DY259991

Overview
NameDY259991
Unique NameDY259991
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length917
Libraries
Library NameType
Fruit-TFcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig1388 contig Ccv1_Contig1388:1..916. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of DY259991 vs. ExPASy Swiss-Prot
Match: HIS7_PROM2 (Imidazoleglycerol-phosphate dehydratase OS=Prochlorococcus marinus (strain MIT 9215) GN=hisB PE=3 SV=1)

HSP 1 Score: 215.312 bits (547), Expect = 3.900e-55
Identity = 100/173 (57.80%), Postives = 135/173 (78.03%), Query Frame = 3
Query:  300 VDSGRIGEVKRVTKETNVSVKINVDGSGVADSSTCIPFLDHMLDQLASHGLFDVHVRATGDIHIDDHHTNEDVGLAIGTALLQALGDRKGINRFGDFTAPLDEALIHVSLDLSGRPHLNYDLQIPTQKVGTYNTQLVEPLFQSLVNTSGMDPSIQQLAGKNSSHIIEATLKAF 818
            + S R  E+KR T ET++SV IN+DG+G+++  T +PFLDHML Q++SHGLFD+ ++A GD +IDDHHTNEDVG+A+G A  +ALG+RKGI+RFG F APLDEAL+ V+LD SGRPHL+YDLQ+   ++G Y+T+LV+  F + VN+SG+   I Q+ G NS HI+EA  KAF
Sbjct:    1 MSSLRQSEIKRKTNETDISVFINLDGNGISEIETGVPFLDHMLHQISSHGLFDLKIKAIGDTYIDDHHTNEDVGIALGKAFSKALGERKGISRFGHFFAPLDEALVQVTLDCSGRPHLSYDLQLKAPRIGNYDTELVKEFFIAFVNSSGITLHINQIRGSNSHHIVEACFKAF 173          
BLAST of DY259991 vs. ExPASy Swiss-Prot
Match: HIS7_SYNJA (Imidazoleglycerol-phosphate dehydratase OS=Synechococcus sp. (strain JA-3-3Ab) GN=hisB PE=3 SV=1)

HSP 1 Score: 199.904 bits (507), Expect = 1.459e-53
Identity = 95/169 (56.21%), Postives = 126/169 (74.56%), Query Frame = 3
Query:  312 RIGEVKRVTKETNVSVKINVDGSGVADSSTCIPFLDHMLDQLASHGLFDVHVRATGDIHIDDHHTNEDVGLAIGTALLQALGDRKGINRFGDFTAPLDEALIHVSLDLSGRPHLNYDLQIPTQKVGTYNTQLVEPLFQSLVNTSGMDPSIQQLAGKNSSHIIEATLKAF 818
            R   V+R T ET+V V++++DG G  +  T IPFLDHML QL++HGL D+ ++A GD+HIDDHHTNEDVG+A+G AL QAL DR+GI RFG F APLDEAL+ V LD SGRPHL+Y L++  +++G Y TQLV   +Q++ N + M   I+Q AG N+ HI+EA+ KAF
Sbjct:   13 RTAFVQRRTAETDVQVRLSLDGKGQHEIDTGIPFLDHMLAQLSTHGLIDLQIKAVGDLHIDDHHTNEDVGIALGQALAQALQDRRGIYRFGHFWAPLDEALVQVVLDFSGRPHLSYGLELTVERIGRYETQLVREFYQAVANHAQMTLHIRQAAGLNAHHIVEASFKAF 181          

HSP 2 Score: 31.9574 bits (71), Expect = 1.459e-53
Identity = 15/26 (57.69%), Postives = 18/26 (69.23%), Query Frame = 1
Query:  811 KLFARALRKATKLGPRRRGNIPNLKG 888
            K FARALR A +  PRR+  IP+ KG
Sbjct:  179 KAFARALRMAVERDPRRQDGIPSSKG 204          
BLAST of DY259991 vs. ExPASy Swiss-Prot
Match: HIS7_SILST (Imidazoleglycerol-phosphate dehydratase OS=Silicibacter sp. (strain TM1040) GN=hisB PE=3 SV=1)

