DY259988
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DY259988 vs. ExPASy Swiss-Prot
Match: GLGC_ERWCT (Glucose-1-phosphate adenylyltransferase OS=Erwinia carotovora subsp. atroseptica GN=glgC PE=3 SV=1) HSP 1 Score: 121.324 bits (303), Expect = 9.088e-27 Identity = 79/294 (26.87%), Postives = 141/294 (47.96%), Query Frame = 1 Query: 19 VLILSGDHLYRMDYMDFVQNHRQSGADITISCLPMDDRRASDFGLMKINNEGRVPSFSEKPKGKDLKAMAVDTTVLGLSKQEAEEKPYIASMGVYLFKKEILLNLL---RWRFPTANDFGSEIIPASANEQFLKAYLF-----------NDYWEDIGTIRSFFEANLALTAHPPMFSFYDATKPIYTSRRNLPP------XXXXXXXXXXXXXXHGSFITSSFIEHSVVGIRSRINANVHLKDTMMPGADLYETDAEVASLQPEGRVPVGIGENTKIKECILDKNARIGKNVII 840 ++IL+GDH+Y+MDY + +H + GA+ T++CLP+ AS FG+M ++ + R+ F+EKP D D + L ASMG+Y+F + L LL R +A+DFG ++IP +++ A+ F + YW D+GT+ +++ ANL L + P YD PI ++ +LPP G ++ S + HSV+ R R+N+ + T+ + P+ V +G + +++ C++D+ + + ++I Sbjct: 136 MVILAGDHIYKMDYSRMLIDHVEKGAECTVACLPVPLEEASAFGVMSVDKQHRILDFAEKP---DNPTPMPDNPDMAL-----------ASMGIYVFNADYLYQLLETDRNASDSAHDFGQDLIPKIVSQRLAWAHPFTLSCVTSGEDEHQYWRDVGTLEAYWRANLDLASVTPELDVYDRHWPIRSAIESLPPAKFVQDRSGSHGMTMNSLVSGGCIVSGSVVTHSVLFPRVRVNSFCSIDSTV---------------ILPD----VNVGRSCRLRRCVIDRACHLPEGMVI 396
BLAST of DY259988 vs. ExPASy Swiss-Prot
Match: GLGC2_PSEA6 (Glucose-1-phosphate adenylyltransferase 2 OS=Pseudoalteromonas atlantica (strain T6c / BAA-1087) GN=glgC2 PE=3 SV=1) HSP 1 Score: 120.939 bits (302), Expect = 1.187e-26 Identity = 83/286 (29.02%), Postives = 136/286 (47.55%), Query Frame = 1 Query: 19 VLILSGDHLYRMDYMDFVQNHRQSGADITISCLPMD-DRRASDFGLMKINNEGRVPSFSEKPKGKDLKAMAVDTTVLGLSKQEAEEKPYIASMGVYLFKKEILLNLLR---WRFPTANDFGSEIIPASANEQFLKAYLFND------YWEDIGTIRSFFEANLALTAHPPMFSFYDATKPIYTSRRNLPPXXXXXXXXXXXXXXHGSFITSSFIEHSVVGIRSRINANVHLKDTMMPGADLYETDAEVASLQPEGRVPVGIGENTKIKECILDKNARIGKNVIIAN 846 V+ILSGDH+Y MDY + + +H +SGA +T+SC+P+ + A FG+M ++ + R+ F EKP+ + + +ASMG Y+F E L L+ + DFG +IIP+ + + AY F++ YW D+GT+ SF+ AN+ L + P + YD PI+T + LPP S ++ I +S +NVH+ ++ E + L P+ V I N KIK+ I+D+ + + +I + Sbjct: 131 VMILSGDHIYSMDYANILAHHVESGAKMTVSCMPVPIEEAAGAFGVMSVDEDYRILGFEEKPENP--------------TPLPNDPTRCLASMGNYVFDTEFLFEHLKHDAQNEGSERDFGKDIIPSIIKDHPVFAYPFSNDDGEVSYWRDVGTLDSFWLANMELVSPKPPLNLYDKKWPIWTYQEQLPPAKFVWEEYNRCGAAIDSVVSGGCIISGATVRKSLCFSNVHVHS---------YSEIEESVLLPD----VEIKRNCKIKKAIIDRGCIVPEGTVIGH 389
