DY259991

Overview
NameDY259991
Unique NameDY259991
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length917
Libraries
Library NameType
Fruit-TFcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY259991 vs. ExPASy Swiss-Prot
Match: HIS7_BIFLO (Imidazoleglycerol-phosphate dehydratase OS=Bifidobacterium longum GN=hisB PE=3 SV=1)

HSP 1 Score: 130.568 bits (327), Expect = 1.264e-29
Identity = 69/172 (40.12%), Postives = 99/172 (57.56%), Query Frame = 3
Query:  312 RIGEVKRVTKETNVSVKINVDGSGVADSSTCIPFLDHMLDQLASHGLFDVHVRATGDIHIDDHHTNEDVGLAIGTALLQALGDRKGINRFGDFTAPLDEALIHVSLDLSGRPHLNYDLQIPTQKV----GTYNTQLVEPLFQSLVNTSGMDPSIQQLAGKNSSHIIEATLKA 815
            R   + R T E+++ +++N+DG+G  D  T +PF +HM+  L  H L D+ + A GD  ID HHT ED  +  G AL QALGD+KGI RF D T PLDEAL    +D+SGRP+     +    +     G +   LV  + +S+   +G+   +Q LAG++  HI EA  KA
Sbjct:    3 RTAHIVRETSESHIDLELNLDGTGKTDIDTSVPFYNHMMTALGKHSLIDLTIHAHGDTDIDVHHTVEDTAIVFGEALKQALGDKKGIRRFADATVPLDEALAKAVVDISGRPYCVCSGEPEGYEFCMIGGHFTGSLVRHVMESIAFHAGICLHMQVLAGRDPHHIAEAEFKA 174          
BLAST of DY259991 vs. ExPASy Swiss-Prot
Match: HIS7_BIFLI (Imidazoleglycerol-phosphate dehydratase OS=Bifidobacterium longum subsp. infantis (strain ATCC 15697 / DSM 20088 / NCTC 11817 / S12) GN=hisB PE=3 SV=1)

HSP 1 Score: 130.568 bits (327), Expect = 1.264e-29
Identity = 69/172 (40.12%), Postives = 99/172 (57.56%), Query Frame = 3
Query:  312 RIGEVKRVTKETNVSVKINVDGSGVADSSTCIPFLDHMLDQLASHGLFDVHVRATGDIHIDDHHTNEDVGLAIGTALLQALGDRKGINRFGDFTAPLDEALIHVSLDLSGRPHLNYDLQIPTQKV----GTYNTQLVEPLFQSLVNTSGMDPSIQQLAGKNSSHIIEATLKA 815
            R   + R T E+++ +++N+DG+G  D  T +PF +HM+  L  H L D+ + A GD  ID HHT ED  +  G AL QALGD+KGI RF D T PLDEAL    +D+SGRP+     +    +     G +   LV  + +S+   +G+   +Q LAG++  HI EA  KA
Sbjct:    3 RTAHIVRETSESHIDLELNLDGTGKTDIDTSVPFYNHMMTALGKHSLIDLTIHAHGDTDIDVHHTVEDTAIVFGEALKQALGDKKGIRRFADATVPLDEALAKAVVDISGRPYCVCSGEPEGYEFCMIGGHFTGSLVRHVMESIAFHAGICLHMQVLAGRDPHHIAEAEFKA 174          
BLAST of DY259991 vs. ExPASy Swiss-Prot
Match: HIS7_BIFLD (Imidazoleglycerol-phosphate dehydratase OS=Bifidobacterium longum (strain DJO10A) GN=hisB PE=3 SV=1)

