DY259991

Overview
NameDY259991
Unique NameDY259991
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length917
Libraries
Library NameType
Fruit-TFcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig1388 contig Ccv1_Contig1388:1..916. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of DY259991 vs. ExPASy Swiss-Prot
Match: HIS7_POLSJ (Imidazoleglycerol-phosphate dehydratase OS=Polaromonas sp. (strain JS666 / ATCC BAA-500) GN=hisB PE=3 SV=1)

HSP 1 Score: 163.31 bits (412), Expect = 1.246e-42
Identity = 81/169 (47.93%), Postives = 107/169 (63.31%), Query Frame = 3
Query:  312 RIGEVKRVTKETNVSVKINVDGSGVADSSTCIPFLDHMLDQLASHGLFDVHVRATGDIHIDDHHTNEDVGLAIGTALLQALGDRKGINRFGDFTAPLDEALIHVSLDLSGRPHLNYDLQIPTQKVGTYNTQLVEPLFQSLVNTSGMDPSIQQLAGKNSSHIIEATLKAF 818
            R  EV R T ET ++VK+N+DG+G A  ST I F DHMLDQ+A HGL D+ ++A GD+HID HHT EDVG+  G A+ QA+GD+KG+ R+G    PLDEAL  V +D SGRP L   +   +  +GT+++QL    FQ   N + +   I  L G N+ H  E   KAF
Sbjct:   13 RKAEVSRNTAETQITVKLNLDGTGKASLSTGIGFFDHMLDQIARHGLIDLDIQAKGDLHIDGHHTVEDVGITFGQAVAQAVGDKKGLRRYGHAYVPLDEALSRVVIDFSGRPGLEMHVPFKSGMIGTFDSQLAYEFFQGFANHAFVTLHIDNLRGDNAHHQAETVFKAF 181          

HSP 2 Score: 31.9574 bits (71), Expect = 1.246e-42
Identity = 15/26 (57.69%), Postives = 18/26 (69.23%), Query Frame = 1
Query:  811 KLFARALRKATKLGPRRRGNIPNLKG 888
            K FARALR A ++ PR  G IP+ KG
Sbjct:  179 KAFARALRMALEIDPRSAGVIPSTKG 204          
BLAST of DY259991 vs. ExPASy Swiss-Prot
Match: HIS7_RALPJ (Imidazoleglycerol-phosphate dehydratase OS=Ralstonia pickettii (strain 12J) GN=hisB PE=3 SV=1)

HSP 1 Score: 163.31 bits (412), Expect = 1.248e-42
Identity = 81/169 (47.93%), Postives = 108/169 (63.91%), Query Frame = 3
Query:  312 RIGEVKRVTKETNVSVKINVDGSGVADSSTCIPFLDHMLDQLASHGLFDVHVRATGDIHIDDHHTNEDVGLAIGTALLQALGDRKGINRFGDFTAPLDEALIHVSLDLSGRPHLNYDLQIPTQKVGTYNTQLVEPLFQSLVNTSGMDPSIQQLAGKNSSHIIEATLKAF 818
            R  EV R T ET + V +++DG+G    +T +PFLDHMLDQ+A HG+ D+ V ATGD HIDDHHT EDVG+ +G A+ +A+GD+KGI R+G    PLDEAL  V +D SGRP L + +     +VG ++  L    F+  VN +G+   I  L G N+ H IE   KAF
Sbjct:    3 RRAEVTRNTSETQIRVALDLDGTGKQTLNTGVPFLDHMLDQIARHGMVDLDVSATGDTHIDDHHTVEDVGITLGQAVAKAIGDKKGIVRYGHSYVPLDEALSRVVIDFSGRPGLEFHVPFTRARVGNFDVDLSIEFFRGFVNHAGVTLHIDNLRGVNAHHQIETVFKAF 171          

HSP 2 Score: 31.9574 bits (71), Expect = 1.248e-42
Identity = 14/26 (53.85%), Postives = 17/26 (65.38%), Query Frame = 1
Query:  811 KLFARALRKATKLGPRRRGNIPNLKG 888
            K F RALR A ++ PR  G IP+ KG
Sbjct:  169 KAFGRALRMAVEIDPRAAGTIPSTKG 194          
BLAST of DY259991 vs. ExPASy Swiss-Prot
Match: HIS7_DIAST (Imidazoleglycerol-phosphate dehydratase OS=Diaphorobacter sp. (strain TPSY) GN=hisB PE=3 SV=1)

