DY259991

Overview
NameDY259991
Unique NameDY259991
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length917
Libraries
Library NameType
Fruit-TFcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY259991 vs. ExPASy Swiss-Prot
Match: HIS7_RHOP2 (Imidazoleglycerol-phosphate dehydratase OS=Rhodopseudomonas palustris (strain HaA2) GN=hisB PE=3 SV=1)

HSP 1 Score: 163.696 bits (413), Expect = 1.347e-39
Identity = 76/167 (45.51%), Postives = 111/167 (66.47%), Query Frame = 3
Query:  312 RIGEVKRVTKETNVSVKINVDGSGVADSSTCIPFLDHMLDQLASHGLFDVHVRATGDIHIDDHHTNEDVGLAIGTALLQALGDRKGINRFGDFTAPLDEALIHVSLDLSGRPHLNYDLQIPTQKVGTYNTQLVEPLFQSLVNTSGMDPSIQQLAGKNSSHIIEATLK 812
            R   +KR TKET++ V +N+DG+GV++++T I F DHMLD LA H   D+ V+A GD+H+D HHT EDVG+A+G A+ QALG+  GI R+     P+DE L  V +D+SGRP L +  + P  K+G ++T+LV   FQ+    +G+   ++ L G+NS HI E+  K
Sbjct:    2 RTATIKRKTKETDIEVTVNLDGAGVSNAATGIGFFDHMLDLLAKHSRIDITVKAVGDLHVDFHHTTEDVGIALGQAVRQALGNMAGIIRYASMLMPMDETLTRVVIDVSGRPFLVFKAEFPRDKIGEFDTELVREWFQAFAMNAGVTLHVETLYGENSHHIAESCFK 168          
BLAST of DY259991 vs. ExPASy Swiss-Prot
Match: HIS7_FRASC (Imidazoleglycerol-phosphate dehydratase OS=Frankia sp. (strain CcI3) GN=hisB PE=3 SV=1)

HSP 1 Score: 163.696 bits (413), Expect = 1.347e-39
Identity = 80/171 (46.78%), Postives = 116/171 (67.84%), Query Frame = 3
Query:  312 RIGEVKRVTKETNVSVKINVDGSGVADSSTCIPFLDHMLDQLASHGLFDVHVRATGDIHIDDHHTNEDVGLAIGTALLQALGDRKGINRFGDFTAPLDEALIHVSLDLSGRP---HLNYDLQIPTQKVGTYNTQLVEPLFQSLVNTSGMDPSIQQLAGKNSSHIIEATLKA 815
            R   ++R T E++V V++++DG+G++ S T +PF DHML QL  HG FD+ VR  GD+HID HHT ED  +A G+AL +ALGD+ GI RFGD T PLDEAL   ++DLSGRP   H+  DL      +GTY+T L   +F+S+  ++ +   ++ L+G+N+ H++EA  KA
Sbjct:    3 RTARIERKTLESDVLVELDLDGTGISSSDTGVPFFDHMLSQLGKHGGFDLTVRTRGDLHIDAHHTVEDTSIAFGSALREALGDKAGIRRFGDATVPLDEALAQAAVDLSGRPYCVHVEPDL---VGMIGTYDTTLTRHIFESITASARLALHVRVLSGRNAHHVVEAQFKA 170          
BLAST of DY259991 vs. ExPASy Swiss-Prot
Match: HIS7_CHLAA (Imidazoleglycerol-phosphate dehydratase OS=Chloroflexus aurantiacus (strain ATCC 29366 / DSM 635 / J-10-fl) GN=hisB PE=3 SV=1)