HSP 1 Score: 188.348 bits (477), Expect = 7.664e-49
Identity = 88/168 (52.38%), Postives = 119/168 (70.83%), Query Frame = 3
Query:  312 RIGEVKRVTKETNVSVKINVDGSGVADSSTCIPFLDHMLDQLASHGLFDVHVRATGDIHIDDHHTNEDVGLAIGTALLQALGDRKGINRFGDFTAPLDEALIHVSLDLSGRPHLNYDLQIPTQKVGTYNTQLVEPLFQSLVNTSGMDPSIQQLAGKNSSHIIEATLKA 815
            R  +V R T ET +SV +N+DGSG  D+ T + F DHMLDQL+ H L D+ +RA GD HIDDHHT ED G+A+G AL+QALGD+KGINR+G+   P+D+A +  +LDLS RP L +++ +PTQK+G+++T+LV   FQ+L    G+   I Q+ G NS HI EA  KA
Sbjct:    2 RTAQVSRSTAETEISVSVNLDGSGTYDNQTGVGFFDHMLDQLSRHSLIDMTIRAKGDYHIDDHHTVEDTGIALGQALVQALGDKKGINRYGECHLPMDDAQVRAALDLSARPFLVWNVDLPTQKIGSFDTELVREFFQALATHGGITLHIDQIHGVNSHHIAEAAFKA 169          

HSP 2 Score: 27.7202 bits (60), Expect = 7.664e-49
Identity = 12/26 (46.15%), Postives = 17/26 (65.38%), Query Frame = 1
Query:  811 KLFARALRKATKLGPRRRGNIPNLKG 888
            K  ARALR A ++ PR+   +P+ KG
Sbjct:  168 KAVARALRTAVEVDPRKADAVPSTKG 193          
BLAST of DY259991 vs. ExPASy Swiss-Prot
Match: HIS7_JANSC (Imidazoleglycerol-phosphate dehydratase OS=Jannaschia sp. (strain CCS1) GN=hisB PE=3 SV=1)

HSP 1 Score: 185.267 bits (469), Expect = 1.842e-47
Identity = 86/168 (51.19%), Postives = 120/168 (71.43%), Query Frame = 3
Query:  312 RIGEVKRVTKETNVSVKINVDGSGVADSSTCIPFLDHMLDQLASHGLFDVHVRATGDIHIDDHHTNEDVGLAIGTALLQALGDRKGINRFGDFTAPLDEALIHVSLDLSGRPHLNYDLQIPTQKVGTYNTQLVEPLFQSLVNTSGMDPSIQQLAGKNSSHIIEATLKA 815
            R  ++ R T ET++SV+IN+DG+G  D+ T + F DHMLDQLA H L D+ VR  GD+HIDDHH+ EDVG+A+G AL QA+GD++GI R+G+   P+D+A +  +LDLSGRP L +D+++PT K+GT++T+LV   FQ+     G+   + Q AG NS HI EA  KA
Sbjct:    2 RTAQITRKTAETDISVEINLDGTGTYDNLTGVGFFDHMLDQLARHALMDMTVRCAGDLHIDDHHSVEDVGIALGQALTQAMGDKRGIRRYGECVLPMDDARVACALDLSGRPFLVWDVEMPTAKIGTFDTELVREFFQAFATHGGITLHLTQAAGVNSHHIAEAAFKA 169          

HSP 2 Score: 26.1794 bits (56), Expect = 1.842e-47
Identity = 13/26 (50.00%), Postives = 16/26 (61.54%), Query Frame = 1
Query:  811 KLFARALRKATKLGPRRRGNIPNLKG 888
            K  ARALR A ++ PR    IP+ KG
Sbjct:  168 KATARALRDALEVDPRTADAIPSTKG 193          
BLAST of DY259991 vs. ExPASy Swiss-Prot
Match: HIS7_DINSH (Imidazoleglycerol-phosphate dehydratase OS=Dinoroseobacter shibae (strain DFL 12) GN=hisB PE=3 SV=1)