HSP 1 Score: 164.466 bits (415), Expect = 1.624e-42
Identity = 81/177 (45.76%), Postives = 109/177 (61.58%), Query Frame = 3
Query:  288 TSSAVDSGRIGEVKRVTKETNVSVKINVDGSGVADSSTCIPFLDHMLDQLASHGLFDVHVRATGDIHIDDHHTNEDVGLAIGTALLQALGDRKGINRFGDFTAPLDEALIHVSLDLSGRPHLNYDLQIPTQKVGTYNTQLVEPLFQSLVNTSGMDPSIQQLAGKNSSHIIEATLKAF 818
            +S+ +   R  EV R T ET ++V++N+DG+G A   T I F DHMLDQ+A HGL D+ +   GD+HID HHT EDVG+ +G A  +A+GD+KGI R+G    PLDEAL  V +D SGRP L+  +      +G ++TQL    FQ  VN +G+   I  L G N+ H  E   KAF
Sbjct:    9 SSAELCPDRTAEVSRTTAETRITVRVNLDGTGAASLHTGIGFFDHMLDQIARHGLIDLQIDCDGDLHIDGHHTVEDVGITLGQAFARAVGDKKGIRRYGHAYVPLDEALSRVVVDFSGRPGLHLHIPFTAGSIGGFDTQLTYEFFQGFVNHAGVTLHIDNLKGINAHHQCETVFKAF 185          

HSP 2 Score: 30.4166 bits (67), Expect = 1.624e-42
Identity = 15/26 (57.69%), Postives = 17/26 (65.38%), Query Frame = 1
Query:  811 KLFARALRKATKLGPRRRGNIPNLKG 888
            K FARALR A +  PR  G IP+ KG
Sbjct:  183 KAFARALRAALERDPRAAGVIPSTKG 208          
BLAST of DY259991 vs. ExPASy Swiss-Prot
Match: HIS7_ACISJ (Imidazoleglycerol-phosphate dehydratase OS=Acidovorax sp. (strain JS42) GN=hisB PE=3 SV=1)

HSP 1 Score: 164.466 bits (415), Expect = 1.624e-42
Identity = 81/177 (45.76%), Postives = 109/177 (61.58%), Query Frame = 3
Query:  288 TSSAVDSGRIGEVKRVTKETNVSVKINVDGSGVADSSTCIPFLDHMLDQLASHGLFDVHVRATGDIHIDDHHTNEDVGLAIGTALLQALGDRKGINRFGDFTAPLDEALIHVSLDLSGRPHLNYDLQIPTQKVGTYNTQLVEPLFQSLVNTSGMDPSIQQLAGKNSSHIIEATLKAF 818
            +S+ +   R  EV R T ET ++V++N+DG+G A   T I F DHMLDQ+A HGL D+ +   GD+HID HHT EDVG+ +G A  +A+GD+KGI R+G    PLDEAL  V +D SGRP L+  +      +G ++TQL    FQ  VN +G+   I  L G N+ H  E   KAF
Sbjct:    9 SSAELCPDRTAEVSRTTAETRITVRVNLDGTGAASLHTGIGFFDHMLDQIARHGLIDLQIDCDGDLHIDGHHTVEDVGITLGQAFARAVGDKKGIRRYGHAYVPLDEALSRVVVDFSGRPGLHLHIPFTAGSIGGFDTQLTYEFFQGFVNHAGVTLHIDNLKGINAHHQCETVFKAF 185          

HSP 2 Score: 30.4166 bits (67), Expect = 1.624e-42
Identity = 15/26 (57.69%), Postives = 17/26 (65.38%), Query Frame = 1
Query:  811 KLFARALRKATKLGPRRRGNIPNLKG 888
            K FARALR A +  PR  G IP+ KG
Sbjct:  183 KAFARALRAALERDPRAAGVIPSTKG 208          
BLAST of DY259991 vs. ExPASy Swiss-Prot
Match: HIS7_GEOMG (Imidazoleglycerol-phosphate dehydratase OS=Geobacter metallireducens (strain GS-15 / ATCC 53774 / DSM 7210) GN=hisB PE=3 SV=1)