HSP 1 Score: 157.147 bits (396), Expect = 1.582e-39
Identity = 84/179 (46.93%), Postives = 110/179 (61.45%), Query Frame = 3
Query:  282 ASTSSAVDSGRIGEVKRVTKETNVSVKINVDGSGVADSSTCIPFLDHMLDQLASHGLFDVHVRATGDIHIDDHHTNEDVGLAIGTALLQALGDRKGINRFGDFTAPLDEALIHVSLDLSGRPHLNYDLQIPTQKVGTYNTQLVEPLFQSLVNTSGMDPSIQQLAGKNSSHIIEATLKAF 818
            +  SS V+  R   ++RVT ETN+++ + +DGSG AD  T I FLDHML   A HGLFD+ VRA GD+HID+HHT EDV + +G A+ QALG+R GI R      P+DEAL  V++DL GRP+        T +VG   T LV  LF+S+      +   Q + G+N  H IEA  KAF
Sbjct:    2 SEVSSVVNRIRRATIERVTGETNITLTLTIDGSGQADVQTGIGFLDHMLTLWARHGLFDLQVRAQGDLHIDEHHTAEDVCICLGRAIDQALGERAGIVRTAHSFVPMDEALALVAVDLGGRPYCVVQADFVTMRVGQLGTDLVAHLFESVAFNGRFNLHAQVMYGRNDHHKIEALFKAF 180          

HSP 2 Score: 27.7202 bits (60), Expect = 1.582e-39
Identity = 13/26 (50.00%), Postives = 16/26 (61.54%), Query Frame = 1
Query:  811 KLFARALRKATKLGPRRRGNIPNLKG 888
            K F RAL  AT++  R  G IP+ KG
Sbjct:  178 KAFGRALDAATRIDARLGGTIPSTKG 203          
BLAST of DY259991 vs. ExPASy Swiss-Prot
Match: HIS7_CLOCE (Imidazoleglycerol-phosphate dehydratase OS=Clostridium cellulolyticum (strain ATCC 35319 / DSM 5812 / JCM 6584 / H10) GN=hisB PE=3 SV=1)

HSP 1 Score: 163.31 bits (412), Expect = 1.759e-39
Identity = 83/169 (49.11%), Postives = 109/169 (64.50%), Query Frame = 3
Query:  312 RIGEVKRVTKETNVSVKINVDGSGVADSSTCIPFLDHMLDQLASHGLFDVHVRATGDIHIDDHHTNEDVGLAIGTALLQALGDRKGINRFGDFTAPLDEALIHVSLDLSGRPHLNYDLQIPTQKVGTYNTQLVEPLFQSLVNTSGMDPSIQQLAGKNSSHIIEATLKAF 818
            R G V R TKET ++VKI++DG G   ++T I F DHML     HGL D +    GD+H+D HHT ED G+A+G A+ QALGD+K I R+G    P+DEAL+ VSLDLS RP+L +D Q     VG  +TQ+VE  F+++   +G+   I+ L G N  HIIEA  KAF
Sbjct:    2 REGLVTRNTKETQINVKISLDGKGDCQANTGIGFFDHMLVLFTKHGLMDAYFDVKGDLHVDSHHTIEDTGIAMGLAIRQALGDKKSIRRYGTAYVPMDEALVLVSLDLSDRPYLVFDAQFSQPMVGQMDTQMVEEFFRAVAFNAGITLHIKVLHGSNCHHIIEAMFKAF 170          
BLAST of DY259991 vs. ExPASy Swiss-Prot
Match: HIS7_BACLD (Imidazoleglycerol-phosphate dehydratase OS=Bacillus licheniformis (strain DSM 13 / ATCC 14580) GN=hisB PE=3 SV=1)

HSP 1 Score: 163.31 bits (412), Expect = 1.759e-39
Identity = 75/168 (44.64%), Postives = 108/168 (64.29%), Query Frame = 3
Query:  312 RIGEVKRVTKETNVSVKINVDGSGVADSSTCIPFLDHMLDQLASHGLFDVHVRATGDIHIDDHHTNEDVGLAIGTALLQALGDRKGINRFGDFTAPLDEALIHVSLDLSGRPHLNYDLQIPTQKVGTYNTQLVEPLFQSLVNTSGMDPSIQQLAGKNSSHIIEATLKA 815
            R  E  R T ET++ +  ++DG G AD  T +PF+ HMLD    HG FD+ + A GD+ IDDHHT ED+G+ +G ALL+ALGD++GI R+G    P+DEAL  V++DLS RPHL +  + P++K+GT++T+LV          + M+  +    G N+ H+IEA  KA
Sbjct:    2 RKAERARKTNETDIKLSFHIDGEGKADIQTDVPFMTHMLDLFTKHGQFDLSIEAKGDVEIDDHHTTEDIGICLGQALLEALGDKQGIKRYGSSMVPMDEALAQVAIDLSNRPHLEFRAEFPSRKIGTFDTELVHEFLWKFALEARMNLHVIVHYGTNTHHMIEAIFKA 169          
BLAST of DY259991 vs. ExPASy Swiss-Prot
Match: HIS7_AZOBR (Imidazoleglycerol-phosphate dehydratase OS=Azospirillum brasilense GN=hisB PE=3 SV=1)

