DY259991

Overview
NameDY259991
Unique NameDY259991
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length917
Libraries
Library NameType
Fruit-TFcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig1388 contig Ccv1_Contig1388:1..916. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of DY259991 vs. ExPASy Swiss-Prot
Match: HIS7_AKKM8 (Imidazoleglycerol-phosphate dehydratase OS=Akkermansia muciniphila (strain ATCC BAA-835) GN=hisB PE=3 SV=1)

HSP 1 Score: 125.946 bits (315), Expect = 3.112e-28
Identity = 68/170 (40.00%), Postives = 101/170 (59.41%), Query Frame = 3
Query:  312 RIGEVKRVTKETNVSVKINVDGSGVADSSTCIPFLDHMLDQLASHGLFDVHVRATGDIHIDDHHTNEDVGLAIGTALLQALGDRKGINRFGDFTAPLDEALIHVSLDLSGRPHLNYDLQIP---TQKVGTYNTQLVEPLFQSLVNTSGMDPSIQQLAGKNSSHIIEATLK 812
            R    KRVT ET++S+++N+DG+G A  +T   F DHMLD LA H L D+ ++A GD+ +D HHT EDVG+ +G  +  ALGD+KGI R+G    P+DE L  V +DLS RP++ +  +IP         +   L E   ++L N    +  ++ L G++  HI E+  K
Sbjct:    2 RNASCKRVTGETDISMELNLDGTGCAAVATGHAFFDHMLDLLARHSLMDLTLQARGDLEVDAHHTVEDVGIVLGECIKNALGDKKGIVRYGCSYLPMDETLTRVVMDLSNRPYVAF--RIPEGGLPDAPNFPLTLCEEFCRALANNLRCNLHVEVLYGRDGHHIAESVFK 169          
BLAST of DY259991 vs. ExPASy Swiss-Prot
Match: HIS7_STAAR (Imidazoleglycerol-phosphate dehydratase OS=Staphylococcus aureus (strain MRSA252) GN=hisB PE=3 SV=1)

HSP 1 Score: 125.561 bits (314), Expect = 4.065e-28
Identity = 64/168 (38.10%), Postives = 103/168 (61.31%), Query Frame = 3
Query:  315 IGEVKRVTKETNVSVKINVDGSGVADSSTCIPFLDHMLDQLASHGLFDVHVRATGDIHIDDHHTNEDVGLAIGTALLQALGDRKGINRFGDFTAPLDEALIHVSLDLSGRPHLNYDLQIPTQKVGTYNTQLVEPLFQSLVNTSGMDPSIQQLAGKNSSHIIEATLKAF 818
            I + +R T ET +++ I+ D S  +  +T + FL+HML     H    +++ A GDI +DDHH  ED+G+ IG  LL+ + D+K   R+G     +DE L  V +D+SGRP+L+++  +  +KVGT++T+LVE  F+++V  + +   I  + G N+ H IEA  KAF
Sbjct:    2 IYQKQRNTAETQLNISISDDQSP-SHINTGVGFLNHMLTLFTFHSGLSLNIEAQGDIDVDDHHVTEDIGIVIGQLLLEMIKDKKHFVRYGTMYISMDETLARVVVDISGRPYLSFNATLSKEKVGTFDTELVEEFFRAVVINARLTTHIDLIRGGNTHHEIEAIFKAF 168          
BLAST of DY259991 vs. ExPASy Swiss-Prot
Match: HIS7_METM5 (Imidazoleglycerol-phosphate dehydratase OS=Methanococcus maripaludis (strain C5 / ATCC BAA-1333) GN=hisB PE=3 SV=1)