HSP 1 Score: 173.326 bits (438), Expect = 1.700e-42
Identity = 80/169 (47.34%), Postives = 115/169 (68.05%), Query Frame = 3
Query:  312 RIGEVKRVTKETNVSVKINVDGSGVADSSTCIPFLDHMLDQLASHGLFDVHVRATGDIHIDDHHTNEDVGLAIGTALLQALGDRKGINRFGDFTAPLDEALIHVSLDLSGRPHLNYDLQIPTQKVGTYNTQLVEPLFQSLVNTSGMDPSIQQLAGKNSSHIIEATLKAF 818
            R   ++RVTKET + + + +DG+G A   T +PFLDHMLD  A HGLF++ V A GDI ID HHT ED+G+ +G AL +ALGD+KGI R+G  + P+DE L  V++D+SGRP+L Y + +P  K+G ++ +LV   FQ++VN  G +  +  + G N  H++EA  KAF
Sbjct:    3 RKATIERVTKETQIKLSLEIDGAGEAKICTSVPFLDHMLDLFARHGLFNLQVDARGDIDIDFHHTVEDIGIVLGQALKEALGDKKGIRRYGQASVPMDETLASVAVDISGRPYLVYHVALPKVKIGEFDVELVREFFQAVVNNLGANIHVNVMYGDNVHHMVEACFKAF 171          
BLAST of DY259991 vs. ExPASy Swiss-Prot
Match: HIS7_NEIMF (Imidazoleglycerol-phosphate dehydratase OS=Neisseria meningitidis serogroup C / serotype 2a (strain ATCC 700532 / FAM18) GN=hisB PE=3 SV=1)

HSP 1 Score: 172.94 bits (437), Expect = 2.220e-42
Identity = 89/204 (43.63%), Postives = 123/204 (60.29%), Query Frame = 3
Query:  207 RRMNSLTTPRASLNPDGDSKHNNGSASTSSAVDSGRIGEVKRVTKETNVSVKINVDGSGVADSSTCIPFLDHMLDQLASHGLFDVHVRATGDIHIDDHHTNEDVGLAIGTALLQALGDRKGINRFGDFTAPLDEALIHVSLDLSGRPHLNYDLQIPTQKVGTYNTQLVEPLFQSLVNTSGMDPSIQQLAGKNSSHIIEATLKAF 818
            R+    T P  +    G ++     A T+SA     +  V R T ET ++V IN+DGSG +   T +PFL+HM+DQ+A HG+ D+ +   GD+HIDDHHT ED+G+ +G A+ QALGD+KGI R+G    PLDEAL  V +DLSGRP L Y+++     +G ++  L E  F  +VN S M   I  L+GKN+ H  E   KAF
Sbjct:   78 RKHRERTVPETAAESTGTAETQ--IAETASAAGCRSV-TVNRNTCETQITVSINLDGSGKSRLDTGVPFLEHMIDQIARHGMIDIDISCKGDLHIDDHHTAEDIGITLGQAIRQALGDKKGIRRYGHSYVPLDEALSRVVIDLSGRPGLVYNIEFTRALIGRFDVDLFEEFFHGIVNHSMMTLHIDNLSGKNAHHQAETVFKAF 278          
BLAST of DY259991 vs. ExPASy Swiss-Prot
Match: HIS7_NEIMB (Imidazoleglycerol-phosphate dehydratase OS=Neisseria meningitidis serogroup B GN=hisB PE=3 SV=1)

HSP 1 Score: 172.94 bits (437), Expect = 2.220e-42
Identity = 89/204 (43.63%), Postives = 123/204 (60.29%), Query Frame = 3
Query:  207 RRMNSLTTPRASLNPDGDSKHNNGSASTSSAVDSGRIGEVKRVTKETNVSVKINVDGSGVADSSTCIPFLDHMLDQLASHGLFDVHVRATGDIHIDDHHTNEDVGLAIGTALLQALGDRKGINRFGDFTAPLDEALIHVSLDLSGRPHLNYDLQIPTQKVGTYNTQLVEPLFQSLVNTSGMDPSIQQLAGKNSSHIIEATLKAF 818
            R+    T P  +    G ++     A T+SA     +  V R T ET ++V IN+DGSG +   T +PFL+HM+DQ+A HG+ D+ +   GD+HIDDHHT ED+G+ +G A+ QALGD+KGI R+G    PLDEAL  V +DLSGRP L Y+++     +G ++  L E  F  +VN S M   I  L+GKN+ H  E   KAF
Sbjct:   78 RKHRERTVPETAAESTGTAETQ--IAETASAAGCRSV-TVNRNTCETQITVSINLDGSGKSRLDTGVPFLEHMIDQIARHGMIDIDISCKGDLHIDDHHTAEDIGITLGQAIRQALGDKKGIRRYGHSYVPLDEALSRVVIDLSGRPGLVYNIEFTRALIGRFDVDLFEEFFHGIVNHSMMTLHIDNLSGKNAHHQAETVFKAF 278          
BLAST of DY259991 vs. ExPASy Swiss-Prot
Match: HIS7_NEIMA (Imidazoleglycerol-phosphate dehydratase OS=Neisseria meningitidis serogroup A GN=hisB PE=3 SV=1)