HSP 1 Score: 155.606 bits (392), Expect = 2.061e-39
Identity = 74/164 (45.12%), Postives = 107/164 (65.24%), Query Frame = 3
Query:  324 VKRVTKETNVSVKINVDGSGVADSSTCIPFLDHMLDQLASHGLFDVHVRATGDIHIDDHHTNEDVGLAIGTALLQALGDRKGINRFGDFTAPLDEALIHVSLDLSGRPHLNYDLQIPTQKVGTYNTQLVEPLFQSLVNTSGMDPSIQQLAGKNSSHIIEATLKA 815
            ++R T ET + V +N+DG+GV D  T + FLDHML+QL+ H L D+ V A GD+HID HHT E  G+AIG A+ +A+GDRKGI R+G    P+DE L  V+LD S RP+L + +     K+G  +T+L    FQ+    +G+   ++ L G+N+ HI+E+  KA
Sbjct:   14 IERNTTETRIRVAVNLDGTGVYDVKTGVGFLDHMLEQLSRHSLMDLSVAAEGDVHIDAHHTTEHSGIAIGQAVAKAVGDRKGIQRYGHAYVPMDETLTRVALDFSNRPYLIWKVSFSRDKIGDMDTELFREWFQAFAMAAGVTLHVECLYGENNHHIVESCYKA 177          

HSP 2 Score: 28.8758 bits (63), Expect = 2.061e-39
Identity = 12/26 (46.15%), Postives = 17/26 (65.38%), Query Frame = 1
Query:  811 KLFARALRKATKLGPRRRGNIPNLKG 888
            K  ARALR   ++ PR+R  +P+ KG
Sbjct:  176 KALARALRAGIEIDPRKRDAVPSTKG 201          
BLAST of DY259991 vs. ExPASy Swiss-Prot
Match: HIS7_BRAJA (Imidazoleglycerol-phosphate dehydratase OS=Bradyrhizobium japonicum GN=hisB PE=3 SV=1)

HSP 1 Score: 156.377 bits (394), Expect = 2.063e-39
Identity = 75/167 (44.91%), Postives = 106/167 (63.47%), Query Frame = 3
Query:  312 RIGEVKRVTKETNVSVKINVDGSGVADSSTCIPFLDHMLDQLASHGLFDVHVRATGDIHIDDHHTNEDVGLAIGTALLQALGDRKGINRFGDFTAPLDEALIHVSLDLSGRPHLNYDLQIPTQKVGTYNTQLVEPLFQSLVNTSGMDPSIQQLAGKNSSHIIEATLK 812
            R   +KR TKET++ V +N+DG+GV++ +T I F DHMLD LA H   D+ V+A GD+HID HHT ED G+A+G A+ QALG   GI R+     P+DE L  V +D+SGRP L + +  P  K+G ++T+LV   FQ+    + +   ++ L G NS HI E+  K
Sbjct:    2 RTATIKRKTKETDIEVTVNLDGTGVSNIATGIGFFDHMLDLLARHSRIDLTVKAVGDLHIDHHHTTEDTGIALGQAVKQALGTMAGITRYAGVHMPMDETLSRVVIDISGRPVLVFKVDFPRDKIGEFDTELVREWFQAFAMNASVTLHVETLYGDNSHHIAESCFK 168          

HSP 2 Score: 28.1054 bits (61), Expect = 2.063e-39
Identity = 13/26 (50.00%), Postives = 16/26 (61.54%), Query Frame = 1
Query:  811 KLFARALRKATKLGPRRRGNIPNLKG 888
            K  ARALR A  + P+  G IP+ KG
Sbjct:  168 KGLARALRAAVAIDPKAAGEIPSTKG 193          
BLAST of DY259991 vs. ExPASy Swiss-Prot
Match: HIS7_VIBPA (Histidine biosynthesis bifunctional protein hisB OS=Vibrio parahaemolyticus GN=hisB PE=3 SV=1)

