DY259991

Overview
NameDY259991
Unique NameDY259991
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length917
Libraries
Library NameType
Fruit-TFcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY259991 vs. ExPASy Swiss-Prot
Match: HIS7_LEUMM (Imidazoleglycerol-phosphate dehydratase OS=Leuconostoc mesenteroides subsp. mesenteroides (strain ATCC 8293 / NCDO 523) GN=hisB PE=3 SV=1)

HSP 1 Score: 128.642 bits (322), Expect = 4.801e-29
Identity = 63/168 (37.50%), Postives = 96/168 (57.14%), Query Frame = 3
Query:  312 RIGEVKRVTKETNVSVKINVDGSGVADSSTCIPFLDHMLDQLASHGLFDVHVRATGDIHIDDHHTNEDVGLAIGTALLQALGDRKGINRFGDFTAPLDEALIHVSLDLSGRPHLNYDLQIPTQKVGTYNTQLVEPLFQSLVNTSGMDPSIQQLAGKNSSHIIEATLKA 815
            R   +KR T ET + + +++D        T I ++DHML   A HG F + V   GD+ +D HHT ED+G+ +G A  QALGD+ GI R+G    P+DE L    +DLSGR +L    ++    +GT+ T++VE  +Q   + +  +  I+ L G+N+ H IE+  KA
Sbjct:    3 RTATIKRDTFETQIELTLDLDEQTPIKVDTGIGYIDHMLTLFAKHGRFGLQVDVKGDLQVDSHHTTEDIGIVLGEAFTQALGDKVGIERYGAQFVPMDETLTRAVIDLSGRSYLVLHAELTAPTLGTFETEVVEDFWQGFADQARANVHIEVLYGRNTHHKIESMFKA 170          
BLAST of DY259991 vs. ExPASy Swiss-Prot
Match: HIS7_BUCAP (Histidine biosynthesis bifunctional protein hisB OS=Buchnera aphidicola subsp. Schizaphis graminum GN=hisB PE=3 SV=1)

HSP 1 Score: 128.642 bits (322), Expect = 4.801e-29
Identity = 74/187 (39.57%), Postives = 107/187 (57.22%), Query Frame = 3
Query:  288 TSSAVDSGRIGEVKRVTKETNVSVKINVDGSGVADSSTCIPFLDHMLDQLASHGLFDVHVRATGDIHIDDHHTNEDVGLAIGTALLQALGDRKGINRFGDFTAPLDEALIHVSLDLSGRPHLNYDLQIPTQKVGTYNTQLVEPLFQSLVNTSGMDPSIQQLAGKNSSHIIEATLKAFC*GSPKSNKI 848
            T   +   R  EV R TKET + +K+ +D    +   T I F DHML+QL+ H    +++ A GD+ IDDHHT ED G+ +G AL QAL ++ G++R+G F  P+DE+     +DLS RP+L+++     + VG  NT +VE  F SL  +  +   I  + GKN  H IE+  KAF     K+ KI
Sbjct:  159 TKEIIKRNRYREVIRETKETYIHIKLWLDLEHHSCIQTGINFFDHMLEQLSIHSGISMYILAKGDLQIDDHHTIEDTGIVLGEALSQALNNKNGLSRYG-FVLPMDESQAKCIIDLSNRPYLSFNAHFKHKMVGDMNTDMVEHFFYSLCCSMKITLHI-DVKGKNDHHCIESLFKAFGRALRKAVKI 343          
BLAST of DY259991 vs. ExPASy Swiss-Prot
Match: HIS7_PELLD (Imidazoleglycerol-phosphate dehydratase OS=Pelodictyon luteolum (strain DSM 273) GN=hisB PE=3 SV=1)