HSP 1 Score: 125.561 bits (314), Expect = 4.065e-28
Identity = 66/169 (39.05%), Postives = 100/169 (59.17%), Query Frame = 3
Query:  312 RIGEVKRVTKETNVSVKINVDGSGVADSSTCIPFLDHMLDQLASHGLFDVHVRATGDIHIDDHHTNEDVGLAIGTALLQALGDRKGINRFGDFTAPLDEALIHVSLDLSGRPHLNYDLQIPTQKVGTYNTQLVEPLFQSLVNTSGMDPSIQQLAGKNSSHIIEATLKAF 818
            R  +V R T ET + +++N+DG+G     T I F DH+L   A HG FD+ +   GD+ IDDHHT EDVG+ +G A      ++K I RFG    P+DEA   VS+D+ GRP++  +    T+K+G ++T+ V   F+S  N + ++    ++ G+N  H +EA  KAF
Sbjct:    2 RAFKVTRDTNETKIHLELNIDGTGKYAIKTGIAFFDHVLSSFAKHGAFDLKLDVLGDLEIDDHHTVEDVGIVLGKAFENM--EKKNIKRFGWAIIPMDEAKATVSIDIGGRPYVVGNYTPNTEKIGNFSTENVVHFFESFSNNAKINLHF-EVTGENEHHKVEALFKAF 167          
BLAST of DY259991 vs. ExPASy Swiss-Prot
Match: HIS7_BACC2 (Imidazoleglycerol-phosphate dehydratase OS=Bacillus cereus (strain G9842) GN=hisB PE=3 SV=1)

HSP 1 Score: 125.561 bits (314), Expect = 4.065e-28
Identity = 62/163 (38.04%), Postives = 97/163 (59.51%), Query Frame = 3
Query:  330 RVTKETNVSVKINVDGSGVADSSTCIPFLDHMLDQLASHGLFDVHVRATGDIHIDDHHTNEDVGLAIGTALLQALGDRKGINRFGDFTAPLDEALIHVSLDLSGRPHLNYDLQIPTQKVGTYNTQLVEPLFQSLVNTSGMDPSIQQLAGKNSSHIIEATLKAF 818
            R T ET + + + +D S      T I F DHML   A HG F + V A GD+ +D HHT EDVG+ +G  L +AL +++ INR+G    P+DE+L  V++D+SGR +  +  ++   K+G ++T+L E  F+++ + + +    + L G N+ H IEA  KAF
Sbjct:    8 RQTTETKIKLSLQLDESTNVSIQTGIGFFDHMLTLFARHGRFGLQVEAEGDVFVDAHHTVEDVGIVLGNCLKEALQNKERINRYGSAYVPMDESLGFVAIDISGRSYCVFQGELTNPKLGDFDTELTEEFFRAVAHAANITLHARVLYGSNTHHKIEALFKAF 170          
BLAST of DY259991 vs. ExPASy Swiss-Prot
Match: HIS7_SULIN (Imidazoleglycerol-phosphate dehydratase OS=Sulfolobus islandicus (strain Y.N.15.51 / Yellowstone #2) GN=hisB PE=3 SV=1)

HSP 1 Score: 125.176 bits (313), Expect = 5.308e-28
Identity = 68/168 (40.48%), Postives = 96/168 (57.14%), Query Frame = 3
Query:  312 RIGEVKRVTKETNVSVKINVDGSGVADSSTCIPFLDHMLDQLASHGLFDVHVRATGDIHIDDHHTNEDVGLAIGTALLQALGDRKGINRFGDFTAPLDEALIHVSLDLSGRPHLNYDLQIPTQKVGTYNTQLVEPLFQSLVNTSGMDPSIQQLAGKNSSHIIEATLKA 815
            R   + R TKET + V +++D  G    ST +PF +HML  L ++      V AT  +  DDHH  EDV + +G A+ +ALGD++GI RF     P+DEAL+ VSLD+S R      L +   ++G   T+ +   FQS    SG+   I QL+G N+ HIIEA+ KA
Sbjct:    3 RNANITRETKETKIEVFLDIDRKGEIKVSTPVPFFNHMLITLLTYMNSTATVSATDKLPYDDHHIIEDVAITLGLAIKEALGDKRGIKRFSHQIIPMDEALVLVSLDISNRGMAFVSLNLKRSEIGGLATENIPHFFQSFAYNSGVTLHISQLSGYNTHHIIEASFKA 170          
BLAST of DY259991 vs. ExPASy Swiss-Prot
Match: HIS7_SULIM (Imidazoleglycerol-phosphate dehydratase OS=Sulfolobus islandicus (strain M.14.25 / Kamchatka #1) GN=hisB PE=3 SV=1)