HSP 1 Score: 162.925 bits (411), Expect = 2.297e-39
Identity = 83/169 (49.11%), Postives = 112/169 (66.27%), Query Frame = 3
Query:  312 RIGEVKRVTKETNVSVKINVDGSGVADSSTCIPFLDHMLDQLASHGLFDVHVRATGDIHIDDHHTNEDVGLAIGTALLQALGDRKGINRFGDFTAPLDEALIHVSLDLSGRPHLNYDLQIPTQKVGTYNTQLVEPLFQSLVNTSGMDPSIQQLAGKNSSHIIEATLKAF 818
            R+ EV R TKET++ V +N+D  G  D ST + F DHMLDQ+A+HG F +  +  GD+HIDDHHT ED  LA+G AL +ALGD++GI RFG F+ P+DE L   +LDLSGRP+L +D +    +VG  +T++V   F+SL +T      +   AG N  HIIE+  KAF
Sbjct:  169 RVAEVIRTTKETDIKVAVNLDEQGGNDISTGLGFFDHMLDQIATHGGFQMVCKVDGDLHIDDHHTIEDTALALGQALKEALGDKRGIGRFG-FSLPMDECLAQCALDLSGRPYLKFDAKFSRDQVGDLSTEMVVHFFRSLTDTLACTLHLSS-AGDNDHHIIESLFKAF 335          
BLAST of DY259991 vs. ExPASy Swiss-Prot
Match: HIS7_SINMW (Imidazoleglycerol-phosphate dehydratase OS=Sinorhizobium medicae (strain WSM419) GN=hisB PE=3 SV=1)

HSP 1 Score: 162.925 bits (411), Expect = 2.297e-39
Identity = 76/172 (44.19%), Postives = 112/172 (65.12%), Query Frame = 3
Query:  300 VDSGRIGEVKRVTKETNVSVKINVDGSGVADSSTCIPFLDHMLDQLASHGLFDVHVRATGDIHIDDHHTNEDVGLAIGTALLQALGDRKGINRFGDFTAPLDEALIHVSLDLSGRPHLNYDLQIPTQKVGTYNTQLVEPLFQSLVNTSGMDPSIQQLAGKNSSHIIEATLKA 815
            V   R G+V R T ET VSV ++V+G+G +   T + F DHMLDQL+ H L D+ ++A GD+H+DDHHT ED G+AIG AL +ALGDR+GI R+      +DE +   ++D+SGRP L +++     K+GT++T+LV   FQ+L   +G+   +Q + G N+ HI E   K+
Sbjct:    4 VTPSRTGQVSRKTNETAVSVALDVEGTGSSKIVTGVGFFDHMLDQLSRHSLIDMDIKAEGDLHVDDHHTVEDTGIAIGQALAKALGDRRGITRYASIDLAMDETMTRAAVDVSGRPFLVWNVAFTAPKIGTFDTELVREFFQALAQHAGITLHVQNIYGANNHHIAETCFKS 175          
BLAST of DY259991 vs. ExPASy Swiss-Prot
Match: HIS7_CHRSD (Imidazoleglycerol-phosphate dehydratase OS=Chromohalobacter salexigens (strain DSM 3043 / ATCC BAA-138 / NCIMB 13768) GN=hisB PE=3 SV=1)

