DY259991

Overview
NameDY259991
Unique NameDY259991
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length917
Libraries
Library NameType
Fruit-TFcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY259991 vs. ExPASy Swiss-Prot
Match: HIS7_STRAW (Imidazoleglycerol-phosphate dehydratase OS=Streptomyces avermitilis GN=hisB PE=3 SV=1)

HSP 1 Score: 162.54 bits (410), Expect = 3.000e-39
Identity = 82/169 (48.52%), Postives = 113/169 (66.86%), Query Frame = 3
Query:  312 RIGEVKRVTKETNVSVKINVDGSGVADSSTCIPFLDHMLDQLASHGLFDVHVRATGDIHIDDHHTNEDVGLAIGTALLQALGDRKGINRFGDFTAPLDEALIHVSLDLSGRPHL-NYDLQIPTQKVGTYNTQLVEPLFQSLVNTSGMDPSIQQLAGKNSSHIIEATLKA 815
            R+G V+R TKET+V V+I++DGSG  D ST + F DHMLDQL  HGLFD+ V+  GD+HID HHT ED  LA+G A  QALGD+ GI RFG+ T PLDE+L  V++DLSGRP+L + + +     +G Y+T +   + +S V  + +   +    G+N+ HI+E   KA
Sbjct:    3 RVGRVERTTKETSVLVEIDLDGSGKVDVSTGVGFYDHMLDQLGRHGLFDLTVKTEGDLHIDSHHTIEDTALALGAAFKQALGDKVGIYRFGNCTVPLDESLAQVTVDLSGRPYLVHTEPENMAPMIGEYDTTMTRHILESFVAQAQIALHVHVPYGRNAHHIVECQFKA 171          
BLAST of DY259991 vs. ExPASy Swiss-Prot
Match: HIS7_RHOPA (Imidazoleglycerol-phosphate dehydratase OS=Rhodopseudomonas palustris GN=hisB PE=3 SV=1)

HSP 1 Score: 162.54 bits (410), Expect = 3.000e-39
Identity = 76/167 (45.51%), Postives = 110/167 (65.87%), Query Frame = 3
Query:  312 RIGEVKRVTKETNVSVKINVDGSGVADSSTCIPFLDHMLDQLASHGLFDVHVRATGDIHIDDHHTNEDVGLAIGTALLQALGDRKGINRFGDFTAPLDEALIHVSLDLSGRPHLNYDLQIPTQKVGTYNTQLVEPLFQSLVNTSGMDPSIQQLAGKNSSHIIEATLK 812
            R   +KR TKET++ V +++DG+GVA+++T I F DHMLD LA H   D+ V+A GD+H+D HHT EDVG+A+G A+ QALG+  GI R+     P+DE L  V +D+SGRP L +    P  K+G ++T+LV   FQ+    +G+   ++ L G+NS HI E+  K
Sbjct:    2 RTATIKRKTKETDIEVTVDLDGTGVANAATGIGFFDHMLDLLAKHSRIDITVKAVGDLHVDFHHTTEDVGIALGQAVKQALGNMAGITRYATVLMPMDETLTRVVIDVSGRPFLVFKADFPRDKIGEFDTELVREWFQAFAMNAGVTLHVETLYGENSHHIAESCFK 168          
BLAST of DY259991 vs. ExPASy Swiss-Prot
Match: HIS7_HALHL (Imidazoleglycerol-phosphate dehydratase OS=Halorhodospira halophila (strain DSM 244 / SL1) GN=hisB PE=3 SV=1)