HSP 1 Score: 125.176 bits (313), Expect = 5.308e-28
Identity = 68/168 (40.48%), Postives = 97/168 (57.74%), Query Frame = 3
Query:  312 RIGEVKRVTKETNVSVKINVDGSGVADSSTCIPFLDHMLDQLASHGLFDVHVRATGDIHIDDHHTNEDVGLAIGTALLQALGDRKGINRFGDFTAPLDEALIHVSLDLSGRPHLNYDLQIPTQKVGTYNTQLVEPLFQSLVNTSGMDPSIQQLAGKNSSHIIEATLKA 815
            R   + R TKET + V +++D  G    ST +PF +HML  L ++      V AT  +  DDHH  EDV + +G A+ +ALGD++GI RF     P+DEAL+ VSLD+S R     +L +   ++G   T+ +   FQS    SG+   I QL+G N+ HIIEA+ KA
Sbjct:    3 RNANITRETKETKIEVFLDIDRKGEIKVSTPVPFFNHMLITLLTYMNSTATVSATDKLPYDDHHIIEDVAITLGLAIKEALGDKRGIKRFSHQIIPMDEALVLVSLDISNRGIAFVNLNLKRSEIGGLATENIPHFFQSFAYNSGVTLHISQLSGYNTHHIIEASFKA 170          
BLAST of DY259991 vs. ExPASy Swiss-Prot
Match: HIS7_SULIL (Imidazoleglycerol-phosphate dehydratase OS=Sulfolobus islandicus (strain L.S.2.15 / Lassen #1) GN=hisB PE=3 SV=1)

HSP 1 Score: 125.176 bits (313), Expect = 5.308e-28
Identity = 68/168 (40.48%), Postives = 96/168 (57.14%), Query Frame = 3
Query:  312 RIGEVKRVTKETNVSVKINVDGSGVADSSTCIPFLDHMLDQLASHGLFDVHVRATGDIHIDDHHTNEDVGLAIGTALLQALGDRKGINRFGDFTAPLDEALIHVSLDLSGRPHLNYDLQIPTQKVGTYNTQLVEPLFQSLVNTSGMDPSIQQLAGKNSSHIIEATLKA 815
            R   + R TKET + V +++D  G    ST +PF +HML  L ++      V AT  +  DDHH  EDV + +G A+ +ALGD++GI RF     P+DEAL+ VSLD+S R      L +   ++G   T+ +   FQS    SG+   I QL+G N+ HIIEA+ KA
Sbjct:    3 RNANITRETKETKIEVFLDIDRKGEIKVSTPVPFFNHMLITLLTYMNSTATVSATDKLPYDDHHIIEDVAITLGLAIKEALGDKRGIKRFSHQIIPMDEALVLVSLDISNRGMAFVSLNLKRSEIGGLATENIPHFFQSFAYNSGVTLHISQLSGYNTHHIIEASFKA 170          
BLAST of DY259991 vs. ExPASy Swiss-Prot
Match: HIS7_SULIK (Imidazoleglycerol-phosphate dehydratase OS=Sulfolobus islandicus (strain M.16.4 / Kamchatka #3) GN=hisB PE=3 SV=1)