HSP 1 Score: 162.925 bits (411), Expect = 2.297e-39
Identity = 79/169 (46.75%), Postives = 106/169 (62.72%), Query Frame = 3
Query:  312 RIGEVKRVTKETNVSVKINVDGSGVADSSTCIPFLDHMLDQLASHGLFDVHVRATGDIHIDDHHTNEDVGLAIGTALLQALGDRKGINRFGDFTAPLDEALIHVSLDLSGRPHLNYDLQIPTQKVGTYNTQLVEPLFQSLVNTSGMDPSIQQLAGKNSSHIIEATLKAF 818
            R+  V R T ET + V +N+DG G     T + FLDHMLDQ+A HGL D+ + A GD+HIDDHHT ED+G+ +G A+ QA+GD++GI R+G    PLDEAL  V +D SGRP L+ D++     +G ++TQL    FQ  VN + +   I  L G N+ H  E   KAF
Sbjct:    4 RVATVSRDTHETQIQVHVNLDGQGHFQCETGVAFLDHMLDQVARHGLIDLDIHAKGDLHIDDHHTVEDLGITLGQAVAQAIGDKRGIRRYGHAYVPLDEALSRVVVDFSGRPGLSMDVEFTRASIGRFDTQLFWEFFQGFVNHAQVTLHIDNLKGFNAHHQAETIFKAF 172          
The following BLAST results are available for this feature:
BLAST of DY259991 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
HIS7_RHOP21.347e-3945.51Imidazoleglycerol-phosphate dehydratase OS=Rhodops... [more]
HIS7_FRASC1.347e-3946.78Imidazoleglycerol-phosphate dehydratase OS=Frankia... [more]
HIS7_CHLAA1.582e-3946.93Imidazoleglycerol-phosphate dehydratase OS=Chlorof... [more]
HIS7_CLOCE1.759e-3949.11Imidazoleglycerol-phosphate dehydratase OS=Clostri... [more]
HIS7_BACLD1.759e-3944.64Imidazoleglycerol-phosphate dehydratase OS=Bacillu... [more]
HIS7_AZOBR2.061e-3945.12Imidazoleglycerol-phosphate dehydratase OS=Azospir... [more]
HIS7_BRAJA2.063e-3944.91Imidazoleglycerol-phosphate dehydratase OS=Bradyrh... [more]
HIS7_VIBPA2.297e-3949.11Histidine biosynthesis bifunctional protein hisB O... [more]
HIS7_SINMW2.297e-3944.19Imidazoleglycerol-phosphate dehydratase OS=Sinorhi... [more]
HIS7_CHRSD2.297e-3946.75Imidazoleglycerol-phosphate dehydratase OS=Chromoh... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAP10YN21FM1 Fruit-TF Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY259991 ID=DY259991; Name=DY259991; organism=Citrus clementina; type=EST; length=917bp
GCTGCGTTTTGGCATATAGCCGTGTTGGCGTTGCTACTCTCTCTGCGACA
TTGGAAACGATAGTGTGTAAAATGGAGCTCTCGGTCCCAGCTCGCCTTGT
TCACCTTTCAATCTCGTCCACGTCCTCACGCCGGCTCCTCGTTAAACCAA
AAACCAATCTCTCTCGTAAACTTCTCCCCATCTCCACACAATACTGCTCC
TCAACGCGCCGCATGAACTCCCTCACAACACCACGCGCCTCTCTAAACCC
AGACGGCGACAGCAAACACAACAACGGGTCCGCCTCAACTTCCTCTGCCG
TCGATTCTGGTCGAATTGGGGAAGTGAAAAGAGTCACGAAAGAGACCAAC
GTTTCTGTGAAGATTAACGTCGATGGCTCTGGCGTTGCTGATTCATCCAC
TTGCATTCCCTTCCTAGATCACATGCTTGATCAACTGGCTTCGCACGGGC
TATTTGATGTGCACGTGAGGGCAACCGGAGACATTCACATTGATGATCAT
CATACCAATGAAGACGTTGGGCTTGCCATTGGCACGGCATTGCTGCAAGC
TCTTGGTGATAGGAAAGGAATTAATCGGTTTGGTGATTTTACAGCTCCTC
TTGATGAAGCTTTGATTCATGTTTCATTGGATTTATCTGGACGGCCACAT
TTAAATTATGATTTGCAAATTCCCACACAGAAAGTTGGAACTTACAACAC
TCAATTGGTGGAACCACTTTTCCAATCCTTGGTGAACACTTCTGGGATGG
ACCCTTCCATTCAACAGCTTGCTGGAAAAAATTCCTCTCACATTATTGAG
GCAACCCTCAAAGCTTTTTGCTAGGGCTCTCCGAAAAGCAACAAAATTAG
GACCCCGTCGCCGTGGAAATATACCCAACCTCAAAGGGGGTTCTCCAACA
TCTTGGAATCTCGACGG
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