HSP 1 Score: 183.726 bits (465), Expect = 3.129e-47
Identity = 85/168 (50.60%), Postives = 122/168 (72.62%), Query Frame = 3
Query:  312 RIGEVKRVTKETNVSVKINVDGSGVADSSTCIPFLDHMLDQLASHGLFDVHVRATGDIHIDDHHTNEDVGLAIGTALLQALGDRKGINRFGDFTAPLDEALIHVSLDLSGRPHLNYDLQIPTQKVGTYNTQLVEPLFQSLVNTSGMDPSIQQLAGKNSSHIIEATLKA 815
            R   + R T ET++SV+I++DG+GV D+ T + F DHMLDQL+ H L D+ VR  GD+HIDDHHT EDVG+A+G AL +A+GD++GI R+G    P+D+AL+  +LD+SGRP+L +D+ +PT K+GT++T+LV   FQ+L    G+   + +LAG NS HI EA  K+
Sbjct:    2 RRATITRKTAETDISVEIDLDGTGVYDNRTGVGFFDHMLDQLSRHALIDMTVRCDGDLHIDDHHTVEDVGIALGQALAEAVGDKRGIVRYGSCLLPMDDALVRAALDISGRPYLVWDVALPTAKIGTFDTELVREFFQALATHGGLTLHVTRLAGINSHHIAEAAFKS 169          

HSP 2 Score: 26.9498 bits (58), Expect = 3.129e-47
Identity = 13/26 (50.00%), Postives = 16/26 (61.54%), Query Frame = 1
Query:  811 KLFARALRKATKLGPRRRGNIPNLKG 888
            K  ARALR A +  PR+   IP+ KG
Sbjct:  168 KSVARALRAALETDPRKANAIPSTKG 193          
BLAST of DY259991 vs. ExPASy Swiss-Prot
Match: HIS7_RHOFD (Imidazoleglycerol-phosphate dehydratase OS=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) GN=hisB PE=3 SV=1)

HSP 1 Score: 173.711 bits (439), Expect = 9.787e-46
Identity = 88/178 (49.44%), Postives = 115/178 (64.61%), Query Frame = 3
Query:  285 STSSAVDSGRIGEVKRVTKETNVSVKINVDGSGVADSSTCIPFLDHMLDQLASHGLFDVHVRATGDIHIDDHHTNEDVGLAIGTALLQALGDRKGINRFGDFTAPLDEALIHVSLDLSGRPHLNYDLQIPTQKVGTYNTQLVEPLFQSLVNTSGMDPSIQQLAGKNSSHIIEATLKAF 818
            ST  A+   R  EV R T ET ++VK+N+DGSG +  ST I F DHMLDQ+A HGL D+ ++ATGD+HID HHT EDVG+ +G A+ QA+GD+KGI R+G    PLDEAL  V +D SGRP L  D+   +  +GT++ QL    FQ  VN + +   I  L G+N+ H  E   KAF
Sbjct:    2 STPIALVPARTAEVTRNTAETRITVKVNLDGSGQSHLSTGIGFFDHMLDQIARHGLIDLDIQATGDLHIDGHHTVEDVGITLGQAVHQAVGDKKGIRRYGHAYVPLDEALSRVVIDFSGRPGLVMDVPFKSGMIGTFDAQLAHEFFQGFVNHAFVTLHIDNLKGENAHHQAETVFKAF 179          