BLAST of DY259988 vs. ExPASy Swiss-Prot
Match: GLGC_THICR (Glucose-1-phosphate adenylyltransferase OS=Thiomicrospira crunogena (strain XCL-2) GN=glgC PE=3 SV=1) HSP 1 Score: 120.553 bits (301), Expect = 1.550e-26 Identity = 82/291 (28.18%), Postives = 132/291 (45.36%), Query Frame = 1 Query: 13 DDVLILSGDHLYRMDYMDFVQNHRQSGADITISCLPMDDRRASDFGLMKINNEGRVPSFSEKPKGKDLKAMAVDTTVLGLSKQEAEEKPYIASMGVYLFKKEILLNLLRWRFPTAN---DFGSEIIPASANEQFLKAYLFND------YWEDIGTIRSFFEANLALTAHPPMFSFYDATKPIYTSRRNLPP------XXXXXXXXXXXXXXHGSFITSSFIEHSVVGIRSRINANVHLKDTMMPGADLYETDAEVASLQPEGRVPVGIGENTKIKECILDKNARIGKNVII 840 D VL+L GDH+Y MDY + H +SGAD+TI C+ + A+ FG+M ++ ++ F+EKP D D +ASMG+Y+F E L L N DFG +IIP+ + ++A+ F D YW D+GTI S+++A+L L + P + YD PI+T + +PP G I+ + I+ SV+ +++ +KD++ L P V + N +I+ ++DK I + +I Sbjct: 130 DYVLVLGGDHIYSMDYSKMLYEHAESGADVTIGCIEVPRMEATGFGVMSVDECFKITKFTEKPANPDAMPHKPDKA--------------LASMGIYVFSTEFLFQKLIEDADNPNSSRDFGKDIIPSIIEDWQVRAFPFEDETGLPVYWRDVGTIESYWKASLDLCSITPDLNLYDEDWPIWTYQAQMPPAKFIFDDEGRRGEAIDSLVAGGCIISGARIKRSVISSGGHVHSFCLVKDSV---------------LLPR----VKVERNCRIQNAVIDKGCVIPEGTVI 387
BLAST of DY259988 vs. ExPASy Swiss-Prot
Match: GLGC_ACIBL (Glucose-1-phosphate adenylyltransferase OS=Acidobacteria bacterium (strain Ellin345) GN=glgC PE=3 SV=1) HSP 1 Score: 120.553 bits (301), Expect = 1.550e-26 Identity = 77/290 (26.55%), Postives = 135/290 (46.55%), Query Frame = 1 Query: 19 VLILSGDHLYRMDYMDFVQNHRQSGADITISCLPMDDRRASDFGLMKINNEGRVPSFSEKPKGKDLKAMAVDTTVLGLSKQEAEEKPYIASMGVYLFKKEILLNLLRWRFPTAN---DFGSEIIPASANEQFLKAYLFND-------YWEDIGTIRSFFEANLALTAHPPMFSFYDATKPIYTSRRNLPP------XXXXXXXXXXXXXXHGSFITSSFIEHSVVGIRSRINANVHLKDTMMPGADLYETDAEVASLQPEGRVPVGIGENTKIKECILDKNARIGKNVII 840 VLILSGDH+Y+M+Y ++ H+ SGAD+T++ + +D FG++ ++N+ V F EKPK +L++ + ASMG+Y+F ++L+ +L N DFG I+P E + ++ F D YW D+GT+ ++++ANL L + P+F+ YD PI T +R PP G ++ + + V+ R+N+ E D+ + V +G + +I+ I+D++ I + +I Sbjct: 120 VLILSGDHIYKMNYDLMMRQHKDSGADVTLATILIDPSETRHFGVVDVDNQSHVNGFVEKPKSTELRS-------------PYDPSKVSASMGIYIFNTDVLIPVLLKDAEDPNSKHDFGHNILPKMVGEYKIYSFNFIDENKKEALYWRDVGTLDAYYDANLDLVSVAPVFNLYDKAWPIRTHQRQYPPAKFVFAEQGRMGTALDSVVSMGCIVSGGTVRNCVLSPDVRVNS-------------FSEVDSSILFSH------VNVGRHCRIRRSIIDRDVHIPEGTVI 377