HSP 1 Score: 130.568 bits (327), Expect = 1.264e-29
Identity = 69/172 (40.12%), Postives = 99/172 (57.56%), Query Frame = 3
Query:  312 RIGEVKRVTKETNVSVKINVDGSGVADSSTCIPFLDHMLDQLASHGLFDVHVRATGDIHIDDHHTNEDVGLAIGTALLQALGDRKGINRFGDFTAPLDEALIHVSLDLSGRPHLNYDLQIPTQKV----GTYNTQLVEPLFQSLVNTSGMDPSIQQLAGKNSSHIIEATLKA 815
            R   + R T E+++ +++N+DG+G  D  T +PF +HM+  L  H L D+ + A GD  ID HHT ED  +  G AL QALGD+KGI RF D T PLDEAL    +D+SGRP+     +    +     G +   LV  + +S+   +G+   +Q LAG++  HI EA  KA
Sbjct:    3 RTAHIVRETSESHIDLELNLDGTGKTDIDTSVPFYNHMMTALGKHSLIDLTIHAHGDTDIDVHHTVEDTAIVFGEALKQALGDKKGIRRFADATVPLDEALAKAVVDISGRPYCVCSGEPEGYEFCMIGGHFTGSLVRHVLESIAFHAGICLHMQVLAGRDPHHIAEAEFKA 174          
BLAST of DY259991 vs. ExPASy Swiss-Prot
Match: HIS7_BACC4 (Imidazoleglycerol-phosphate dehydratase OS=Bacillus cereus (strain B4264) GN=hisB PE=3 SV=1)

HSP 1 Score: 130.568 bits (327), Expect = 1.264e-29
Identity = 63/163 (38.65%), Postives = 99/163 (60.74%), Query Frame = 3
Query:  330 RVTKETNVSVKINVDGSGVADSSTCIPFLDHMLDQLASHGLFDVHVRATGDIHIDDHHTNEDVGLAIGTALLQALGDRKGINRFGDFTAPLDEALIHVSLDLSGRPHLNYDLQIPTQKVGTYNTQLVEPLFQSLVNTSGMDPSIQQLAGKNSSHIIEATLKAF 818
            R TKET + + + +D S      T + F DHML   A HG F + V A GD+ +D HHT EDVG+ +G  L +AL +++GINR+G    P+DE+L  V++D+SGR +  +  ++   K+G ++T+L E  F+++ + + +    + L G N+ H IEA  KAF
Sbjct:    8 RETKETKIKLNLQLDESTNVSIQTGVGFFDHMLTLFARHGRFGLQVEAEGDVFVDAHHTVEDVGIVLGNCLKEALQNKEGINRYGSAYVPMDESLGFVAIDISGRSYCVFQGELTNPKLGDFDTELTEEFFRAVAHAANITLHARVLYGSNTHHKIEALFKAF 170          
BLAST of DY259991 vs. ExPASy Swiss-Prot
Match: HIS7_DESMR (Imidazoleglycerol-phosphate dehydratase OS=Desulfovibrio magneticus (strain ATCC 700980 / DSM 13731 / RS-1) GN=hisB PE=3 SV=1)

HSP 1 Score: 130.183 bits (326), Expect = 1.650e-29
Identity = 71/168 (42.26%), Postives = 96/168 (57.14%), Query Frame = 3
Query:  312 RIGEVKRVTKETNVSVKINVDGSGVADSSTCIPFLDHMLDQLASHGLFDVHVRATGDIHIDDHHTNEDVGLAIGTALLQALGDRKGINRFGDFTAPLDEALIHVSLDLSGRPHLNYDLQIPTQKVGTYNTQLVEPLFQSLVNTSGMDPSIQQLAGKNSSHIIEATLKA 815
            R G   R T ET V+V+I +DG G A   T   F DHML+ LA    FD+++   GD+ +D HHT EDV + +G A  QALG+R GI R GD   P+DEAL  V +DLSGRP+L Y   +    +      L    F+SL  ++ M+  I  + G+N  H++EA  KA
Sbjct:    4 RFGAYSRETGETRVAVEITIDGKGNAAIDTGFGFADHMLNLLAFWAGFDLNLTCRGDLEVDAHHTLEDVAICLGEAFRQALGERVGIERVGDARVPMDEALCDVVVDLSGRPYLVYREDVLPPVIAGEEKDLWREFFKSLAISARMNLHIHFVYGQNGHHLVEAAFKA 171          
BLAST of DY259991 vs. ExPASy Swiss-Prot
Match: HIS7_PHARH (Imidazoleglycerol-phosphate dehydratase OS=Phaffia rhodozyma GN=HIS3 PE=3 SV=1)