HSP 1 Score: 162.54 bits (410), Expect = 3.000e-39
Identity = 80/169 (47.34%), Postives = 111/169 (65.68%), Query Frame = 3
Query:  312 RIGEVKRVTKETNVSVKINVDGSGVADSSTCIPFLDHMLDQLASHGLFDVHVRATGDIHIDDHHTNEDVGLAIGTALLQALGDRKGINRFGDFTAPLDEALIHVSLDLSGRPHLNYDLQIPTQKVGTYNTQLVEPLFQSLVNTSGMDPSIQQLAGKNSSHIIEATLKAF 818
            R  EV+R T ET V V +++DG G A+    +PF +HML Q+A HG  D+ V+A GD  IDDHHT EDVG+A+G AL +A GD+ G+ R+G    PLDEAL    LDLSGRP L Y+ ++P   VG ++T+LVE  F++L + + M   +  L G+N+ H++E   KAF
Sbjct:    4 RTAEVERTTGETAVRVWVDLDGEGAAELDCGVPFFEHMLAQVARHGGVDLRVQAKGDTWIDDHHTVEDVGIALGQALARAWGDKAGLTRYGHAYVPLDEALSRAVLDLSGRPGLVYNAELPRAHVGRFDTELVEEFFRALTSHAAMTAHLDVLRGRNAHHMVECLFKAF 172          
BLAST of DY259991 vs. ExPASy Swiss-Prot
Match: HIS7_AGRT5 (Imidazoleglycerol-phosphate dehydratase OS=Agrobacterium tumefaciens (strain C58 / ATCC 33970) GN=hisB PE=3 SV=2)

HSP 1 Score: 162.54 bits (410), Expect = 3.000e-39
Identity = 76/168 (45.24%), Postives = 110/168 (65.48%), Query Frame = 3
Query:  312 RIGEVKRVTKETNVSVKINVDGSGVADSSTCIPFLDHMLDQLASHGLFDVHVRATGDIHIDDHHTNEDVGLAIGTALLQALGDRKGINRFGDFTAPLDEALIHVSLDLSGRPHLNYDLQIPTQKVGTYNTQLVEPLFQSLVNTSGMDPSIQQLAGKNSSHIIEATLKA 815
            R GE+ R T ET+VSV++++DG+G +  ST + F DHMLDQL+ H L D+ +   GD+HIDDHHT ED G+AIG A+ +ALGDR+GI R+      +DE +   ++D+SGRP L +++     K+GT++T+LV   FQ+L   +G+   I    G N+ HI E   KA
Sbjct:    4 RKGEIIRKTNETSVSVRVDIDGTGKSKISTGVGFFDHMLDQLSRHSLIDMDIEVQGDLHIDDHHTVEDTGIAIGQAIAKALGDRRGITRYASLDLAMDETMTKAAVDISGRPFLVWNVNFSAPKIGTFDTELVREFFQALAQNAGITLHILNHYGANNHHIAETCFKA 171          
BLAST of DY259991 vs. ExPASy Swiss-Prot
Match: HIS7_VIBVY (Histidine biosynthesis bifunctional protein hisB OS=Vibrio vulnificus (strain YJ016) GN=hisB PE=3 SV=1)

HSP 1 Score: 162.155 bits (409), Expect = 3.919e-39
Identity = 83/169 (49.11%), Postives = 112/169 (66.27%), Query Frame = 3
Query:  312 RIGEVKRVTKETNVSVKINVDGSGVADSSTCIPFLDHMLDQLASHGLFDVHVRATGDIHIDDHHTNEDVGLAIGTALLQALGDRKGINRFGDFTAPLDEALIHVSLDLSGRPHLNYDLQIPTQKVGTYNTQLVEPLFQSLVNTSGMDPSIQQLAGKNSSHIIEATLKAF 818
            R+ EV R TKET++ V +N+D  G    ST + F DHMLDQ+A+HG F +  +  GD+HIDDHHT ED  LA+G AL +ALGD++GI RFG F+ P+DE L   +LDLSGRP+L +D Q   ++VG  +T++V   F+SL +T      +   AG N  HIIE+  KAF
Sbjct:  169 RVAEVVRTTKETDIKVFVNLDEQGGNAISTGLGFFDHMLDQIATHGGFQMVCKVEGDLHIDDHHTVEDTALALGQALKEALGDKRGIGRFG-FSLPMDECLAQCALDLSGRPYLKFDAQFSREQVGDLSTEMVVHFFRSLTDTLACTLHLSS-AGNNDHHIIESLFKAF 335          
BLAST of DY259991 vs. ExPASy Swiss-Prot
Match: HIS7_VIBVU (Histidine biosynthesis bifunctional protein hisB OS=Vibrio vulnificus GN=hisB PE=3 SV=1)

