN=AOX1 PE=1 SV=2)

HSP 1 Score: 120.939 bits (302), Expect = 9.958e-27
Identity = 90/267 (33.71%), Postives = 138/267 (51.69%), Query Frame = 2
Query:   11 DLSDKNKVPTLLSSAKQVVQLSREYYPVGGPITKSGAALQASGEAVYVDDIPSPTNCLYGAFIYSTKPLARIKSIEFKSNSIPCGVIALLTFKDIPEGGENIGCKSMFGPEPLFANELTRGAGQAVAFVVADTQKNANRAANLAVINYEMENLEPPILSVEEALKQSSLFEIFPHWYPKQVGDITKGMDEADQKILSAEIKLGSQYYFYMETQTALAVP-DEDNCMVVYSSTQCPENVHATISRCLGIPPHNVRVITRRLGGRFWWK 808
            DL  ++   TL      + QLS++  P+G PI        A+GEA+Y DD+P     L+  F+ S++  A+I SI+  +     GV+ +LT + +P  G N     +   + L + +     GQ V  V+AD++  A RAA    I Y  ++LEP IL++EEA++  S FE  P     + G++ +     DQ IL  EI +G Q +FYMETQ+ L VP  ED  + VY S Q P+ +    +  L +  + V    +R+GG F  K
Sbjct:  555 DLHSRHYWSTLKYQNADLKQLSQD--PIGHPIMHLSGIKHATGEAIYCDDMPVVDRELFLTFVTSSRAHAKIVSIDVSAALSLPGVVDILTGEHLP--GINTTFGFLTDADQLLSTDEVSCVGQLVCAVIADSEVQARRAAQQVKIVY--QDLEPVILTIEEAIQNKSFFE--PE-RKLEYGNVDEAFKMVDQ-ILEGEIHMGGQEHFYMETQSMLVVPKGEDREIDVYVSAQFPKYIQDITASVLKVSANKVMCHVKRVGGAFGGK 811          
BLAST of DY259981 vs. ExPASy Swiss-Prot
Match: ADO_MOUSE (Aldehyde oxidase OS=Mus musculus GN=Aox1 PE=2 SV=2)

HSP 1 Score: 119.013 bits (297), Expect = 3.784e-26
Identity = 85/267 (31.84%), Postives = 133/267 (49.81%), Query Frame = 2
Query:   11 DLSDKNKVPTLLSSAKQVVQLSREYYPVGGPITKSGAALQASGEAVYVDDIPSPTNCLYGAFIYSTKPLARIKSIEFKSNSIPCGVIALLTFKDIPEGGENIGCKSMFGPEPLFANELTRGAGQAVAFVVADTQKNANRAANLAVINYEMENLEPPILSVEEALKQSSLFEIFPHWYPKQVGDITKGMDEADQKILSAEIKLGSQYYFYMETQTALAVP-DEDNCMVVYSSTQCPENVHATISRCLGIPPHNVRVITRRLGGRFWWK 808
            DL  K+   TL        QL ++  P+G PI        A+GEA+Y DD+P+    L+  F+ S++  A+I SI+        GV+ ++T   + E        + FG E   A +     G  V  V+AD++  A +AA    + Y  ++L P IL++EEA++  S F+        + G++ +     DQ IL  EI +G Q +FYMETQ+ L VP  ED  + +Y STQ P+ +   ++  L +  + V    RR+GG F  K
Sbjct:  554 DLHSKHPWRTLTHQNVDPAQLPQD--PIGRPIMHLSGIKHATGEAIYCDDMPAVDRELFLTFVTSSRAHAKIVSIDLSEALSLPGVVDIITADHLQEA-------NTFGTETFLATDEVHCVGHLVCAVIADSETRAKQAAKQVKVVY--QDLAPLILTIEEAIQHKSFFK---SERKLECGNVDEAFKIVDQ-ILEGEIHIGGQEHFYMETQSMLVVPKGEDGEIDIYVSTQFPKYIQDIVAATLKLSANKVMCHVRRVGGAFGGK 805          
BLAST of DY259981 vs. ExPASy Swiss-Prot
Match: ADO_HUMAN (Aldehyde oxidase OS=Homo sapiens GN=AOX1 PE=2 SV=2)