HSP 1 Score: 128.257 bits (321), Expect = 6.271e-29
Identity = 70/179 (39.11%), Postives = 101/179 (56.42%), Query Frame = 3
Query:  282 ASTSSAVDSGRIGEVKRVTKETNVSVKINVDGSGVADSSTCIPFLDHMLDQLASHGLFDVHVRATGDIHIDDHHTNEDVGLAIGTALLQALGDRKGINRFGDFTAPLDEALIHVSLDLSGRPHLNYDLQIPTQKVGTYNTQLVEPLFQSLVNTSGMDPSIQQLAGKNSSHIIEATLKAF 818
            ASTS+     R   V R T ET++S  +++DG+G +   T + FLDHML   + H   D+ V   GD+ +DDHH+ EDV + IG+A+LQALG R GI RFG    P+DE+L   ++DL GR       +     +   +T++V   F S+ +    +  I  L G N+ H+IEA  KAF
Sbjct:    4 ASTSAP----RQATVTRKTSETDISATLSLDGTGTSSIQTGVGFLDHMLTSFSRHSRIDLAVICKGDLEVDDHHSVEDVAIVIGSAILQALGSRAGIRRFGSALVPMDESLARAAVDLGGRSFAVVKAEFGRPVIQGMSTEMVGHFFTSIASGLKANIHIAVLDGHNTHHMIEAMFKAF 178          
BLAST of DY259991 vs. ExPASy Swiss-Prot
Match: HIS7_METM7 (Imidazoleglycerol-phosphate dehydratase OS=Methanococcus maripaludis (strain C7 / ATCC BAA-1331) GN=hisB PE=3 SV=1)

HSP 1 Score: 128.257 bits (321), Expect = 6.271e-29
Identity = 67/169 (39.64%), Postives = 101/169 (59.76%), Query Frame = 3
Query:  312 RIGEVKRVTKETNVSVKINVDGSGVADSSTCIPFLDHMLDQLASHGLFDVHVRATGDIHIDDHHTNEDVGLAIGTALLQALGDRKGINRFGDFTAPLDEALIHVSLDLSGRPHLNYDLQIPTQKVGTYNTQLVEPLFQSLVNTSGMDPSIQQLAGKNSSHIIEATLKAF 818
            R  +V R T ET + +++N+DG+G    +T I F DH+L   A HG FD+ +   GD+ IDDHHT EDVG+ +G A      ++K I RFG    P+DEA   VS+D+ GRP++  D    T+K+G ++T+ V   F+S  N + ++    ++ G+N  H +EA  KAF
Sbjct:    2 RAFKVTRDTNETKIHLELNIDGTGKYAITTGIAFFDHVLSSFAKHGAFDLKLDVLGDLEIDDHHTVEDVGIVLGKAFENM--EKKNIKRFGWAIIPMDEAKASVSVDIGGRPYVVGDYTPSTEKIGNFSTENVVHFFESFSNNAKINLHF-EVTGENEHHKVEALFKAF 167          
BLAST of DY259991 vs. ExPASy Swiss-Prot
Match: HIS7_DESDG (Imidazoleglycerol-phosphate dehydratase OS=Desulfovibrio desulfuricans (strain G20) GN=hisB PE=3 SV=1)

HSP 1 Score: 128.257 bits (321), Expect = 6.271e-29
Identity = 73/169 (43.20%), Postives = 93/169 (55.03%), Query Frame = 3
Query:  312 RIGEVKRVTKETNVSVKINVDGSGVADSSTCIPFLDHMLDQLASHGLFDVHVRATGDIHIDDHHTNEDVGLAIGTALLQALGDRKGINRFGDFTAPLDEALIHVSLDLSGRPHLNY--DLQIPTQKVGTYNTQLVEPLFQSLVNTSGMDPSIQQLAGKNSSHIIEATLK 812
            R   V R T ET +S+ + VDG G    +T   F DHML  L     FD+ +   GD H+D HHT ED GL +G A  QALGDRKGI R G+   P+DEAL  V LD+SGRP+L Y  D  +P    G     L    F+S  N + ++  I  L GKN  H++E+  K
Sbjct:    4 RAATVTRTTTETAISLSLTVDGKGEVSVTTGHGFTDHMLTLLGFWAGFDLTLTCNGDTHVDAHHTVEDAGLCLGQAFAQALGDRKGIARVGNARVPMDEALTEVDLDISGRPYLVYRGDELLPPVIAGD-EADLWREFFKSFANGARINLHISLLYGKNGHHLLESAFK 171          
BLAST of DY259991 vs. ExPASy Swiss-Prot
Match: HIS7_BUCAT (Histidine biosynthesis bifunctional protein hisB OS=Buchnera aphidicola subsp. Acyrthosiphon pisum (strain Tuc7) GN=hisB PE=3 SV=1)