HSP 1 Score: 162.155 bits (409), Expect = 3.919e-39
Identity = 83/169 (49.11%), Postives = 112/169 (66.27%), Query Frame = 3
Query:  312 RIGEVKRVTKETNVSVKINVDGSGVADSSTCIPFLDHMLDQLASHGLFDVHVRATGDIHIDDHHTNEDVGLAIGTALLQALGDRKGINRFGDFTAPLDEALIHVSLDLSGRPHLNYDLQIPTQKVGTYNTQLVEPLFQSLVNTSGMDPSIQQLAGKNSSHIIEATLKAF 818
            R+ EV R TKET++ V +N+D  G    ST + F DHMLDQ+A+HG F +  +  GD+HIDDHHT ED  LA+G AL +ALGD++GI RFG F+ P+DE L   +LDLSGRP+L +D Q   ++VG  +T++V   F+SL +T      +   AG N  HIIE+  KAF
Sbjct:  169 RVAEVVRTTKETDIKVFVNLDEQGGNAISTGLGFFDHMLDQIATHGGFQMVCKVEGDLHIDDHHTVEDTALALGQALKEALGDKRGIGRFG-FSLPMDECLAQCALDLSGRPYLKFDAQFSREQVGDLSTEMVVHFFRSLTDTLACTLHLSS-AGNNDHHIIESLFKAF 335          
BLAST of DY259991 vs. ExPASy Swiss-Prot
Match: HIS7_THIDA (Imidazoleglycerol-phosphate dehydratase OS=Thiobacillus denitrificans (strain ATCC 25259) GN=hisB PE=3 SV=1)

HSP 1 Score: 162.155 bits (409), Expect = 3.919e-39
Identity = 79/169 (46.75%), Postives = 106/169 (62.72%), Query Frame = 3
Query:  312 RIGEVKRVTKETNVSVKINVDGSGVADSSTCIPFLDHMLDQLASHGLFDVHVRATGDIHIDDHHTNEDVGLAIGTALLQALGDRKGINRFGDFTAPLDEALIHVSLDLSGRPHLNYDLQIPTQKVGTYNTQLVEPLFQSLVNTSGMDPSIQQLAGKNSSHIIEATLKAF 818
            R  +V R T ET ++V +N+DGSG +  +T +PFLDHMLDQ+A HGL D+ + A GD+HID HHT ED G+ +G A  +AL D+KGI R+G    PLDEAL  V +DLSGRP L Y +     ++G ++  L    F+  VN +G+   I  L G N+ H  E   KAF
Sbjct:    2 RTAQVSRNTLETEITVSLNLDGSGTSRLATGVPFLDHMLDQIARHGLIDLDIAAKGDLHIDAHHTVEDTGITLGQAFAKALADKKGIRRYGHAYVPLDEALSRVVIDLSGRPGLEYHVDYTRARIGDFDVDLFLEFFRGFVNHAGVTLHIDNLRGINAHHQAETIFKAF 170          
BLAST of DY259991 vs. ExPASy Swiss-Prot
Match: HIS7_PELPD (Imidazoleglycerol-phosphate dehydratase OS=Pelobacter propionicus (strain DSM 2379) GN=hisB PE=3 SV=1)