HSP 1 Score: 117.472 bits (293), Expect = 1.101e-25
Identity = 85/244 (34.84%), Postives = 128/244 (52.46%), Query Frame = 2
Query:   89 PVGGPITKSGAALQASGEAVYVDDIPSPTNCLYGAFIYSTKPLARIKSIEFKSNSIPCGVIALLTFKDIPEGGENIGCKSMFGPEPLFANELTRGAGQAVAFVVADTQKNANRAANLAVINYEMENLEPPILSVEEALKQSSLFEIFPHWYPKQVGDITKGMDEADQKILSAEIKLGSQYYFYMETQTALAVP-DEDNCMVVYSSTQCPENVHATISRCLGIPPHNVRVITRRLGGRFWWKNFK 817
            P+G PI        A+GEA+Y DD+P     L+  F+ S++  A+I SI+        GV+ ++T + + +   N  C      E   A +     GQ V  V+AD++  A RAA    I Y  ++LEP IL++EE+++ +S F+  P     + G++ +     DQ IL  EI +G Q +FYMETQ+ L VP  ED  M VY STQ P+ +   ++  L +P + V    RR+GG F  K  K
Sbjct:  579 PIGHPIMHLSGVKHATGEAIYCDDMPLVDQELFLTFVTSSRAHAKIVSIDLSEALSMPGVVDIMTAEHLSD--VNSFC-FFTEAEKFLATDKVFCVGQLVCAVLADSEVQAKRAAKRVKIVY--QDLEPLILTIEESIQHNSSFK--PE-RKLEYGNVDEAFKVVDQ-ILEGEIHMGGQEHFYMETQSMLVVPKGEDQEMDVYVSTQFPKYIQDIVASTLKLPANKVMCHVRRVGGAFGGKVLK 813          
BLAST of DY259981 vs. ExPASy Swiss-Prot
Match: XDH_EMENI (Xanthine dehydrogenase OS=Emericella nidulans GN=hxA PE=2 SV=2)

HSP 1 Score: 116.701 bits (291), Expect = 1.878e-25
Identity = 82/235 (34.89%), Postives = 120/235 (51.06%), Query Frame = 2
Query:  119 AALQASGEAVYVDDIPSPTNCLYGAFIYSTKPLARIKSIEFKSNSIPCGVIALLTFKDIPEGGEN----IGCKSMFGPEPLFANELTRGAGQAVAFVVADTQKNANRAANLAVINYEMENLEPPILSVEEALKQSSLFEIFPHWYPKQVGDITKGMDEADQKILSAEIKLGSQYYFYMETQTALAVPD-EDNCMVVYSSTQCPENVHATISRCLGIPPHNVRVITRRLGGRFWWK 808
            A  QA+GEA Y DDIP+  N LYG  + STK  A++ S+  ++     GVI  +  KD+P    N      C  +F     FA +    AGQ +  ++A+T K A   A    + YE     P ILS+EEA++  S FE F   Y K  GD      +AD  +     ++G Q +FY+ETQ  +A+P  ED  M ++SSTQ P    + +++  G+  + +    +RLGG F  K
Sbjct:  610 ALKQATGEAQYTDDIPAQKNELYGCMVLSTKAHAKLLSVNTEAALEIPGVIDYVDHKDLPSPRANWWGAPNCDEVF-----FAVDKVTTAGQPIGMILANTAKAAEEGARAVKVEYEE---LPVILSIEEAIEAQSFFERFR--YIKN-GDPESAFRDADH-VFEGVSRMGGQEHFYLETQACVAIPKAEDGEMEIWSSTQNPTETQSYVAQVTGVAANKIVSRVKRLGGGFGGK 832          
BLAST of DY259981 vs. ExPASy Swiss-Prot
Match: XDHD_BACSU (Probable xanthine dehydrogenase subunit D OS=Bacillus subtilis GN=pucD PE=2 SV=1)