HSP 1 Score: 129.798 bits (325), Expect = 2.155e-29
Identity = 69/173 (39.88%), Postives = 99/173 (57.23%), Query Frame = 3
Query:  312 RIGEVKRVTKETNVSVKINVDGSG-----VADSSTCIPFLDHMLDQLASHGLFDVHVRATGDIHIDDHHTNEDVGLAIGTALLQALGDRKGINRFGDFTAPLDEALIHVSLDLSGRPHLNYDLQIPTQKVGTYNTQLVEPLFQSLVNTSGMDPSIQQLAGKNSSHIIEATLKA 815
            R   V R T ET +   I++D +      + D  T I FL+HML  +A HG   + +   GD+ IDDHHT ED  LA+G A   ALG+R+GI R+G   APLDEAL    LD+S RP+   DL    +K+G  +T+++  +F+S    +G+   +  + G N+ HI EA+ KA
Sbjct:    8 RTATVTRNTNETQIVCSISLDHTPGVDQQIIDIQTGIGFLNHMLHAMAKHGNMSLTLHCKGDLEIDDHHTAEDCALALGEAFKLALGERRGIRRYGTGFAPLDEALSRAVLDISSRPYFCGDLPFTREKIGDLSTEMIPHVFESFATAAGVTLHVDCIRGVNNHHIAEASFKA 180          
BLAST of DY259991 vs. ExPASy Swiss-Prot
Match: HIS7_METPE (Imidazoleglycerol-phosphate dehydratase OS=Methanosphaerula palustris (strain ATCC BAA-1556 / DSM 19958 / E1-9c) GN=hisB PE=3 SV=1)

HSP 1 Score: 129.798 bits (325), Expect = 2.155e-29
Identity = 72/167 (43.11%), Postives = 99/167 (59.28%), Query Frame = 3
Query:  324 VKRVTKETNVSVKINVDGSGVADS--STCIPFLDHMLDQLASHGLFDVHVRATGDIHIDDHHTNEDVGLAIGTALLQALGDRKGINRFGDFTAPLDEALIHVSLDLSGRPHLNYDLQIPTQKVGTYNTQLVEPLFQSLVNTSGMDPSIQQLAGKNSSHIIEATLKAF 818
            V+R T ET++ +KI +D +       ST IPF DHM+  ++ HG FD+++ A GD+ +D HHT ED+G+ +GTAL QALGD +GI RFG    P+DEAL    LD  GR +L +        VG  +T L E  F SL   +G+   I + +G+N  H  EA  KAF
Sbjct:    6 VERRTSETDIVLKIGLDRTEPHQITISTGIPFFDHMVQAMSRHGGFDLNITAKGDLEVDSHHTIEDIGIVLGTALQQALGDGRGIKRFGYAIIPMDEALAEAVLDCGGRGYLVFKGTFGNSTVGGIDTSLFEHFFYSLCIHAGITAHI-RFSGQNDHHTAEAIFKAF 171          
BLAST of DY259991 vs. ExPASy Swiss-Prot
Match: HIS7_METMP (Imidazoleglycerol-phosphate dehydratase OS=Methanococcus maripaludis GN=hisB PE=3 SV=1)