HSP 1 Score: 128.257 bits (321), Expect = 6.271e-29
Identity = 69/177 (38.98%), Postives = 102/177 (57.63%), Query Frame = 3
Query:  288 TSSAVDSGRIGEVKRVTKETNVSVKINVDGSGVADSSTCIPFLDHMLDQLASHGLFDVHVRATGDIHIDDHHTNEDVGLAIGTALLQALGDRKGINRFGDFTAPLDEALIHVSLDLSGRPHLNYDLQIPTQKVGTYNTQLVEPLFQSLVNTSGMDPSIQQLAGKNSSHIIEATLKAF 818
            T   +   R  E+ R TKET VS+K+ +D    +   T + F DHML+QL+ H    +++   GD+ IDDHHT ED G+ +G ALLQALG + G++RFG F  P+DE+  +  +D+S RP+LN+  +   +  G  +T +VE  F SL  +  +   +    GKN  H IE+  K F
Sbjct:  157 TKYIIKHNRYAEIIRRTKETKVSIKVWLDLEETSKIDTGVKFFDHMLEQLSVHSGICMNISVQGDLDIDDHHTIEDTGIVLGEALLQALGKKNGLSRFG-FYLPMDESRSNCIMDISNRPYLNFKAKFNHKMAGDLSTNMVEHFFYSLCYSMKITLHL-YAEGKNDHHCIESLFKVF 331          
BLAST of DY259991 vs. ExPASy Swiss-Prot
Match: HIS7_BUCAI (Histidine biosynthesis bifunctional protein hisB OS=Buchnera aphidicola subsp. Acyrthosiphon pisum GN=hisB PE=3 SV=1)

HSP 1 Score: 128.257 bits (321), Expect = 6.271e-29
Identity = 69/177 (38.98%), Postives = 102/177 (57.63%), Query Frame = 3
Query:  288 TSSAVDSGRIGEVKRVTKETNVSVKINVDGSGVADSSTCIPFLDHMLDQLASHGLFDVHVRATGDIHIDDHHTNEDVGLAIGTALLQALGDRKGINRFGDFTAPLDEALIHVSLDLSGRPHLNYDLQIPTQKVGTYNTQLVEPLFQSLVNTSGMDPSIQQLAGKNSSHIIEATLKAF 818
            T   +   R  E+ R TKET VS+K+ +D    +   T + F DHML+QL+ H    +++   GD+ IDDHHT ED G+ +G ALLQALG + G++RFG F  P+DE+  +  +D+S RP+LN+  +   +  G  +T +VE  F SL  +  +   +    GKN  H IE+  K F
Sbjct:  157 TKYIIKHNRYAEIIRRTKETKVSIKVWLDLEETSKIDTGVKFFDHMLEQLSVHSGICMNISVQGDLDIDDHHTIEDTGIVLGEALLQALGKKNGLSRFG-FYLPMDESRSNCIMDISNRPYLNFKAKFNHKMAGDLSTNMVEHFFYSLCYSMKITLHL-YAEGKNDHHCIESLFKVF 331          
BLAST of DY259991 vs. ExPASy Swiss-Prot
Match: HIS7_BUCA5 (Histidine biosynthesis bifunctional protein hisB OS=Buchnera aphidicola subsp. Acyrthosiphon pisum (strain 5A) GN=hisB PE=3 SV=1)