HSP 1 Score: 83.9593 bits (206), Expect = 1.349e-15
Identity = 64/230 (27.83%), Postives = 111/230 (48.26%), Query Frame = 2
Query:  128 QASGEAVYVDDIPSPTNCLYGAFIYSTKPLARIKSI-EFKSNSIPCGVIALLTFKDIPEGGENIGCKSMFGPEPLFANELTRGAGQAVAFVVADTQKNANRAANLAVINY-EMENLEPPILSVEEALKQSSLFEIFPHWYPKQVGDITKGMDEADQKILSAEIKLGSQYYFYMETQTALAVPDEDNCMVVYSSTQCPENVHATISRCLGIPPHNVRVITRRLGGRFWWKN 811
            + +GE  Y+ D+  P   LYG  + S  P A I S+   K+  +  GV A++T KD+P G    G   +   +P+   +  R  G A+A V A+T++ A  A  L  + Y E+E ++ P  ++    ++        H      GD+ +G   +D  +     +L  Q + YMET+  +AVP++D    +Y+ TQ        ++R   IP   +R+++  +GG F  K+
Sbjct:   16 KVTGELKYMTDLSFP-GMLYGKVLRSAYPHAEIVSVCTIKAEKME-GVQAVVTHKDVP-GLNRFGI--VIPDQPVLCEDRVRYVGDAIAAVAAETEEIAEAALELIQVEYKELEVMDSPEKALRPNAQRLHEDGNILHRAFFSNGDVEEGFQASDT-VFEETYELPRQMHTYMETEGGVAVPEDDGGFTMYAGTQHGYKDRFQLARIFDIPEEKIRIVSSPMGGSFGGKD 239          
The following BLAST results are available for this feature:
BLAST of DY259981 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 28
Match NameE-valueIdentityDescription
XDH_RAT3.096e-2835.12Xanthine dehydrogenase/oxidase OS=Rattus norvegicu... [more]
XDH_DICDI4.043e-2834.56Xanthine dehydrogenase OS=Dictyostelium discoideum... [more]
ADO_MACFA9.958e-2735.25Aldehyde oxidase OS=Macaca fascicularis GN=AOX1 PE... [more]
ADO_BOVIN9.958e-2733.71Aldehyde oxidase OS=Bos taurus GN=AOX1 PE=1 SV=2[more]
ADO_MOUSE3.784e-2631.84Aldehyde oxidase OS=Mus musculus GN=Aox1 PE=2 SV=2[more]
ADO_HUMAN1.101e-2534.84Aldehyde oxidase OS=Homo sapiens GN=AOX1 PE=2 SV=2[more]
XDH_EMENI1.878e-2534.89Xanthine dehydrogenase OS=Emericella nidulans GN=h... [more]
XDHD_BACSU1.349e-1527.83Probable xanthine dehydrogenase subunit D OS=Bacil... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAP10YN11FM1 Fruit-TF Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY259981 ID=DY259981; Name=DY259981; organism=Citrus clementina; type=EST; length=913bp
ACAATATTATGACCTGTCTGATAAAAATAAGGTCCCAACCTTGTTATCAT
CTGCTAAACAGGTGGTGCAGTTAAGTCGAGAATATTATCCAGTTGGTGGG
CCGATTACTAAATCTGGAGCTGCTTTACAAGCTTCTGGTGAGGCAGTTTA
TGTGGATGACATCCCTTCTCCAACTAATTGCCTATATGGAGCATTCATTT
ATAGCACAAAGCCTTTGGCACGAATAAAGAGCATAGAATTCAAGTCTAAT
TCAATACCTTGTGGAGTGATTGCACTTTTGACTTTCAAAGACATTCCTGA
AGGGGGGGAGAATATAGGTTGTAAATCCATGTTTGGTCCTGAACCCCTAT
TTGCGAATGAGCTTACTCGTGGTGCTGGTCAGGCTGTTGCCTTTGTGGTT
GCAGATACACAGAAAAATGCAAACAGGGCTGCAAACCTTGCAGTGATCAA
TTATGAAATGGAAAATCTAGAACCGCCCATACTATCTGTAGAAGAAGCCC
TCAAGCAATCTAGCCTTTTTGAGATCTTTCCTCACTGGTACCCCAAACAG
GTTGGCGACATAACAAAAGGAATGGATGAAGCAGATCAAAAAATTCTCTC
AGCTGAGATTAAACTCGGTTCACAATATTATTTTTATATGGAGACGCAAA
CAGCCCTTGCTGTGCCAGATGAAGACAACTGCATGGTGGTCTACAGTTCA
ACTCAATGCCCTGAGAATGTTCATGCTACAATTTCGAGATGTCTTGGTAT
TCCCCCACATAATGTCCGTGTGATTACAAGAAGGCTGGGGGGGAGGTTTT
GGTGGAAAAATTTTAAAATCCAGGCCCGTTGCCACAGCCTGGGCCCTTTC
CGCCTACAAGTTAGGCCCCCCAGTCCAGAAATATGTCCATCCCCCAAACT
GAAATGATTATGA
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