BLAST of DY259988 vs. ExPASy Swiss-Prot
Match: GLGC_THENN (Glucose-1-phosphate adenylyltransferase OS=Thermotoga neapolitana (strain ATCC 49049 / DSM 4359 / NS-E) GN=glgC PE=3 SV=1) HSP 1 Score: 120.168 bits (300), Expect = 2.025e-26 Identity = 83/277 (29.96%), Postives = 129/277 (46.57%), Query Frame = 1 Query: 19 VLILSGDHLYRMDYMDFVQNHRQSGADITISCLPMDDRRASDFGLMKINNEGRVPSFSEKPKGKDLKAMAVDTTVLGLSKQEAEEKPYIASMGVYLFKKEILLNLL---RWRFPTANDFGSEIIP--ASANEQFLKAYLFNDYWEDIGTIRSFFEANLALTAHPPMFSFYDATKPIYTSRRNLPPXXXXXXXXXXXXXXHGSFITSSFIEHSVVGIRSRINANVHLKDTMMPGADLYETDAEVASLQPEGRVPVGIGENTKIKECILDKNARIGKNV 834 VL+LSGDH+Y M+Y D + H GAD TI+C+ + AS FG+M + EGR+ F EKP + + +AS+G+Y+F E L +L +++DFG ++IP N+ L A+ F+ YW D+GTIRS++EANL L P F+ YD +T +PP + +SV+ RI +K++++ + T+ IGEN ++ I+ +N +IG NV Sbjct: 120 VLVLSGDHVYAMNYNDLIDYHLLKGADGTIACMEVPLEEASRFGIMITDVEGRIVDFEEKP---------------------PKPRSNLASLGIYVFNYEFLKRVLIEDENDPNSSHDFGKDVIPKILRENKGSLYAFRFDGYWRDVGTIRSYWEANLELVLPVPPFNLYDPNWRFFTHSEEMPPAYVAPEARTSTSLISEGAEVYGEVTNSVIFQGVRIGKGTVVKNSVI----MTRTE---------------IGENCYLENVIVAENVKIGNNV 356
BLAST of DY259988 vs. ExPASy Swiss-Prot
Match: GLGC_SHEB5 (Glucose-1-phosphate adenylyltransferase OS=Shewanella baltica (strain OS155 / ATCC BAA-1091) GN=glgC PE=3 SV=1) HSP 1 Score: 120.168 bits (300), Expect = 2.025e-26 Identity = 70/191 (36.65%), Postives = 101/191 (52.88%), Query Frame = 1 Query: 19 VLILSGDHLYRMDYMDFVQNHRQSGADITISCLPMD-DRRASDFGLMKINNEGRVPSFSEKPKGKDLKAMAVDTTVLGLSKQEAEEKPYIASMGVYLFKKEILLNLLR---WRFPTANDFGSEIIPASANEQFLKAYLFND-------YWEDIGTIRSFFEANLALTAHPPMFSFYDATKPIYTSRRNLPP 558 V++LSGDH+YRMDY + H +SGAD+T+SCL + A FG+M+++ E R+ F EKP+ + +ASMG YLF E L + L+ + DFG +IIPA + + AY F YW D+GT+ SF++AN+ L + P + YDA PI+T + LPP Sbjct: 129 VMVLSGDHVYRMDYAGLLAAHAESGADMTVSCLEVPIAEAAGSFGVMEVDEEMRILGFEEKPQQP--------------KHSPGNPEMCLASMGNYLFNTEFLFDQLKKDALNESSDRDFGKDIIPAIIEKHNVFAYPFKSAFPNEQAYWRDVGTLDSFWQANMELLSPTPALNLYDAKWPIWTFQEQLPP 305
BLAST of DY259988 vs. ExPASy Swiss-Prot