HSP 1 Score: 125.176 bits (313), Expect = 5.308e-28
Identity = 68/168 (40.48%), Postives = 97/168 (57.74%), Query Frame = 3
Query:  312 RIGEVKRVTKETNVSVKINVDGSGVADSSTCIPFLDHMLDQLASHGLFDVHVRATGDIHIDDHHTNEDVGLAIGTALLQALGDRKGINRFGDFTAPLDEALIHVSLDLSGRPHLNYDLQIPTQKVGTYNTQLVEPLFQSLVNTSGMDPSIQQLAGKNSSHIIEATLKA 815
            R   + R TKET + V +++D  G    ST +PF +HML  L ++      V AT  +  DDHH  EDV + +G A+ +ALGD++GI RF     P+DEAL+ VSLD+S R     +L +   ++G   T+ +   FQS    SG+   I QL+G N+ HIIEA+ KA
Sbjct:    3 RNANITRETKETKIEVFLDIDRKGEIKVSTPVPFFNHMLITLLTYMNSTATVSATDKLPYDDHHIIEDVAITLGLAIKEALGDKRGIKRFSHQIIPMDEALVLVSLDISNRGIAFVNLNLKRSEIGGLATENIPHFFQSFAYNSGVTLHISQLSGYNTHHIIEASFKA 170          
BLAST of DY259991 vs. ExPASy Swiss-Prot
Match: HIS7_METM6 (Imidazoleglycerol-phosphate dehydratase OS=Methanococcus maripaludis (strain C6 / ATCC BAA-1332) GN=hisB PE=3 SV=1)

HSP 1 Score: 125.176 bits (313), Expect = 5.308e-28
Identity = 66/169 (39.05%), Postives = 100/169 (59.17%), Query Frame = 3
Query:  312 RIGEVKRVTKETNVSVKINVDGSGVADSSTCIPFLDHMLDQLASHGLFDVHVRATGDIHIDDHHTNEDVGLAIGTALLQALGDRKGINRFGDFTAPLDEALIHVSLDLSGRPHLNYDLQIPTQKVGTYNTQLVEPLFQSLVNTSGMDPSIQQLAGKNSSHIIEATLKAF 818
            R  +V R T ET + +++N+DG+G    +T I F DH+L   A HG FD+ +   GD+ IDDHHT EDVG+ +G A      ++K I RFG    P+DEA   VS+D+ GRP++       T+K+G ++T+ V   F+S  N + ++    ++ G+N  H +EA  KAF
Sbjct:    2 RAFKVTRDTNETKIHLELNIDGTGKYAITTGIAFFDHVLSSFAKHGAFDLKLDVLGDLEIDDHHTVEDVGIVLGKAFENM--EKKNIKRFGWAIIPMDEAKATVSIDIGGRPYVVGGYTPNTEKIGNFSTENVVHFFESFSNNAKINLHF-EVTGENEHHKVEALFKAF 167          
BLAST of DY259991 vs. ExPASy Swiss-Prot
Match: HIS7_SULSO (Imidazoleglycerol-phosphate dehydratase OS=Sulfolobus solfataricus GN=hisB PE=3 SV=1)