HSP 2 Score: 31.9574 bits (71), Expect = 9.787e-46
Identity = 15/26 (57.69%), Postives = 17/26 (65.38%), Query Frame = 1
Query:  811 KLFARALRKATKLGPRRRGNIPNLKG 888
            K FARALR A +  PR  G IP+ KG
Sbjct:  177 KAFARALRAALEFDPRALGQIPSTKG 202          
BLAST of DY259991 vs. ExPASy Swiss-Prot
Match: HIS7_SILPO (Imidazoleglycerol-phosphate dehydratase OS=Silicibacter pomeroyi GN=hisB PE=3 SV=1)

HSP 1 Score: 176.407 bits (446), Expect = 3.683e-45
Identity = 84/168 (50.00%), Postives = 113/168 (67.26%), Query Frame = 3
Query:  312 RIGEVKRVTKETNVSVKINVDGSGVADSSTCIPFLDHMLDQLASHGLFDVHVRATGDIHIDDHHTNEDVGLAIGTALLQALGDRKGINRFGDFTAPLDEALIHVSLDLSGRPHLNYDLQIPTQKVGTYNTQLVEPLFQSLVNTSGMDPSIQQLAGKNSSHIIEATLKA 815
            R   + R T ET +SV IN+DG+G  D+ T + F DHMLDQLA H L D+ + A GD HIDDHHT ED G+A+G AL  ALGD++GI R+G+   P+D+A +  +LDLSGRP L +++ +PT K+GT++T+LV   FQ+     G+   + QL G NS HI EA  KA
Sbjct:    2 RRASISRQTAETEISVDINLDGTGAYDNQTGVGFFDHMLDQLARHSLIDMTISAKGDYHIDDHHTVEDTGIALGQALSAALGDKRGIRRYGECHLPMDDAQVRCALDLSGRPFLVWNVDLPTAKIGTFDTELVREFFQAFSTHGGITLHVDQLHGLNSHHIAEAAFKA 169          

HSP 2 Score: 27.335 bits (59), Expect = 3.683e-45
Identity = 13/26 (50.00%), Postives = 17/26 (65.38%), Query Frame = 1
Query:  811 KLFARALRKATKLGPRRRGNIPNLKG 888
            K  ARALR+A +  PR+   IP+ KG
Sbjct:  168 KAVARALRQAVESDPRKGDAIPSTKG 193          
BLAST of DY259991 vs. ExPASy Swiss-Prot
Match: HIS7_BURXL (Imidazoleglycerol-phosphate dehydratase OS=Burkholderia xenovorans (strain LB400) GN=hisB PE=3 SV=1)

HSP 1 Score: 172.17 bits (435), Expect = 3.683e-45
Identity = 82/169 (48.52%), Postives = 111/169 (65.68%), Query Frame = 3
Query:  312 RIGEVKRVTKETNVSVKINVDGSGVADSSTCIPFLDHMLDQLASHGLFDVHVRATGDIHIDDHHTNEDVGLAIGTALLQALGDRKGINRFGDFTAPLDEALIHVSLDLSGRPHLNYDLQIPTQKVGTYNTQLVEPLFQSLVNTSGMDPSIQQLAGKNSSHIIEATLKAF 818
            R+ EV R T ET + VKIN+DG+G    +T +PFLDHMLDQ+A HGLFD+ + A GD+HIDDHHT ED G+ +G A+ +A+GD+KGI R+G    PLDEAL  V +D SGRP L + +     ++GT++  L    F+  VN +G+   I  L G N+ H +E   KAF
Sbjct:    2 RLAEVVRNTSETQIRVKINLDGTGQQKLATGVPFLDHMLDQIARHGLFDLEIEAHGDLHIDDHHTVEDTGITLGQAVAKAIGDKKGIRRYGHSYVPLDEALSRVVIDFSGRPGLEFHVPFTRARIGTFDVDLSIEFFRGFVNHAGVTLHIDNLRGLNAHHQMETVFKAF 170          