HSP 1 Score: 128.257 bits (321), Expect = 6.271e-29
Identity = 69/177 (38.98%), Postives = 102/177 (57.63%), Query Frame = 3
Query:  288 TSSAVDSGRIGEVKRVTKETNVSVKINVDGSGVADSSTCIPFLDHMLDQLASHGLFDVHVRATGDIHIDDHHTNEDVGLAIGTALLQALGDRKGINRFGDFTAPLDEALIHVSLDLSGRPHLNYDLQIPTQKVGTYNTQLVEPLFQSLVNTSGMDPSIQQLAGKNSSHIIEATLKAF 818
            T   +   R  E+ R TKET VS+K+ +D    +   T + F DHML+QL+ H    +++   GD+ IDDHHT ED G+ +G ALLQALG + G++RFG F  P+DE+  +  +D+S RP+LN+  +   +  G  +T +VE  F SL  +  +   +    GKN  H IE+  K F
Sbjct:  157 TKYIIKHNRYAEIIRRTKETKVSIKVWLDLEETSKIDTGVKFFDHMLEQLSVHSGICMNISVQGDLDIDDHHTIEDTGIVLGEALLQALGKKNGLSRFG-FYLPMDESRSNCIMDISNRPYLNFKAKFNHKMAGDLSTNMVEHFFYSLCYSMKITLHL-YAEGKNDHHCIESLFKVF 331          
BLAST of DY259991 vs. ExPASy Swiss-Prot
Match: HIS7_BIFAA (Imidazoleglycerol-phosphate dehydratase OS=Bifidobacterium adolescentis (strain ATCC 15703 / DSM 20083) GN=hisB PE=3 SV=1)

HSP 1 Score: 128.257 bits (321), Expect = 6.271e-29
Identity = 66/172 (38.37%), Postives = 98/172 (56.98%), Query Frame = 3
Query:  312 RIGEVKRVTKETNVSVKINVDGSGVADSSTCIPFLDHMLDQLASHGLFDVHVRATGDIHIDDHHTNEDVGLAIGTALLQALGDRKGINRFGDFTAPLDEALIHVSLDLSGRPHLNYDLQIPTQKV----GTYNTQLVEPLFQSLVNTSGMDPSIQQLAGKNSSHIIEATLKA 815
            R   + R T E+ V + +N+DG+G  D  T +PF +HM+  L  H L D+ ++ATGD  ID HHT ED+ +  G AL QALGD++GI RF D T PLDEAL    +D+SGRP+     +    +     G +   LV  + +S+   +G+   +  ++G++  HI E   KA
Sbjct:    3 RTATIVRETSESKVELSLNLDGTGKTDIDTSVPFYNHMMTALGKHSLIDLKIKATGDTDIDAHHTVEDIAIVFGEALKQALGDKRGIRRFADATVPLDEALAKAVVDISGRPYCVCTGEPEGFEYCMIGGHFTGSLVRHVMESIAMHAGICLHLHVISGRDPHHIAEVEFKA 174          
BLAST of DY259991 vs. ExPASy Swiss-Prot
Match: HIS7_BACCR (Imidazoleglycerol-phosphate dehydratase OS=Bacillus cereus (strain ATCC 14579 / DSM 31) GN=hisB PE=3 SV=1)