HSP 1 Score: 129.798 bits (325), Expect = 2.155e-29
Identity = 67/169 (39.64%), Postives = 103/169 (60.95%), Query Frame = 3
Query:  312 RIGEVKRVTKETNVSVKINVDGSGVADSSTCIPFLDHMLDQLASHGLFDVHVRATGDIHIDDHHTNEDVGLAIGTALLQALGDRKGINRFGDFTAPLDEALIHVSLDLSGRPHLNYDLQIPTQKVGTYNTQLVEPLFQSLVNTSGMDPSIQQLAGKNSSHIIEATLKAF 818
            R  +VKR T ET + +++N+DG+G    +T IPF DH+L   A HG FD+ +   GD+ IDDHHT EDVG+ +G A      ++K I RFG    P+DEA   VS+D+ GRP +  +    T+++G+++T+ V   F+S  N + ++    ++ G+N  H +EA  KAF
Sbjct:    2 RAFKVKRDTNETKIQLELNIDGTGKYSITTGIPFFDHVLSSFAKHGSFDLKLDVLGDLEIDDHHTVEDVGIVLGKAFENM--EKKNIKRFGWAIIPMDEAKATVSIDIGGRPFVVGNYVPNTERIGSFSTENVVHFFESFSNNAKINLHF-EVTGENEHHKVEALFKAF 167          
BLAST of DY259991 vs. ExPASy Swiss-Prot
Match: HIS7_METS5 (Imidazoleglycerol-phosphate dehydratase OS=Metallosphaera sedula (strain ATCC 51363 / DSM 5348) GN=hisB PE=3 SV=1)

HSP 1 Score: 129.413 bits (324), Expect = 2.815e-29
Identity = 66/167 (39.52%), Postives = 97/167 (58.08%), Query Frame = 3
Query:  312 RIGEVKRVTKETNVSVKINVDGSGVADSSTCIPFLDHMLDQLASHGLFDVHVRATGDIHIDDHHTNEDVGLAIGTALLQALGDRKGINRFGDFTAPLDEALIHVSLDLSGRPHLNYDLQIPTQKVGTYNTQLVEPLFQSLVNTSGMDPSIQQLAGKNSSHIIEATLK 812
            R  E  R TKET V VK+ +DG G  +  T +PF DHML  +  +   +  +        DDHH  EDVG+ +G A+  ALGDR+GI RF     P+DEAL+ V++D+SGR + + +L +  +K+G  +T+ V   F SL   +G+   +++L G N  HI+EA  K
Sbjct:    3 RYVEKVRETKETKVQVKLELDGEGKVEIRTPVPFFDHMLHSMLFYMKVNATILGEDKQGYDDHHIVEDVGITLGQAIKDALGDRRGIKRFSSAVIPMDEALVLVAVDVSGRGYASTNLDLKREKIGDLSTENVAHFFWSLATNAGITLHVRKLDGVNEHHIVEAAFK 169          
BLAST of DY259991 vs. ExPASy Swiss-Prot
Match: HIS7_CAMJD (Histidine biosynthesis bifunctional protein hisB OS=Campylobacter jejuni subsp. doylei (strain ATCC BAA-1458 / RM4099 / 269.97) GN=hisB PE=3 SV=1)