HSP 1 Score: 172.94 bits (437), Expect = 2.220e-42
Identity = 89/204 (43.63%), Postives = 123/204 (60.29%), Query Frame = 3
Query:  207 RRMNSLTTPRASLNPDGDSKHNNGSASTSSAVDSGRIGEVKRVTKETNVSVKINVDGSGVADSSTCIPFLDHMLDQLASHGLFDVHVRATGDIHIDDHHTNEDVGLAIGTALLQALGDRKGINRFGDFTAPLDEALIHVSLDLSGRPHLNYDLQIPTQKVGTYNTQLVEPLFQSLVNTSGMDPSIQQLAGKNSSHIIEATLKAF 818
            R+    T P  +    G ++     A T+SA     +  V R T ET ++V IN+DGSG +   T +PFL+HM+DQ+A HG+ D+ +   GD+HIDDHHT ED+G+ +G A+ QALGD+KGI R+G    PLDEAL  V +DLSGRP L Y+++     +G ++  L E  F  +VN S M   I  L+GKN+ H  E   KAF
Sbjct:   78 RKHRERTVPETAAESTGTAETQ--IAETASAAGCRSV-TVNRNTCETQITVSINLDGSGKSRLDTGVPFLEHMIDQIARHGMIDIDISCKGDLHIDDHHTAEDIGITLGQAIRQALGDKKGIRRYGHSYVPLDEALSRVVIDLSGRPGLVYNIEFTRALIGRFDVDLFEEFFHGIVNHSMMTLHIDNLSGKNAHHQAETVFKAF 278          
BLAST of DY259991 vs. ExPASy Swiss-Prot
Match: HIS7_NEIM0 (Imidazoleglycerol-phosphate dehydratase OS=Neisseria meningitidis serogroup C (strain 053442) GN=hisB PE=3 SV=1)

HSP 1 Score: 172.94 bits (437), Expect = 2.220e-42
Identity = 89/204 (43.63%), Postives = 123/204 (60.29%), Query Frame = 3
Query:  207 RRMNSLTTPRASLNPDGDSKHNNGSASTSSAVDSGRIGEVKRVTKETNVSVKINVDGSGVADSSTCIPFLDHMLDQLASHGLFDVHVRATGDIHIDDHHTNEDVGLAIGTALLQALGDRKGINRFGDFTAPLDEALIHVSLDLSGRPHLNYDLQIPTQKVGTYNTQLVEPLFQSLVNTSGMDPSIQQLAGKNSSHIIEATLKAF 818
            R+    T P  +    G ++     A T+SA     +  V R T ET ++V IN+DGSG +   T +PFL+HM+DQ+A HG+ D+ +   GD+HIDDHHT ED+G+ +G A+ QALGD+KGI R+G    PLDEAL  V +DLSGRP L Y+++     +G ++  L E  F  +VN S M   I  L+GKN+ H  E   KAF
Sbjct:   78 RKHRERTVPETAAESTGTAETQ--IAETASAAGCRSV-TVNRNTCETQITVSINLDGSGKSRLDTGVPFLEHMIDQIARHGMIDIDISCKGDLHIDDHHTAEDIGITLGQAIRQALGDKKGIRRYGHSYVPLDEALSRVVIDLSGRPGLVYNIEFTRALIGRFDVDLFEEFFHGIVNHSMMTLHIDNLSGKNAHHQAETVFKAF 278          
BLAST of DY259991 vs. ExPASy Swiss-Prot
Match: HIS7_NEIG1 (Imidazoleglycerol-phosphate dehydratase OS=Neisseria gonorrhoeae (strain ATCC 700825 / FA 1090) GN=hisB PE=3 SV=2)