Match: GLGC_ALTMD (Glucose-1-phosphate adenylyltransferase OS=Alteromonas macleodii (strain DSM 17117 / Deep ecotype) GN=glgC PE=3 SV=1) HSP 1 Score: 120.168 bits (300), Expect = 2.025e-26 Identity = 72/190 (37.89%), Postives = 101/190 (53.16%), Query Frame = 1 Query: 19 VLILSGDHLYRMDYMDFVQNHRQSGADITISCLPMD-DRRASDFGLMKINNEGRVPSFSEKPKGKDLKAMAVDTTVLGLSKQEAEEKPYIASMGVYLFKKEILLNLLRW---RFPTANDFGSEIIPASANEQFLKAYLF------NDYWEDIGTIRSFFEANLALTAHPPMFSFYDATKPIYTSRRNLPP 558 V+ILSGDH+YRMDY D + H++SGA +T+SC+ + + A FG+M ++ R+ F EKP + D T +ASMG Y+F E L LR + DFG +IIP+ + + AY F N YW D+GTI SF+EAN+ + A P + YD PI+T + LPP Sbjct: 131 VMILSGDHIYRMDYGDMLAKHKESGAKMTVSCMSVPLEEAAGAFGVMSVDENYRINGFEEKPANPT--PLPNDPTRC------------LASMGNYVFDTEFLFEQLRVDSENMGSQRDFGKDIIPSIIADHPVYAYPFEQSGGDNAYWRDVGTIDSFWEANMEMVAPVPQLNLYDRKWPIWTYQEQLPP 306
BLAST of DY259988 vs. ExPASy Swiss-Prot
Match: GLGC_SHEAM (Glucose-1-phosphate adenylyltransferase OS=Shewanella amazonensis (strain ATCC BAA-1098 / SB2B) GN=glgC PE=3 SV=1) HSP 1 Score: 119.783 bits (299), Expect = 2.644e-26 Identity = 87/288 (30.21%), Postives = 135/288 (46.88%), Query Frame = 1 Query: 19 VLILSGDHLYRMDYMDFVQNHRQSGADITISC--LPMDDRRASDFGLMKINNEGRVPSFSEKPKGKDLKAMAVDTTVLGLSKQEAEEKPYIASMGVYLFKKEILLNLLRW---RFPTANDFGSEIIPASANEQFLKAYLFN-------DYWEDIGTIRSFFEANLALTAHPPMFSFYDATKPIYTSRRNLPPXXXXXXXXXXXXXXHGSFITSSFIEHSVVGIRSRINANVHLKDTMMPGADLYETDAEVASLQPEGRVPVGIGENTKIKECILDKNARIGKNVIIAN 846 V+ILSGDH+YRMDY + H QSGAD+T+ C +P+ + A FG+M++ + RV F EKP S + + +ASMG Y+F E L + LR + DFG +IIP+ E + AY F DYW D+GT+ +F++AN+ L + P + YDA PI+T + LPP S ++ I RS + V + ++ E A + P+ V + N ++K I+D+ I + ++I + Sbjct: 131 VMILSGDHVYRMDYAGMLAAHAQSGADMTVCCQEVPVAEA-AGSFGVMEVAEDMRVVGFEEKPANP--------------SCLPHDPERCLASMGNYVFNTEFLFDQLRKDAENVSSERDFGKDIIPSIIREHKVFAYAFKSGLGAGQDYWRDVGTLDTFWQANMELLSPEPHLNLYDAKWPIWTYQEQLPPAKFVFDDEDRRGMATDSIVSGGCIISGAKVKRSVLFNEVRI---------CSYSEVEGAVILPD----VVVLRNCRLKNVIIDRGCVIPEGMVIGH 390
BLAST of DY259988 vs. ExPASy Swiss-Prot