HSP 1 Score: 129.413 bits (324), Expect = 2.815e-29
Identity = 69/173 (39.88%), Postives = 101/173 (58.38%), Query Frame = 3
Query:  300 VDSGRIGEVKRVTKETNVSVKINVDGSGVADSSTCIPFLDHMLDQLASHGLFDVHVRATGDIHIDDHHTNEDVGLAIGTALLQALGDRKGINRFGDFTAPLDEALIHVSLDLSGRPHLNYDLQIPTQKVGTYNTQLVEPLFQSLVNTSGMDPSIQQLAGKNSSHIIEATLKAF 818
            + S R    +R TKET++ VK+ ++G G     T I F DHML+Q+A HG   + +   GD+ ID+HH+ EDV LA+G  + +ALGD+ GI R+G FT P+DE L   ++D   RPHL Y  +     +G  +T+++E  F SL    G+   + ++ GKN  H  E   KAF
Sbjct:  161 LSSFRSASYQRTTKETDIKVKVCLNG-GKVSIKTGIDFFDHMLEQIAVHGDIGLEISCKGDLEIDEHHSVEDVALALGACIKKALGDKIGIARYG-FTLPMDECLASCAMDFCNRPHLVYKAKFKKSHLGALSTEMIEHFFYSLSYAMGVSLHL-KVKGKNDHHKAEGLFKAF 330          
The following BLAST results are available for this feature:
BLAST of DY259991 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
HIS7_BIFLO1.264e-2940.12Imidazoleglycerol-phosphate dehydratase OS=Bifidob... [more]
HIS7_BIFLI1.264e-2940.12Imidazoleglycerol-phosphate dehydratase OS=Bifidob... [more]
HIS7_BIFLD1.264e-2940.12Imidazoleglycerol-phosphate dehydratase OS=Bifidob... [more]
HIS7_BACC41.264e-2938.65Imidazoleglycerol-phosphate dehydratase OS=Bacillu... [more]
HIS7_DESMR1.650e-2942.26Imidazoleglycerol-phosphate dehydratase OS=Desulfo... [more]
HIS7_PHARH2.155e-2939.88Imidazoleglycerol-phosphate dehydratase OS=Phaffia... [more]
HIS7_METPE2.155e-2943.11Imidazoleglycerol-phosphate dehydratase OS=Methano... [more]
HIS7_METMP2.155e-2939.64Imidazoleglycerol-phosphate dehydratase OS=Methano... [more]
HIS7_METS52.815e-2939.52Imidazoleglycerol-phosphate dehydratase OS=Metallo... [more]
HIS7_CAMJD2.815e-2939.88Histidine biosynthesis bifunctional protein hisB O... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAP10YN21FM1 Fruit-TF Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY259991 ID=DY259991; Name=DY259991; organism=Citrus clementina; type=EST; length=917bp
GCTGCGTTTTGGCATATAGCCGTGTTGGCGTTGCTACTCTCTCTGCGACA
TTGGAAACGATAGTGTGTAAAATGGAGCTCTCGGTCCCAGCTCGCCTTGT
TCACCTTTCAATCTCGTCCACGTCCTCACGCCGGCTCCTCGTTAAACCAA
AAACCAATCTCTCTCGTAAACTTCTCCCCATCTCCACACAATACTGCTCC
TCAACGCGCCGCATGAACTCCCTCACAACACCACGCGCCTCTCTAAACCC
AGACGGCGACAGCAAACACAACAACGGGTCCGCCTCAACTTCCTCTGCCG
TCGATTCTGGTCGAATTGGGGAAGTGAAAAGAGTCACGAAAGAGACCAAC
GTTTCTGTGAAGATTAACGTCGATGGCTCTGGCGTTGCTGATTCATCCAC
TTGCATTCCCTTCCTAGATCACATGCTTGATCAACTGGCTTCGCACGGGC
TATTTGATGTGCACGTGAGGGCAACCGGAGACATTCACATTGATGATCAT
CATACCAATGAAGACGTTGGGCTTGCCATTGGCACGGCATTGCTGCAAGC
TCTTGGTGATAGGAAAGGAATTAATCGGTTTGGTGATTTTACAGCTCCTC
TTGATGAAGCTTTGATTCATGTTTCATTGGATTTATCTGGACGGCCACAT
TTAAATTATGATTTGCAAATTCCCACACAGAAAGTTGGAACTTACAACAC
TCAATTGGTGGAACCACTTTTCCAATCCTTGGTGAACACTTCTGGGATGG
ACCCTTCCATTCAACAGCTTGCTGGAAAAAATTCCTCTCACATTATTGAG
GCAACCCTCAAAGCTTTTTGCTAGGGCTCTCCGAAAAGCAACAAAATTAG
GACCCCGTCGCCGTGGAAATATACCCAACCTCAAAGGGGGTTCTCCAACA
TCTTGGAATCTCGACGG
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