HSP 1 Score: 124.79 bits (312), Expect = 6.933e-28
Identity = 69/168 (41.07%), Postives = 96/168 (57.14%), Query Frame = 3
Query:  312 RIGEVKRVTKETNVSVKINVDGSGVADSSTCIPFLDHMLDQLASHGLFDVHVRATGDIHIDDHHTNEDVGLAIGTALLQALGDRKGINRFGDFTAPLDEALIHVSLDLSGRPHLNYDLQIPTQKVGTYNTQLVEPLFQSLVNTSGMDPSIQQLAGKNSSHIIEATLKA 815
            R   + R TKET + V +++D  G    ST IPF +HML  L ++      V AT  +  DDHH  EDV + +G A+  ALGD++GI RF     P+D+AL+ VSLD+S R     +L +   ++G   T+ V   FQS    SG+   I QL+G N+ HIIEA+ KA
Sbjct:    3 RSANITRETKETKIEVLLDIDRKGEVKVSTPIPFFNHMLITLLTYMNSTAIVSATDKLPYDDHHIVEDVAITLGLAIKTALGDKRGIKRFSHQIIPMDDALVLVSLDISNRGMAFVNLNLKRSEIGGLATENVPHFFQSFAYNSGITLHISQLSGYNTHHIIEASFKA 170          
The following BLAST results are available for this feature:
BLAST of DY259991 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
HIS7_AKKM83.112e-2840.00Imidazoleglycerol-phosphate dehydratase OS=Akkerma... [more]
HIS7_STAAR4.065e-2838.10Imidazoleglycerol-phosphate dehydratase OS=Staphyl... [more]
HIS7_METM54.065e-2839.05Imidazoleglycerol-phosphate dehydratase OS=Methano... [more]
HIS7_BACC24.065e-2838.04Imidazoleglycerol-phosphate dehydratase OS=Bacillu... [more]
HIS7_SULIN5.308e-2840.48Imidazoleglycerol-phosphate dehydratase OS=Sulfolo... [more]
HIS7_SULIM5.308e-2840.48Imidazoleglycerol-phosphate dehydratase OS=Sulfolo... [more]
HIS7_SULIL5.308e-2840.48Imidazoleglycerol-phosphate dehydratase OS=Sulfolo... [more]
HIS7_SULIK5.308e-2840.48Imidazoleglycerol-phosphate dehydratase OS=Sulfolo... [more]
HIS7_METM65.308e-2839.05Imidazoleglycerol-phosphate dehydratase OS=Methano... [more]
HIS7_SULSO6.933e-2841.07Imidazoleglycerol-phosphate dehydratase OS=Sulfolo... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAP10YN21FM1 Fruit-TF Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY259991 ID=DY259991; Name=DY259991; organism=Citrus clementina; type=EST; length=917bp
GCTGCGTTTTGGCATATAGCCGTGTTGGCGTTGCTACTCTCTCTGCGACA
TTGGAAACGATAGTGTGTAAAATGGAGCTCTCGGTCCCAGCTCGCCTTGT
TCACCTTTCAATCTCGTCCACGTCCTCACGCCGGCTCCTCGTTAAACCAA
AAACCAATCTCTCTCGTAAACTTCTCCCCATCTCCACACAATACTGCTCC
TCAACGCGCCGCATGAACTCCCTCACAACACCACGCGCCTCTCTAAACCC
AGACGGCGACAGCAAACACAACAACGGGTCCGCCTCAACTTCCTCTGCCG
TCGATTCTGGTCGAATTGGGGAAGTGAAAAGAGTCACGAAAGAGACCAAC
GTTTCTGTGAAGATTAACGTCGATGGCTCTGGCGTTGCTGATTCATCCAC
TTGCATTCCCTTCCTAGATCACATGCTTGATCAACTGGCTTCGCACGGGC
TATTTGATGTGCACGTGAGGGCAACCGGAGACATTCACATTGATGATCAT
CATACCAATGAAGACGTTGGGCTTGCCATTGGCACGGCATTGCTGCAAGC
TCTTGGTGATAGGAAAGGAATTAATCGGTTTGGTGATTTTACAGCTCCTC
TTGATGAAGCTTTGATTCATGTTTCATTGGATTTATCTGGACGGCCACAT
TTAAATTATGATTTGCAAATTCCCACACAGAAAGTTGGAACTTACAACAC
TCAATTGGTGGAACCACTTTTCCAATCCTTGGTGAACACTTCTGGGATGG
ACCCTTCCATTCAACAGCTTGCTGGAAAAAATTCCTCTCACATTATTGAG
GCAACCCTCAAAGCTTTTTGCTAGGGCTCTCCGAAAAGCAACAAAATTAG
GACCCCGTCGCCGTGGAAATATACCCAACCTCAAAGGGGGTTCTCCAACA
TCTTGGAATCTCGACGG
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