Match: GLGC_RHOBA (Glucose-1-phosphate adenylyltransferase OS=Rhodopirellula baltica GN=glgC PE=3 SV=1) HSP 1 Score: 119.783 bits (299), Expect = 2.644e-26 Identity = 79/287 (27.53%), Postives = 132/287 (45.99%), Query Frame = 1 Query: 19 VLILSGDHLYRMDYMDFVQNHRQSGADITISCLPMDDRRASDFGLMKINNEGRVPSFSEKPKGKDLKAMAVDTTVLGLSKQEAEEKPYIASMGVYLFKKEILLNLL---RWRFPTANDFGSEIIPASANEQFLKAYLFND-------YWEDIGTIRSFFEANLALTAHPPMFSFYDATKPIYTSRRNLPP---------XXXXXXXXXXXXXXHGSFITSSFIEHSVVGIRSRINANVHLKDTMMPGADLYETDAEVASLQPEGRVPVGIGENTKIKECILDKNARI 822 V+IL+GDHLY+M+Y V H + GAD+T+ L + A FG+M+++ + R+ F EKP+ + D V +ASMG+Y+F L L + + +DFG IIP + + + A+ F D YW D+GT+ +++EAN+ L P + YD PI + + LPP G+ I+ + SV+G RIN+ ++D++ L++ V +G +++I+ I+DK +I Sbjct: 141 VVILAGDHLYKMNYESMVNFHHRKGADVTVGALRVSREEARQFGVMQVDTDNRLVEFQEKPENP--RPTLDDPDVC------------LASMGIYVFNTRFLFERLCDDATQPDSDHDFGKNIIPGAIEDSQVFAFPFTDENRKRDAYWRDVGTLEAYYEANMDLVGVDPQLNLYDRQWPIRSFQPQLPPPKFVFGSEGRSSRRGEALDSIVCQGAIISGGCVRRSVIGTGCRINSYAQVEDSI-----LFD--------------DVNVGRHSRIRRAIIDKGVQI 394
BLAST of DY259988 vs. ExPASy Swiss-Prot
Match: GLGC_PASMU (Glucose-1-phosphate adenylyltransferase OS=Pasteurella multocida GN=glgC PE=3 SV=1) HSP 1 Score: 119.783 bits (299), Expect = 2.644e-26 Identity = 83/287 (28.92%), Postives = 136/287 (47.39%), Query Frame = 1 Query: 19 VLILSGDHLYRMDYMDFVQNHRQSGADITISCLPMDDRRASDFGLMKINNEGRVPSFSEKPKGKDLKAMAVDTTVLGLSKQEAEEKPYIASMGVYLFKKEILLNLLRWRFP---TANDFGSEIIPASANEQFLKAYLFND-----------YWEDIGTIRSFFEANLALTAHPPMFSFYDATKPIYTSRRNLPPXXXXXXXXXXXXXXH-----GSFITSSFIEHSVVGIRSRINANVHLKDTMMPGADLYETDAEVASLQPEGRVPVGIGENTKIKECILDKNARI 822 +LIL+GDH+Y+ DY + +H SGA T+ C+ ++ +A++FG+M +N +V SF EKP KD AM + +ASMG+Y+F + L ++L T++DFG +I+P + E L A+ F+ YW D+GT+ SF+++N+ L P YD + PI + P + G IT + I +SV+ R +IN + + + P+ V IG+N K+K CI+D+++ I Sbjct: 139 ILILAGDHIYKQDYSQMLLDHIHSGAKCTVGCIEVEREKATEFGVMAVNENLKVKSFVEKP--KDPPAMV------------GKPNTSLASMGIYVFDADYLYDVLEREVSSPYTSHDFGKDILPKALEEGVLYAHPFSRSCMGRNTEGEIYWRDVGTLDSFWQSNIDLVCENPQLDIYDQSWPIRGNPVQTYPSKFFYKKENARPVDNSLISGGCVITDASISYSVLFDRIKINEGSQIDHCV---------------VLPQ----VTIGKNCKLKRCIIDRHSVI 392 The following BLAST results are available for this feature:
BLAST of DY259988 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 310
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Sequences
The
following sequences are available for this feature:
EST sequence >DY259988 ID=DY259988; Name=DY259988; organism=Citrus clementina; type=EST; length=1032bpback to top |