HSP 1 Score: 172.94 bits (437), Expect = 2.220e-42
Identity = 89/204 (43.63%), Postives = 123/204 (60.29%), Query Frame = 3
Query:  207 RRMNSLTTPRASLNPDGDSKHNNGSASTSSAVDSGRIGEVKRVTKETNVSVKINVDGSGVADSSTCIPFLDHMLDQLASHGLFDVHVRATGDIHIDDHHTNEDVGLAIGTALLQALGDRKGINRFGDFTAPLDEALIHVSLDLSGRPHLNYDLQIPTQKVGTYNTQLVEPLFQSLVNTSGMDPSIQQLAGKNSSHIIEATLKAF 818
            R+    T P  +    G ++     A T+SA     +  V R T ET ++V IN+DGSG +   T +PFL+HM+DQ+A HG+ D+ +   GD+HIDDHHT ED+G+ +G A+ QALGD+KGI R+G    PLDEAL  V +DLSGRP L Y+++     +G ++  L E  F  +VN S M   I  L+GKN+ H  E   KAF
Sbjct:   76 RKHRERTVPETAAESTGTAETR--IAETASAAGCRSV-TVNRNTCETQITVSINLDGSGKSRLDTGVPFLEHMIDQIARHGMIDIDISCKGDLHIDDHHTAEDIGITLGQAIRQALGDKKGIRRYGHSYVPLDEALSRVVIDLSGRPGLVYNIEFTRTLIGRFDVDLFEEFFHGIVNHSMMTLHIDNLSGKNAHHQAETVFKAF 276          
The following BLAST results are available for this feature:
BLAST of DY259991 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
HIS7_POLSJ1.246e-4247.93Imidazoleglycerol-phosphate dehydratase OS=Polarom... [more]
HIS7_RALPJ1.248e-4247.93Imidazoleglycerol-phosphate dehydratase OS=Ralston... [more]
HIS7_DIAST1.624e-4245.76Imidazoleglycerol-phosphate dehydratase OS=Diaphor... [more]
HIS7_ACISJ1.624e-4245.76Imidazoleglycerol-phosphate dehydratase OS=Acidovo... [more]
HIS7_GEOMG1.700e-4247.34Imidazoleglycerol-phosphate dehydratase OS=Geobact... [more]
HIS7_NEIMF2.220e-4243.63Imidazoleglycerol-phosphate dehydratase OS=Neisser... [more]
HIS7_NEIMB2.220e-4243.63Imidazoleglycerol-phosphate dehydratase OS=Neisser... [more]
HIS7_NEIMA2.220e-4243.63Imidazoleglycerol-phosphate dehydratase OS=Neisser... [more]
HIS7_NEIM02.220e-4243.63Imidazoleglycerol-phosphate dehydratase OS=Neisser... [more]
HIS7_NEIG12.220e-4243.63Imidazoleglycerol-phosphate dehydratase OS=Neisser... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAP10YN21FM1 Fruit-TF Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY259991 ID=DY259991; Name=DY259991; organism=Citrus clementina; type=EST; length=917bp
GCTGCGTTTTGGCATATAGCCGTGTTGGCGTTGCTACTCTCTCTGCGACA
TTGGAAACGATAGTGTGTAAAATGGAGCTCTCGGTCCCAGCTCGCCTTGT
TCACCTTTCAATCTCGTCCACGTCCTCACGCCGGCTCCTCGTTAAACCAA
AAACCAATCTCTCTCGTAAACTTCTCCCCATCTCCACACAATACTGCTCC
TCAACGCGCCGCATGAACTCCCTCACAACACCACGCGCCTCTCTAAACCC
AGACGGCGACAGCAAACACAACAACGGGTCCGCCTCAACTTCCTCTGCCG
TCGATTCTGGTCGAATTGGGGAAGTGAAAAGAGTCACGAAAGAGACCAAC
GTTTCTGTGAAGATTAACGTCGATGGCTCTGGCGTTGCTGATTCATCCAC
TTGCATTCCCTTCCTAGATCACATGCTTGATCAACTGGCTTCGCACGGGC
TATTTGATGTGCACGTGAGGGCAACCGGAGACATTCACATTGATGATCAT
CATACCAATGAAGACGTTGGGCTTGCCATTGGCACGGCATTGCTGCAAGC
TCTTGGTGATAGGAAAGGAATTAATCGGTTTGGTGATTTTACAGCTCCTC
TTGATGAAGCTTTGATTCATGTTTCATTGGATTTATCTGGACGGCCACAT
TTAAATTATGATTTGCAAATTCCCACACAGAAAGTTGGAACTTACAACAC
TCAATTGGTGGAACCACTTTTCCAATCCTTGGTGAACACTTCTGGGATGG
ACCCTTCCATTCAACAGCTTGCTGGAAAAAATTCCTCTCACATTATTGAG
GCAACCCTCAAAGCTTTTTGCTAGGGCTCTCCGAAAAGCAACAAAATTAG
GACCCCGTCGCCGTGGAAATATACCCAACCTCAAAGGGGGTTCTCCAACA
TCTTGGAATCTCGACGG
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