HSP 2 Score: 31.5722 bits (70), Expect = 3.683e-45
Identity = 15/26 (57.69%), Postives = 17/26 (65.38%), Query Frame = 1
Query:  811 KLFARALRKATKLGPRRRGNIPNLKG 888
            K F RALR AT+L  R  G IP+ KG
Sbjct:  168 KAFGRALRMATELDERAAGQIPSTKG 193          
BLAST of DY259991 vs. ExPASy Swiss-Prot
Match: HIS7_BURPP (Imidazoleglycerol-phosphate dehydratase OS=Burkholderia phytofirmans (strain DSM 17436 / PsJN) GN=hisB PE=3 SV=1)

HSP 1 Score: 172.17 bits (435), Expect = 3.683e-45
Identity = 83/169 (49.11%), Postives = 111/169 (65.68%), Query Frame = 3
Query:  312 RIGEVKRVTKETNVSVKINVDGSGVADSSTCIPFLDHMLDQLASHGLFDVHVRATGDIHIDDHHTNEDVGLAIGTALLQALGDRKGINRFGDFTAPLDEALIHVSLDLSGRPHLNYDLQIPTQKVGTYNTQLVEPLFQSLVNTSGMDPSIQQLAGKNSSHIIEATLKAF 818
            R+ EV R T ET + VKIN+DG+G    +T +PFLDHMLDQ+A HGLFD+ + A GD+HIDDHHT ED G+ +G A+ +A+GDRKGI R+G    PLDEAL  V +D SGRP L + +     ++GT++  L    F+  VN +G+   I  L G N+ H +E   KAF
Sbjct:    2 RLAEVVRNTSETQIRVKINLDGTGQQKLATGVPFLDHMLDQIARHGLFDLEIEAHGDLHIDDHHTVEDTGITLGQAVAKAIGDRKGIVRYGHSYVPLDEALSRVVIDFSGRPGLEFHVPFTRARIGTFDVDLSIEFFRGFVNHAGVTLHIDNLRGLNAHHQMETVFKAF 170          

HSP 2 Score: 31.5722 bits (70), Expect = 3.683e-45
Identity = 15/26 (57.69%), Postives = 17/26 (65.38%), Query Frame = 1
Query:  811 KLFARALRKATKLGPRRRGNIPNLKG 888
            K F RALR AT+L  R  G IP+ KG
Sbjct:  168 KAFGRALRMATELDERAAGQIPSTKG 193          
BLAST of DY259991 vs. ExPASy Swiss-Prot
Match: HIS7_RHOSK (Imidazoleglycerol-phosphate dehydratase OS=Rhodobacter sphaeroides (strain KD131 / KCTC 12085) GN=hisB PE=3 SV=1)

HSP 1 Score: 176.022 bits (445), Expect = 4.799e-45
Identity = 82/168 (48.81%), Postives = 116/168 (69.05%), Query Frame = 3
Query:  312 RIGEVKRVTKETNVSVKINVDGSGVADSSTCIPFLDHMLDQLASHGLFDVHVRATGDIHIDDHHTNEDVGLAIGTALLQALGDRKGINRFGDFTAPLDEALIHVSLDLSGRPHLNYDLQIPTQKVGTYNTQLVEPLFQSLVNTSGMDPSIQQLAGKNSSHIIEATLKA 815
            R  E+ R T ET++SV +++DG+G  D  T + F DHM+DQLA H L D+ +R  GD+HIDDHHT ED G+A+G AL +ALGD++GI R+G F   +D+AL+  +LDLSGRP L ++L  PT+K+G+++T+LV   FQ+L    G+   +  + G NS HI EA  KA
Sbjct:    2 RKAEISRKTAETDISVTVDLDGTGRYDIRTGVGFFDHMMDQLARHALIDITLRCEGDLHIDDHHTVEDCGIALGQALTRALGDKRGIRRYGSFHLAMDDALVRAALDLSGRPFLVWNLPFPTEKIGSFDTELVREFFQALATHGGITLHVDLIHGVNSHHIAEAAFKA 169          