HSP 1 Score: 162.155 bits (409), Expect = 3.919e-39
Identity = 76/168 (45.24%), Postives = 107/168 (63.69%), Query Frame = 3
Query:  312 RIGEVKRVTKETNVSVKINVDGSGVADSSTCIPFLDHMLDQLASHGLFDVHVRATGDIHIDDHHTNEDVGLAIGTALLQALGDRKGINRFGDFTAPLDEALIHVSLDLSGRPHLNYDLQIPTQKVGTYNTQLVEPLFQSLVNTSGMDPSIQQLAGKNSSHIIEATLKA 815
            R   ++R T ET + + +N+DG G     + +PFLDHML+  A HGLFD+ + A GD  ID HHT ED+G+ +G A  QAL D++GINR+G  T P+DE L    +D+SGRP+L Y++ +P  KVG ++ +L +  FQ+  N  G++  I  L G N  HIIEA  KA
Sbjct:    3 RTATIERNTSETRIRLTLNIDGRGETSIGSGVPFLDHMLNLFARHGLFDLSLEACGDTQIDFHHTVEDIGIVLGEAFKQALADKQGINRYGQVTVPMDETLASAVVDISGRPYLVYNVDLPKAKVGDFDVELAQEFFQAFANHCGINLHINLLYGDNLHHIIEACFKA 170          
BLAST of DY259991 vs. ExPASy Swiss-Prot
Match: HIS7_MAGSA (Imidazoleglycerol-phosphate dehydratase OS=Magnetospirillum magneticum (strain AMB-1 / ATCC 700264) GN=hisB PE=3 SV=2)

HSP 1 Score: 162.155 bits (409), Expect = 3.919e-39
Identity = 81/168 (48.21%), Postives = 110/168 (65.48%), Query Frame = 3
Query:  312 RIGEVKRVTKETNVSVKINVDGSGVADSSTCIPFLDHMLDQLASHGLFDVHVRATGDIHIDDHHTNEDVGLAIGTALLQALGDRKGINRFGDFTAPLDEALIHVSLDLSGRPHLNYDLQIPTQKVGTYNTQLVEPLFQSLVNTSGMDPSIQQLAGKNSSHIIEATLKA 815
            R   + R T ET++ V +++DGSG    ST + FLDHML+QL+ H L D+ V A GD+HID HHT EDVG+AIG A+ QALGDRKGI R+G    P+DEAL  V+LDLS RP+L + +     K+GT +T+L +  FQ+    +G    ++ L G N  HI+E+  KA
Sbjct:    2 RKAAITRNTNETSIKVAVDLDGSGKYAVSTGVGFLDHMLEQLSRHSLMDLEVDAKGDLHIDAHHTTEDVGIAIGQAVNQALGDRKGICRYGSAYVPMDEALTRVALDLSNRPYLIWKVAFGRDKLGTMDTELFKEWFQAFAQAAGATLHVESLYGDNDHHIVESCFKA 169          
BLAST of DY259991 vs. ExPASy Swiss-Prot
Match: HIS7_CHRVO (Imidazoleglycerol-phosphate dehydratase OS=Chromobacterium violaceum GN=hisB PE=3 SV=1)