HSP 1 Score: 128.257 bits (321), Expect = 6.271e-29
Identity = 62/163 (38.04%), Postives = 98/163 (60.12%), Query Frame = 3
Query:  330 RVTKETNVSVKINVDGSGVADSSTCIPFLDHMLDQLASHGLFDVHVRATGDIHIDDHHTNEDVGLAIGTALLQALGDRKGINRFGDFTAPLDEALIHVSLDLSGRPHLNYDLQIPTQKVGTYNTQLVEPLFQSLVNTSGMDPSIQQLAGKNSSHIIEATLKAF 818
            R T ET + + + +D S      T + F DHML   A HG F + V A GD+ +D HHT EDVG+ +G  L +AL +++GINR+G    P+DE+L  V++D+SGR +  +  ++   K+G ++T+L E  F+++ + + +    + L G N+ H IEA  KAF
Sbjct:    8 RETTETKIKLNLQLDESTNVSIQTGVGFFDHMLTLFARHGRFGLQVEAEGDVFVDAHHTVEDVGIVLGNCLKEALQNKEGINRYGSAYVPMDESLGFVAIDISGRSYCVFQGELTNPKLGDFDTELTEEFFRAVAHAANITLHARVLYGSNTHHKIEALFKAF 170          
The following BLAST results are available for this feature:
BLAST of DY259991 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
HIS7_LEUMM4.801e-2937.50Imidazoleglycerol-phosphate dehydratase OS=Leucono... [more]
HIS7_BUCAP4.801e-2939.57Histidine biosynthesis bifunctional protein hisB O... [more]
HIS7_PELLD6.271e-2939.11Imidazoleglycerol-phosphate dehydratase OS=Pelodic... [more]
HIS7_METM76.271e-2939.64Imidazoleglycerol-phosphate dehydratase OS=Methano... [more]
HIS7_DESDG6.271e-2943.20Imidazoleglycerol-phosphate dehydratase OS=Desulfo... [more]
HIS7_BUCAT6.271e-2938.98Histidine biosynthesis bifunctional protein hisB O... [more]
HIS7_BUCAI6.271e-2938.98Histidine biosynthesis bifunctional protein hisB O... [more]
HIS7_BUCA56.271e-2938.98Histidine biosynthesis bifunctional protein hisB O... [more]
HIS7_BIFAA6.271e-2938.37Imidazoleglycerol-phosphate dehydratase OS=Bifidob... [more]
HIS7_BACCR6.271e-2938.04Imidazoleglycerol-phosphate dehydratase OS=Bacillu... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAP10YN21FM1 Fruit-TF Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY259991 ID=DY259991; Name=DY259991; organism=Citrus clementina; type=EST; length=917bp
GCTGCGTTTTGGCATATAGCCGTGTTGGCGTTGCTACTCTCTCTGCGACA
TTGGAAACGATAGTGTGTAAAATGGAGCTCTCGGTCCCAGCTCGCCTTGT
TCACCTTTCAATCTCGTCCACGTCCTCACGCCGGCTCCTCGTTAAACCAA
AAACCAATCTCTCTCGTAAACTTCTCCCCATCTCCACACAATACTGCTCC
TCAACGCGCCGCATGAACTCCCTCACAACACCACGCGCCTCTCTAAACCC
AGACGGCGACAGCAAACACAACAACGGGTCCGCCTCAACTTCCTCTGCCG
TCGATTCTGGTCGAATTGGGGAAGTGAAAAGAGTCACGAAAGAGACCAAC
GTTTCTGTGAAGATTAACGTCGATGGCTCTGGCGTTGCTGATTCATCCAC
TTGCATTCCCTTCCTAGATCACATGCTTGATCAACTGGCTTCGCACGGGC
TATTTGATGTGCACGTGAGGGCAACCGGAGACATTCACATTGATGATCAT
CATACCAATGAAGACGTTGGGCTTGCCATTGGCACGGCATTGCTGCAAGC
TCTTGGTGATAGGAAAGGAATTAATCGGTTTGGTGATTTTACAGCTCCTC
TTGATGAAGCTTTGATTCATGTTTCATTGGATTTATCTGGACGGCCACAT
TTAAATTATGATTTGCAAATTCCCACACAGAAAGTTGGAACTTACAACAC
TCAATTGGTGGAACCACTTTTCCAATCCTTGGTGAACACTTCTGGGATGG
ACCCTTCCATTCAACAGCTTGCTGGAAAAAATTCCTCTCACATTATTGAG
GCAACCCTCAAAGCTTTTTGCTAGGGCTCTCCGAAAAGCAACAAAATTAG
GACCCCGTCGCCGTGGAAATATACCCAACCTCAAAGGGGGTTCTCCAACA
TCTTGGAATCTCGACGG
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