HSP 2 Score: 27.335 bits (59), Expect = 4.799e-45
Identity = 13/26 (50.00%), Postives = 17/26 (65.38%), Query Frame = 1
Query:  811 KLFARALRKATKLGPRRRGNIPNLKG 888
            K  AR+LR+A +  PRR   IP+ KG
Sbjct:  168 KAVARSLREAVEPDPRRADAIPSTKG 193          
The following BLAST results are available for this feature:
BLAST of DY259991 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
HIS7_PROM23.900e-5557.80Imidazoleglycerol-phosphate dehydratase OS=Prochlo... [more]
HIS7_SYNJA1.459e-5356.21Imidazoleglycerol-phosphate dehydratase OS=Synecho... [more]
HIS7_SILST7.664e-4952.38Imidazoleglycerol-phosphate dehydratase OS=Silicib... [more]
HIS7_JANSC1.842e-4751.19Imidazoleglycerol-phosphate dehydratase OS=Jannasc... [more]
HIS7_DINSH3.129e-4750.60Imidazoleglycerol-phosphate dehydratase OS=Dinoros... [more]
HIS7_RHOFD9.787e-4649.44Imidazoleglycerol-phosphate dehydratase OS=Rhodofe... [more]
HIS7_SILPO3.683e-4550.00Imidazoleglycerol-phosphate dehydratase OS=Silicib... [more]
HIS7_BURXL3.683e-4548.52Imidazoleglycerol-phosphate dehydratase OS=Burkhol... [more]
HIS7_BURPP3.683e-4549.11Imidazoleglycerol-phosphate dehydratase OS=Burkhol... [more]
HIS7_RHOSK4.799e-4548.81Imidazoleglycerol-phosphate dehydratase OS=Rhodoba... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAP10YN21FM1 Fruit-TF Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY259991 ID=DY259991; Name=DY259991; organism=Citrus clementina; type=EST; length=917bp
GCTGCGTTTTGGCATATAGCCGTGTTGGCGTTGCTACTCTCTCTGCGACA
TTGGAAACGATAGTGTGTAAAATGGAGCTCTCGGTCCCAGCTCGCCTTGT
TCACCTTTCAATCTCGTCCACGTCCTCACGCCGGCTCCTCGTTAAACCAA
AAACCAATCTCTCTCGTAAACTTCTCCCCATCTCCACACAATACTGCTCC
TCAACGCGCCGCATGAACTCCCTCACAACACCACGCGCCTCTCTAAACCC
AGACGGCGACAGCAAACACAACAACGGGTCCGCCTCAACTTCCTCTGCCG
TCGATTCTGGTCGAATTGGGGAAGTGAAAAGAGTCACGAAAGAGACCAAC
GTTTCTGTGAAGATTAACGTCGATGGCTCTGGCGTTGCTGATTCATCCAC
TTGCATTCCCTTCCTAGATCACATGCTTGATCAACTGGCTTCGCACGGGC
TATTTGATGTGCACGTGAGGGCAACCGGAGACATTCACATTGATGATCAT
CATACCAATGAAGACGTTGGGCTTGCCATTGGCACGGCATTGCTGCAAGC
TCTTGGTGATAGGAAAGGAATTAATCGGTTTGGTGATTTTACAGCTCCTC
TTGATGAAGCTTTGATTCATGTTTCATTGGATTTATCTGGACGGCCACAT
TTAAATTATGATTTGCAAATTCCCACACAGAAAGTTGGAACTTACAACAC
TCAATTGGTGGAACCACTTTTCCAATCCTTGGTGAACACTTCTGGGATGG
ACCCTTCCATTCAACAGCTTGCTGGAAAAAATTCCTCTCACATTATTGAG
GCAACCCTCAAAGCTTTTTGCTAGGGCTCTCCGAAAAGCAACAAAATTAG
GACCCCGTCGCCGTGGAAATATACCCAACCTCAAAGGGGGTTCTCCAACA
TCTTGGAATCTCGACGG
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