HSP 1 Score: 162.155 bits (409), Expect = 3.919e-39
Identity = 80/169 (47.34%), Postives = 105/169 (62.13%), Query Frame = 3
Query:  312 RIGEVKRVTKETNVSVKINVDGSGVADSSTCIPFLDHMLDQLASHGLFDVHVRATGDIHIDDHHTNEDVGLAIGTALLQALGDRKGINRFGDFTAPLDEALIHVSLDLSGRPHLNYDLQIPTQKVGTYNTQLVEPLFQSLVNTSGMDPSIQQLAGKNSSHIIEATLKAF 818
            R   V R T ET ++V +N+DG+GV    T +PFLDHM+DQ+A HGL D+ V+A GD+HID HHT ED+G+ +G A  +A+GD+KGI R+G    PLDEAL  V +DLSGRP L Y++      +G ++  L    F   VN S +   I  L G NS H  E   KAF
Sbjct:    2 RTATVTRNTLETQITVSLNLDGTGVGRFETGVPFLDHMMDQIARHGLIDLDVKAVGDLHIDAHHTVEDIGITLGQAFAKAIGDKKGIRRYGHAYVPLDEALSRVVIDLSGRPGLVYNVDYTRACIGQFDVDLFSEFFHGFVNHSMVTLHIDNLRGHNSHHQAETIFKAF 170          
The following BLAST results are available for this feature:
BLAST of DY259991 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
HIS7_STRAW3.000e-3948.52Imidazoleglycerol-phosphate dehydratase OS=Strepto... [more]
HIS7_RHOPA3.000e-3945.51Imidazoleglycerol-phosphate dehydratase OS=Rhodops... [more]
HIS7_HALHL3.000e-3947.34Imidazoleglycerol-phosphate dehydratase OS=Halorho... [more]
HIS7_AGRT53.000e-3945.24Imidazoleglycerol-phosphate dehydratase OS=Agrobac... [more]
HIS7_VIBVY3.919e-3949.11Histidine biosynthesis bifunctional protein hisB O... [more]
HIS7_VIBVU3.919e-3949.11Histidine biosynthesis bifunctional protein hisB O... [more]
HIS7_THIDA3.919e-3946.75Imidazoleglycerol-phosphate dehydratase OS=Thiobac... [more]
HIS7_PELPD3.919e-3945.24Imidazoleglycerol-phosphate dehydratase OS=Pelobac... [more]
HIS7_MAGSA3.919e-3948.21Imidazoleglycerol-phosphate dehydratase OS=Magneto... [more]
HIS7_CHRVO3.919e-3947.34Imidazoleglycerol-phosphate dehydratase OS=Chromob... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAP10YN21FM1 Fruit-TF Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY259991 ID=DY259991; Name=DY259991; organism=Citrus clementina; type=EST; length=917bp
GCTGCGTTTTGGCATATAGCCGTGTTGGCGTTGCTACTCTCTCTGCGACA
TTGGAAACGATAGTGTGTAAAATGGAGCTCTCGGTCCCAGCTCGCCTTGT
TCACCTTTCAATCTCGTCCACGTCCTCACGCCGGCTCCTCGTTAAACCAA
AAACCAATCTCTCTCGTAAACTTCTCCCCATCTCCACACAATACTGCTCC
TCAACGCGCCGCATGAACTCCCTCACAACACCACGCGCCTCTCTAAACCC
AGACGGCGACAGCAAACACAACAACGGGTCCGCCTCAACTTCCTCTGCCG
TCGATTCTGGTCGAATTGGGGAAGTGAAAAGAGTCACGAAAGAGACCAAC
GTTTCTGTGAAGATTAACGTCGATGGCTCTGGCGTTGCTGATTCATCCAC
TTGCATTCCCTTCCTAGATCACATGCTTGATCAACTGGCTTCGCACGGGC
TATTTGATGTGCACGTGAGGGCAACCGGAGACATTCACATTGATGATCAT
CATACCAATGAAGACGTTGGGCTTGCCATTGGCACGGCATTGCTGCAAGC
TCTTGGTGATAGGAAAGGAATTAATCGGTTTGGTGATTTTACAGCTCCTC
TTGATGAAGCTTTGATTCATGTTTCATTGGATTTATCTGGACGGCCACAT
TTAAATTATGATTTGCAAATTCCCACACAGAAAGTTGGAACTTACAACAC
TCAATTGGTGGAACCACTTTTCCAATCCTTGGTGAACACTTCTGGGATGG
ACCCTTCCATTCAACAGCTTGCTGGAAAAAATTCCTCTCACATTATTGAG
GCAACCCTCAAAGCTTTTTGCTAGGGCTCTCCGAAAAGCAACAAAATTAG
GACCCCGTCGCCGTGGAAATATACCCAACCTCAAAGGGGGTTCTCCAACA
TCTTGGAATCTCGACGG
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